ChloroMitoSSRDB 2.0 - Database of Microsatellites from Chloroplast & Mitochondrial Genomes

All Imperfect Repeat Motifs of Chloroplast Genomes

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G	A	C	T	AG	TC	GC	CA	CG	CT	TA	GT	AT	GA
TG	GCA	AAG	TTA	TGC	CGT	TTG	ACA	GTG	AGT	CAA	AGA	TAA	AAC
ACG	GAT	CTC	AGC	AGG	GAC	TAT	ATA	CTT	GGT	CTG	CTA	ACC	GCC
TGG	CGA	CAG	ACT	CCT	TCA	TGT	CGG	CAT	GAG	GTC	ATG	TAC	TCC
GCT	CAC	GAA	TAG	GGC	CCA	ATC	AAT	TGA	GTT	TCG	CCG	ATT	CGC
GTA	TTTA	CAAA	TGAG	GCAC	GGAT	CGGG	CCGG	AATT	AATA	GATA	TTCT	CGCC	CCTC
GACT	AACC	ACGG	ACGT	TTAC	GTAA	CTTA	TTGT	GTGG	CGTT	ACGC	GGGC	TATT	TAGT
GGAG	AACG	GTTA	CGAG	GTCT	ACTT	CCGT	GAGC	CTGC	CGAC	GCAA	GTAC	AGGG	ACCT
GCGA	GGCG	TTAA	AAAC	GCAT	CAAC	AACA	CGTG	CACC	TCTG	CGGC	TTCA	TTAT	GATT
GTGA	ACTA	GAAC	CGTC	CCAT	TCGC	ACAT	GTTG	ATAC	GAGG	CCAC	GTGC	CGAA	GGGT
TGGT	TAGA	ATTT	ATCG	ATCA	AAGG	ATCT	CAGC	GCGG	GTCA	CTTG	TACT	AAGA	GCCA
ACCG	CAAT	ATGT	ATAG	TGAT	TAAC	CTGG	GTTC	CTCG	AGAC	AGCG	TCCT	TGAA	AAAG
ACAG	AGTT	GAAT	GGAA	TTTG	GGTT	TATC	GTAG	CAGA	ATTA	TAAA	CATT	GTAT	TCTT
AACT	TCAT	CTCA	AATC	AGGA	TGGG	GGAC	CGGA	CCGA	GGTC	AAAT	CTTT	TTGC	GCTT
CTAA	CTCC	TCAA	ACAA	GATG	TCTA	TCCC	TGCT	CCTA	AGTA	TCAG	TTTC	AGGT	AGAA
TTAG	TGGC	TGAC	CCGC	GCTG	GCCG	AATG	ATAA	TATG	GCCT	TTCG	CAGT	TAAG	GAAG
TCCG	TTGG	ATGG	AAGT	ACTC	TACA	CTAC	AGTG	CCCA	GGCT	TAGC	CGAT	AGCC	CTTC
ACCC	GGTA	TGGA	TCGT	CGTA	TCGG	CGCT	TGCA	CCTT	TACG	TGTT	CCTG	GACC	CCCG
CATA	TCGA	CTGA	CCCT	AGTC	CAGG	CTAG	TAAT	ATGC	CTAT	CTGT	GACA	GCTC	TGCC
ATCC	ATGA	ATTC	TGTA	TTCC	GGCA	AGGC	CCAA	TCAC	ACCA	CATC	TAGG	AGCA	ATTG
GGGA	TCCA	GCTA	CATG	GATC	TACC	GCCC	TTTTG	AACAA	AAAAC	AGCGA	TAAGA	TTCTA	CACTT
GTTCA	ATCAT	AGGTA	TCCCC	AGTAC	TATAC	GATTG	CTTCA	TTAAG	TGGAA	TTTCT	TTGCT	AAAGC	CGATT
ACTTA	TGTGC	GTTTA	CATTC	GAATT	TTCAG	AATGT	GTTAT	GTCCG	GATAC	GCAGT	CTATA	TCAGA	TTTAT
TCGGT	TCCTT	TCCAA	GCAAT	GTAGA	TACCT	ATACA	TCTGA	TTAAC	GAATC	ACATA	GGTAA	TAGGC	ACCAT
TATTC	ATATT	CATAC	TCATT	TATAA	TGCAA	AACGG	GACCG	TTAGG	TATGT	CCTCT	ATCCC	TATAG	CAGAA
TTTCA	ATTAA	TATTT	AATTC	CCTTT	GTATT	TTGGA	ATCTA	AGAAC	ACGGA	AATGC	CCTTC	ATTCC	TCCAC
TTGAA	CAAAA	TTCAC	TCTAT	ATACC	TTCAA	GTAAA	GTTAA	AAGGG	AATAA	GCAAA	TTCGG	TTGCA	CATTA
TTACG	AAGCA	TACAC	AACAT	TGGGC	ATCTG	AATAG	ATTTT	TAATC	TCCGA	TTGGT	AGTGC	CATTT	TATGA
TTTGG	TAAGT	ACTGA	TTTAA	CGCAA	CTACT	ACAAA	AATTG	AATGA	GATCG	AAGGA	TTAGA	AGATA	GAATG
GTTCT	TAAAG	AAAAG	CCAAA	CTCTT	GAGAT	TAGTT	CAAAT	AAGAA	TTTCC	TATTA	ATATA	AAGTA	TCATA
TAGGT	TGGTA	CTAAG	TTACC	AACAG	ATTAT	TCTCT	ATCCA	TAGAG	TCCTC	GAGGT	CTAAT	ATTTG	GGAGA
ACTCT	TCTGT	CAAAC	GCTCT	ATGAA	TAGAA	ATATG	TCGAA	AGTTA	GATCA	GTAAT	GGATT	CAAGA	AAACA
CACCC	AATTT	GTATG	AAAAT	CTTGA	ATAAA	ACTTT	CCTAT	GATTT	AAAGG	GCCCC	ACATC	AGCAT	GATCT
CAATC	ATTCA	TACAG	TTGTT	TCACC	TTGAC	CGGAA	TGTCG	TACTA	ATGTA	CGTTT	AGCGT	TAATG	ATTTA
CCGAA	TGTTT	TAGTA	TACTT	CTTAG	AATCC	CGTAA	ATCTC	TACCA	CTTTA	TTAAT	ATGTT	GGAAT	ATCAA
AAACC	CTGCT	TTACT	GGCGT	CCTCC	AGCCC	ATCCT	TGTGG	GAAGA	CAGAT	CATAT	CGTAG	CCCTC	AGCAC
TTTGC	TGTAT	ACAGT	CATTG	GAGGA	TTATC	TTGTA	GAGAA	ATAGT	CGGAT	TAGCT	TATAT	CAATG	TAAAT
ATTGA	ATAAG	CTATT	ACCGG	GATAA	TTCGA	GTTTC	ACAAT	TCAAT	ACCGA	ATTAC	TTACA	GATGG	ACTAA
AGAGA	GTCTT	TATCT	GTCAA	GATCC	AATTA	TGAAT	ATCTT	AAACT	ACTAT	CTATC	ATAAT	TTTCG	TACAT
TTATA	TCCGG	GCCTT	GGGAA	GTATA	AATCT	TGTTA	GGGTT	CAACA	TAACT	CCGGA	GAAAA	TGAAA	AAGTG
AAGAT	CTTTC	CCAAT	CCAAC	TTCCT	TGGAT	AATCA	CCGTT	CATCA	TACGG	AACTA	CTGTT	AGAGT	AGTTT
AGAAA	ACGTA	TGAAG	AAATG	TATGG	CGATC	TTGCC	CTAGA	GATTA	CTTTT	GTTTT	TTTGA	GGGGA	GATGT
CGAAT	AGTGA	TATTG	AACGA	GATAG	TGTGT	GGATA	CAATT	AGTAA	AGATG	TTTTC	TTCAT	AGAAT	CTTAA
TAAAC	ACGAG	ATGCT	CTGAT	GATTC	AACGT	GGTAG	GCCAA	TTATG	CCCTA	TATCC	TACAA	TCAAG	CGATA
AAATA	GACTT	ATTGT	AGGGA	TGCAT	TGATC	CTCAA	AAGTT	AGATT	TCTCA	TAATA	CTTCT	ATGAT	CATCT
TGCTT	ATTAG	TAAGC	ATTGG	CTAAC	CCATA	AAGGT	TTAGT	GAAGG	CGAAG	TAGGA	ATTGC	GAAAT	TACCC
GCCCT	GGAAA	CTTGT	GGATG	TCATC	TTAAA	CTTGC	GGTTT	AGGTT	TTTTA	GGGAG	CATAA	AAATC	ACCTA
TGGCC	GGATC	ATATC	TGTAC	TAGAT	CTTAC	AACTT	AGCAA	TCTTA	TCCTA	TCTTT	TCTAA	TAAAA	GAAAG
CTTAT	TTGAT	TTTAG	TCAAC	TTGTG	CCTAA	CTAAA	TCAAA	ATACT	TCCCT	AAATT	AATAT	TTTGT	CCTGG
AGTAG	TCCAT	TGTAA	TCCGT	AGATC	TTCGC	AGTGT	GCTGG	GTGTG	TTATT	TTTAC	AAAGT	GGTAT	TCGAT
TCCTG	ATAGA	ATTCG	TCTTG	TTCCA	TGAGA	TCTAAT	AATATT	TACGTT	CATTTT	TTTGTT	AAGATA	ATATGT	TTTTAA
GAGAAT	TATGTA	ATAGAT	TCAATT	TTGTTT	TCACTA	AAAATC	TTGAAG	TTAAAG	TAGATA	ATACTT	TAGAAG	TTATGA	TTTCTT
ATATGA	AGGTGT	AAATTG	CATTCA	ATTAAG	TATTTC	GGAACA	ATTATC	TTCTCC	GCATAA	TGTATA	TCCTAC	TAACAA	ATGTAC
CTACTT	AATCCT	AATTGG	TCCAAT	TAATAG	ATAAAA	TGTAAT	CACAAA	TTAATA	ATATTT	ACCAAC	AAGAGG	CCTATT	GTTATT
GATTAA	ATACCA	AGTTGG	TTGTTA	TCAGAA	TCAATA	TGGAGT	TCAAAA	TTTTGA	AGAAAT	TTTTCC	CTTATT	GTAAAA	TCTTAT
TTGATT	TTCAGA	TACCAA	AAAGCA	TACACC	CTTCAA	GAAGGG	TAAGAG	ATCGAT	ATAGGA	TACAAA	TCCCCC	CTCAAA	TAAAAA
TATAGA	CGAAAA	TTTGTA	TCTTCA	TATGAA	TAAATT	GTTTTT	ACATAC	AGATAA	ATTAGA	GTCCAG	CATAGT	AATAGA	CATTCT
CTATTC	ATTCTA	AAAGGA	GTTTGT	ATTGTA	TTACCT	GATTTG	CAAAAG	TAGAGC	TCTTTT	TAGATT	TATTCA	CATAGG	TAAATA
ACTATA	ATAAGA	TAAATG	ACTTAA	ATGAAT	GTCTCT	AGCTAA	CTATAA	ACGTTA	GGCAAT	TTCCTA	CTACCT	ACTTTG	CAAATA
CCTTTA	GATGAG	GGAATA	ATAGAA	TAAAAT	AAAAGC	TTTCTA	CTCCTT	TTAGAA	TATAAT	AGTATT	TTTTGT	ACAAAT	TAAATC
ATCCTT	CAATAA	CTTTCT	GAAAGA	CTTTTA	TAGTTT	TTAATG	CCTTCC	CTTTAT	AATAAC	GCTTGC	ACGGAG	TCAAAG	TTTTTC
TTGGGG	TCTTTA	ATTTAA	ATACAT	CTATAT	TTTTGC	CTTGAT	TCATTT	ATCGTC	TCCAAC	TCCCCA	GAATAG	TCTTCC	CCAACA
TACTAT	TCGAAA	TAGGAA	TGGCTA	CTAGAA	TACTTT	TTAACA	AATAAA	AAACAA	GAAATT	GTTCTT	ATAAGC	TAGAAA	ATCATA
TGATTT	GTTCCA	AATACA	TACTCT	CAAATG	TCAGAG	TAAAAC	CTTGTT	AGATAT	CGTCAT	TATTCC	CTGCCG	TTGGAA	ATGTTA
AAATAG	TCCATA	ATGAAG	ATAAAT	ATCTTC	CCAATG	TTTACT	TTATCA	AGTCAA	ACAAAG	CCCCTT	AATACT	ACTGAA	TATCAA
AGGATT	TTGAAA	ATAACA	AAAATG	TTCAAA	TCCTTA	TTCTAT	AATTTC	AATATA	GATATT	TTTAAT	GTATTT	AATAAG	GATAAG
ATAACC	CAAGAA	ATCCAT	AATGAT	TGACAA	GAGCAG	ATGTGA	TTTCCT	AATGTT	ACAAAA	TTTCTC	TATTGA	AATTTT	GAATCA
CTATCT	AATTGA	TGATAT	GAAATA	TCATAA	AGAGAC	TGATCA	ATACTA	TATAGT	CTAGTT	TCTTTC	GGAAAG	CTACAT	TTGTAT
CAAATT	TGATAG	TTTGCT	AAAAAG	GATCTT	GGAGGG	ATAAGG	GTAAGA	ATATTA	TATATC	TTTCAT	ATGGAT	TATAAA	TCATTC
ATGTAG	TTTATG	CATATT	CATTTC	AGATTT	AAACTG	AACTTA	TTAACG	AGTTTC	GTGCAA	ACATAT	CAAAAA	TCCTTT	ACACCT
CTGCAC	ATCAAT	AAATGA	TGCTAT	TCCTTC	TATAGC	AATGCT	TCTTCG	TTCATT	AAAACG	CCAATT	ATATAC	GAAAAT	TTCCTT
ATAAGT	TCCATT	AAAAGA	CCTTTT	GAAGGA	AGGGGA	TATCTA	TTAGTA	TTTATT	TCCCCT	TCATAT	TTTTAT	AATCCA	GGATTT
TGTAGT	ATATTC	TCCTCT	ATATAA	AGGATA	CGTATA	TAGGGA	TCGACT	ACGTAA	AGTCTA	CTGAAT	AAGTAC	GGTTCC	ATTTCA
AAATTA	ATTTTG	AGCAAA	TAATTA	TCTATA	GGCTTT	AACCTC	ATTCAT	TAGAAT	ATACAG	ATTGAT	CATCCT	AAGCTA	GGAAAA
CTATTA	CTCTTT	ACAAGA	AGCAAC	TTTAAC	CTATTT	AAATGC	CTTCAT	ACTTGC	TATCAT	GAACCC	ATAGGT	CAATTA	GAATGG
AAATAT	TATAAC	TGAAAA	TATTAA	TGTTGA	AGTTAT	TCTCTA	TAACTT	TAGTAT	TTCCTC	CTAAAA	ATTAGC	CATAAA	TTACAA
AGAGTT	TTCGTT	GTTGCG	TACCTA	CTTTTC	GTTAAA	AAAAAC	GAAAAA	AGAGAA	TCTATC	ATTTCG	TAAACA	CTTATA	TACATA
GAATTG	TATTCT	TTACTT	AATCTA	ATCCAA	ATAAAG	CGAAAT	GAAGAG	AGAACT	TGAATA	ACAACC	CGAAGA	CTATAC	AAGCAA
TTTCAG	TGACTT	GACAAA	TATACA	CAAGCC	TGAATT	ATTATA	CAATAC	ATTCGA	TAGTAA	TAATCT	GCATTA	GAAGCG	CGTTAA
GACTTT	CTCGTA	TATTGT	CGATTA	TGGCAA	ATTTTT	ATTTTC	TATATG	ATCTAT	AAAATT	ATATAG	TTAATT	AATTAG	GCCAAA
CATTAA	CATTTA	GATTAG	TTCTAC	ACTTAG	CAATAG	AAACTA	AGATAG	TTAAAC	ACAGAA	TTCCAA	AGCCAC	TTTCGA	TCATCT
AGAAAA	ATTCAA	TTAAAA	TTATAA	GTGAAA	ACAATA	GATTTA	CAAAAT	AGAGCA	CTAAGA	AGTTTT	TGCACC	AATCGA	ATTTGG
ATTCCG	AAATCT	CCGGAA	TTTCAC	CAAGAT	CCCTCC	GCAGCT	TTATTT	GTTATC	AAAGAA	GGTTCG	GATTTC	AATTTA	TTATTG
GTTGGT	GTGACG	GCTTTA	TTATGT	ATTTAG	CTAACG	TCGAAT	CTTTAG	AAATCA	CAAATC	GGAGAA	CGGCAA	AATGAA	CAAAAC
TAGCTG	AAAACA	AAATAA	GATGGA	GGGAGG	TAAAGT	TATTTT	ATTAGT	ACTCTT	ATTTTA	ACTTCT	AAAGAT	GTATTA	AATTCA
AGGAAG	ACTAAA	TTAGAT	GCTTCA	AAGTTT	GCAAAA	CCTCCA	CTCAAG	TGCAAT	GAGAAA	ACGGAA	GAAAAC	TTCTTT	ATCAAA
TTCATA	CTTCTA	CAGGAA	ATTACT	CATATA	AAGAAT	TTAAAT	TCTGGT	GTTTAT	ATTACA	AACAGG	AAGGAA	CACATA	GTAATA
CTCTTC	ATAGTG	TTTCCG	CAATGG	GAACTA	CCGTCG	TAATTT	GTTCGG	ATTCTT	AATTAT	ACAGTA	GGATAA	ATATCT	GGATAT
TAAGAT	TAAACT	AGTGAT	GCAATA	TTCTAA	TGTTTA	CGCTTC	TAAGTA	AACTAT	AAAGTA	CTGTAT	CCTCTT	AACAAA	CCAAAT
AAGAAA	TAACAT	TAAGAA	TCAACA	TAATTC	TTCAAT	ATACAA	AATTCT	ATGTAT	CCAACT	TATCAC	GAATGA	AGTCGA	CATACT
TCATCC	TCTTGT	AGAACA	CCCGCT	ATTTGA	TTATTC	GAATAA	TAATAT	AAAATA	TTTCGT	AAGTCA	ATATCG	AAATAC	TAACTA
TTGGAT	GATAAA	TAGTAC	GAGATA	CTTTTG	TATCTC	AGATTG	GATTAT	ACTAAG	ATTGAA	CTTTTT	TTTTTG	TAATGA	TAAAAG
TACTTA	TCTATT	CAAACA	TATCGT	TTCGAA	TTAATC	CAGGTC	GAATTC	CTCTTG	AAACTT	CAAAGA	CAATAT	TAATCA	TAATCC
TTCTGT	AAAAAT	TATTTG	ATATGG	AGAAAG	TTATAT	TAGTTA	GGGGAA	GGTTAT	TGCTAA	CTAATG	ATCTTT	CTAAAG	ATCGAA
GAAGTT	TACTGA	TACACG	TACTTC	TTCATC	GTTTCC	AAATTT	TCTCAT	TAAAGA	AGAATT	TGCTTT	TCATGT	GGGAAA	CTTTGA
GGATGA	TAATTG	TATAAG	TGATTA	TACTAG	GATCAT	TACCTT	GTATAA	CAATTC	TCTTAA	TCCTAA	GTTGGC	AGATGT	AATGCA
TTTAAA	GAATTT	TGTTTT	AAGTAT	GATATA	TTTACA	ATTTAT	TTACTA	AGAATG	TATACT	ATCTGA	TTAGTT	CCTATA	TCAAAT
AACATA	TTTTAC	ATGCTA	TTTAGT	GAAAAG	AATTCG	CTAATT	TCCATC	ATATTG	ATTAAT	AATATG	ATCTTA	AGTAAT	ATTAAA
TTTTAG	TTTCAA	GACCTG	AAATTC	AGAATA	AGTAGA	AGTATA	GAAGTC	TTAAGA	TTTCTG	AGATTA	CCGCTG	-	-

ChloroMitoSSRDB 2.0 Webserver cum Database of Cholorplast and Mitochondrial Microsatellites

All Imperfect Repeat Motifs of Chloroplast Genomes