ChloroMitoSSRDB 2.0 - Database of Microsatellites from Chloroplast & Mitochondrial Genomes

All Imperfect Repeat Motifs of Chloroplast Genomes

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G	C	A	T	AG	GC	TC	CA	CG	CT	TA	GT	AT	GA
AC	TGC	CGT	TTG	ACA	GTG	AGT	CAA	AGA	TAA	AAC	GGA	ACG	GAT
GAC	AGC	AGG	TAT	ATA	CTT	GGT	CTG	GCC	GCG	CTA	ACC	TGG	CGA
CCT	ACT	TCA	TGT	CGG	CAT	GAG	GTC	ATG	TAC	TCC	TCT	GCT	CAC
TAG	GGC	CCA	ATC	AAT	TGA	GTT	TCG	CCG	ATT	CGC	TTC	GTA	GCA
TTA	ACGG	ACGT	TGTC	GACT	AACC	GTGG	CGTT	ACGC	GGGC	TTAC	GTAA	CTTA	TTGT
TATT	TAGT	GAGT	ACTT	CCGT	GAGC	CTGC	CGAC	AACG	GTTA	CGAG	GTCT	ACCT	GGCC
GGCG	GCAA	GTAC	AGGG	CGTG	CACC	TCTG	CGGC	TTAA	AAAC	GCAT	CAAC	AACA	ACTA
CGTC	TTCA	TTAT	GATT	CCAG	GTGA	GAGG	CCAT	TCGC	ACAT	GTTG	ATAC	GGGT	ACGA
CCAC	GTGC	CGAA	CAGC	GCGG	TAGA	ATTT	ATCG	ATCA	AAGG	ATCT	GCCA	TGCG	ACCG
CTTG	TACT	AAGA	AGAC	AGCG	TCCT	CAAT	ATGT	ATAG	TGAT	TAAC	CTGG	GTTC	CTCG
AAAG	CAAG	ACAG	AGTT	CAGA	GAAT	GGAA	TTTG	GGTT	TATC	GTAG	CTCA	ATTA	TAAA
GTAT	TCTT	GTTT	AACT	TCAT	TGGG	GGAC	CGGA	CCGA	GGTC	AATC	AGGA	CTCC	AAAT
TTGC	GCTT	AGCT	CTAA	TGCT	CCTA	AGTA	TCAG	TCAA	ACAA	GATG	TCTA	TCCC	TGGC
CCGC	GCTG	GCCG	TTTC	AGGT	AGAA	GAAA	TTAG	TATG	GCCT	TTCG	AATG	ATAA	GTCC
CAGT	TAAG	GAAG	TACA	TTGG	ATGG	AAGT	ACTC	CGAT	AGCC	CTTC	CTAC	AGTG	CCCA
TAGC	TCGT	CGTA	TCGG	CGCT	AAGC	ACCC	GGTA	TGGA	CCTG	GACC	TGCA	CCTT	TACG
CTGA	CCCT	AGTC	CAGG	CCCG	ACTG	CATA	TCGA	GCTC	TGCC	CTAG	TAAT	ATGC	CTAT
GACA	GGCA	AGGC	TTGA	ATCC	ATGA	ATTC	TGTA	TTCC	TAGG	AGCA	CCAA	TCAC	ACCA
CATG	GATC	TACC	GCCC	ATTG	AGAT	GGGA	TCCA	GCTA	GGAT	CGGG	CCGG	TTTA	CAAA
GCAC	CGCC	CCTC	AATT	AATA	GATA	TTCT	TCCTT	TCCAA	GCAAT	GTAGA	TACCT	ATACA	TCTGA
GAATC	ACATA	GGTAA	TAGGC	ACCAT	TTTAT	GGTTC	TCGGT	CATAC	TCATT	TATAA	TGCAA	AACGG	GACCG
TATGT	CCTCT	ATCCC	TATAG	CAGAA	CACAA	TAATT	TATTC	ATATT	AATTC	CCTTT	GTATT	TTGGA	ATCTA
ACGGA	AATGC	CCTTC	ATTCC	TCCAC	TTTCA	ATTAA	TATTT	TTCAC	TCTAT	ATACC	TTCAA	GTAAA	GTTAA
ATTCT	TTGAA	CAAAA	TTCGG	TTGCA	CATTA	CTTCC	TTACG	AAGCA	TACAC	AACAT	TGGGC	ATCTG	AATAA
TAATC	TCCGA	TTGGT	AGTGC	CATTT	TATGA	GATAT	TTTGG	TAAGT	ACTGA	AATAG	ATTTT	ACAAA	AATTG
GATCG	AAGGA	TTAGA	AGATA	GAATG	AGCCG	GTTCT	TTTAA	CGCAA	CTACT	CCAAA	CTCTT	GAGAT	TAGTT
AAGAA	TTTCC	TATTA	ATATA	AAGTA	TCATA	TTCTG	TAGGT	TGGTA	CTAAG	TTACC	AACAG	TAAAG	AAAAG
ATCCA	TAGAG	TCCTC	GAGGT	CTAAT	ATTTG	GGAGA	ATGGT	ACTCT	TCTGT	CAAAC	GCTCT	ATTAT	ATATG
AGTTA	GATCA	GTAAT	GGATT	CAAGA	AAACA	AATAC	CACCC	ATGAA	TAGAA	ATAAA	ACTTT	CCTAT	GATTT
GCCCC	ACATC	AGCAT	GATCT	AATTT	GTATG	AAAAT	CTTGA	ATTCA	TACAG	TTGTT	TCACC	TTGAC	CGGAA
TACTA	ATGTA	CGTTT	AGCGT	TAATG	CATCG	CAATC	CCGAA	TGTTT	TAGTA	TACTT	CTTAG	AATCC	CGTAA
TACCA	ATTTA	AAAGA	TTAAT	ATGTT	GGAAT	ATCAA	CTCCC	AAACC	CTGCT	TTACT	GGCGT	CCTCC	AGCCC
CTTTA	CAGAT	CATAT	CGTAG	CCCTC	AGCAC	CCTTG	TTTGC	TGTAT	TGTGG	GAAGA	CATTG	GAGGA	TTATC
GAGAA	ATAGT	CGGAT	TAGCT	ACAGT	TTCTT	ATTGA	ATAAG	CTATT	ACCGG	GATAA	TTCGA	GTTTC	ACAAT
ACCGA	ATTAC	TTACA	GATGG	ACTAA	AGGAA	AGAGA	GTCTT	TATCT	TATAT	CAATG	TAAAT	GATCC	AATTA
ATCTT	AAACT	ACTAT	CTATC	ATAAT	GTCAA	TTATA	TCCGG	GCCTT	GGGAA	GTATA	AATCT	TGTTA	GGGTT
TAACT	TTTCG	TACAT	AAGAG	AAGTG	TGATT	AAGAT	CTTTC	CCAAT	CCAAC	TTCCT	TGGAT	AATCA	CCGTT
TACGG	AACTA	CTGTT	AGAGT	CCGGA	GAAAA	TGAAA	ACGTA	TGAAG	AAATG	TATGG	CGATC	TTGCC	CTAGA
GAACC	AGAAA	TTTGA	GGGGA	GATGT	CAATA	CGAAT	AGTGA	TATTG	AACGA	GATAG	TGTGT	GGATA	GATTA
GTTTT	TTCAT	AGAAT	CTTAA	TGATA	TAAAC	ACGAG	ATGCT	CTGAT	GATTC	AACGT	GGTAG	GCCAA	TTATG
CAATT	AGTAA	AGATG	TTTTC	CGATA	ATTTC	AAATA	GACTT	ATTGT	AGGGA	TGCAT	TGATC	CTCAA	AAGTT
TACAA	TCAAG	ATGAT	CATCT	TATCA	TGCTT	ATTAG	TAAGC	ATTGG	CTAAC	CCATA	AAGGT	AGATT	TCTCA
CTTCT	GAAGG	CGAAG	TAGGA	ATTGC	GAAAT	TACCC	TTCTC	GCCCT	GGAAA	CTTGT	GGATG	TCATC	TTAGT
GGGAG	CATAA	AAATC	ACCTA	CTCTA	TGGCC	GGATC	ATATC	TGTAC	TAGAT	CTTAC	AACTT	AGCAA	TTAAA
GGTTT	AGGTT	TCTAA	TAAAA	GAAAG	AACTC	CTTAT	TTGAT	TTTAG	TCAAC	TTGTG	CCTAA	TCTTA	TCCTA
ATACT	TCCCT	AAATT	AATAT	TTTGT	CCTGG	TAACA	AGTAG	TCCAT	TGTAA	TCCGT	AGATC	TTCGC	AGTGT
GTGTG	CTAAA	TCAAA	GGTAT	TCGAT	TTCCC	TCCTG	ATAGA	ATTCG	TCTTG	TTCCA	TGAGA	TTATT	TTTAC
AGCGA	TAAGA	TTCTA	CACTT	CGAAA	GTTCA	ATCAT	AGGTA	TCCCC	AGTAC	TATAC	GATTG	CTTCA	TTTTG
AAAAC	TTGCT	AAAGC	CGATT	GAATA	ACTTA	TGTGC	GTTTA	CATTC	GAATT	TTCAG	AATGT	GTTAT	GTCCG
GCAGT	CTATA	TCAGA	TTAAG	TGGAA	TTTCT	AATTGG	TCCAAT	TAATAG	ATAAAA	TGTAAT	CACAAA	TTAATA	ATATTT
AAGAGG	CCTATT	GTTATT	TCTTAG	GATTAA	ATACCA	AGTTGG	TTGTTA	TCAGAA	TCAATA	TGGAGT	TTTTGA	AGAAAT	TTTTCC
GTAAAA	TCTTAT	GGAGTG	TTGATT	TTCAGA	TACCAA	AAAGCA	TACACC	CTTCAA	GAAGGG	TAAGAG	ATCGAT	ATAGGA	TACAAA
TCAAAA	TATAGA	CGAAAA	TTTGTA	TCTTCA	TATGAA	TAAATT	GTTTTT	ACATAC	AGATAA	ATTAGA	GTCCAG	CATAGT	AATAGA
GAAATG	CTATTC	ATTCTA	AAAGGA	GTTTGT	ATTGTA	TTACCT	GATTTG	CAAAAG	TAGAGC	CTCAAA	TAAAAA	TTTTCT	TAGATT
CATAGG	TAAATA	ATTTCT	ACTATA	ATAAGA	TAAATG	ACTTAA	ATGAAT	GTCTCT	AGCTAA	CTATAA	ACGTTA	GGCAAT	TTCCTA
ACTTTG	CAAATA	TGAAAT	CCTTTA	GATGAG	GGAATA	TCTTTT	TTTCTA	CTCCTT	TTAGAA	TATAAT	AGTATT	TTTTGT	ACAAAT
TATGAT	ATCCTT	CAATAA	CTTTCT	GAAAGA	CTTTTA	TAGTTT	TTAATG	CCTTCC	CTTTAT	AATAAC	GCTTGC	ACGGAG	ATAGAA
AAAAGC	TTTTTC	ACTAAT	TTGGGG	TCTTTA	ATTTAA	ATACAT	CTATAT	TTTTGC	CTTGAT	TCATTT	ATCGTC	TCCAAC	TCCCCA
TCTTCC	CCAACA	GTGATG	TACTAT	TCGAAA	TAGGAA	TGGCTA	CTAGAA	TCAAAG	TTAACA	AATAAA	AAACAA	GAAATT	GTTCTT
TAGAAA	ATCATA	AGTAAA	TGATTT	GTTCCA	AATACA	TACTCT	CAAATG	TCAGAG	TAAAAC	CTTGTT	AGATAT	CGTCAT	TATTCC
TACTTT	AGGAAA	AAATAG	TCCATA	ATGAAG	ATAAAT	ATCTTC	CCAATG	TTTACT	TTATCA	AGTCAA	ACAAAG	CCCCTT	AATACT
TATCAA	TTTGAC	AGGATT	TTGGAA	ATGTTA	TTCAAA	TCCTTA	TTCTAT	AATTTC	AATATA	GATATT	TTTAAT	GTATTT	AATAAG
ATTTAC	ATAACC	CAAGAA	ATCCAT	AATGAT	TGACAA	GAGCAG	ATGTGA	TTTCCT	TTGAAA	ATAACA	AAAATG	TTTCTC	TATTGA
GAATCA	TATATT	CTATCT	AATTGA	TGATAT	GAAATA	TCATAA	AGAGAC	TGATCA	ATACTA	TATAGT	CTAGTT	TCTTTC	GGAAAG
TTGTAT	GGAAAC	CAAATT	TGATAG	TTTGCT	AATGTT	ACAAAA	GATCTT	GGAGGG	ATAAGG	GTAAGA	ATATTA	TATATC	TTTCAT
TATAAA	TCATTC	TTATCT	ATGTAG	TTTATG	CATATT	CATTTC	AGATTT	AAACTG	AACTTA	TTAACG	AGTTTC	GTGCAA	ACATAT
TCCTTT	ACACCT	TTTTTA	CTGCAC	ATCAAT	AAATGA	TGCTAT	TCCTTC	TATAGC	AATGCT	TCTTCG	TTCATT	AAAACG	CCAATT
GAAAAT	TTCCTT	CTTATC	ATAAGT	TCCATT	CAAAAA	GAAGGA	AGGGGA	TATCTA	TTAGTA	TTTATT	TCCCCT	TCATAT	TTTTAT
GGATTT	ATCTAA	TGTAGT	ATATTC	TCCTCT	ATATAA	AGGATA	CGTATA	TAGGGA	TCGACT	ACGTAA	AGTCTA	CTGAAT	AAGTAC
ATTTCA	CTGTTT	AAAAGA	CCTTTT	AGCAAA	TAATTA	TCTATA	GGCTTT	AACCTC	ATTCAT	TAGAAT	ATACAG	ATTGAT	CATCCT
GGAAAA	TTATAG	CTATTA	CTCTTT	ACAAGA	AGCAAC	TTTAAC	CTATTT	AAATGC	CTTCAT	ACTTGC	TATCAT	AAATTA	ATTTTG
ATAGGT	CAATTA	GAATGG	TTTATA	AAATAT	TATAAC	TGAAAA	TATTAA	TGTTGA	AGTTAT	TCTCTA	TAACTT	TAGTAT	TTCCTC
ATTAGC	CATAAA	TTACAA	TATTAC	AGAGTT	TTCGTT	GTTGCG	TACCTA	CTTTTC	AGAGAA	TCTATC	ATTTCG	TAAACA	CTTATA
AATTTG	GAATTG	TATTCT	TTACTT	AATCTA	ATCCAA	ATAAAG	CGAAAT	GAAGAG	AGAACT	TGAATA	ACAACC	CGAAGA	CTATAC
GCGACG	GTTAAA	AAAAAC	GAAAAA	GACAAA	TATACA	CAAGCC	TGAATT	ATTATA	CAATAC	ATTCGA	TAGTAA	TAATCT	GCATTA
CGTTAA	TTGAAT	GACTTT	CTCGTA	TATTGT	TTTCAG	TGACTT	TATATG	ATCTAT	AAAATT	ATATAG	TTAATT	AATTAG	GCCAAA
CATTAA	CATTTA	GATTAG	TTCTAC	ACTTAG	CAATAG	AAACTA	AGATAG	TTAAAC	ACAGAA	TTCCAA	AGCCAC	TTTCGA	TCATCT
CGATTA	TGGCAA	ATTTTT	ATTTTC	ATTCAA	TTAAAA	TTATAA	GTGAAA	ACAATA	GATTTA	CAAAAT	AGAGCA	CTAAGA	AGTTTT
AATCGA	ATTTGG	GAGGAA	ATTCCG	AAATCT	CCGGAA	TTTCAC	CAAGAT	CCCTCC	AGAAAA	GGTTCG	GATTTC	AATTTA	TTATTG
GTTGGT	GTGACG	GCTTTA	TTATGT	ATTTAG	CTAACG	TCGAAT	CTTTAG	AAATCA	CAAATC	GGAGAA	CGGCAA	AATGAA	GCAGCT
GTTATC	AAAGAA	AAAACA	AAATAA	GATGGA	GGGAGG	TAAAGT	TATTTT	ATTAGT	ACTCTT	ATTTTA	ACTTCT	AAAGAT	GTATTA
AATTAA	AGGAAG	ACTAAA	TTAGAT	GCTTCA	AAGTTT	GCAAAA	CCTCCA	CTCAAG	TGCAAT	GAGAAA	ACGGAA	GAAAAC	CAAAAC
TAGCTG	TATTAG	TTCATA	CTTCTA	CAGGAA	ATTACT	CATATA	AAGAAT	TTAAAT	TCTGGT	GTTTAT	ATTACA	AACAGG	AAGGAA
GTAATA	CAACTT	CTCTTC	ATAGTG	TTTCCG	CAATGG	GAACTA	CCGTCG	TTCTTT	ATCAAA	GTTCGG	ATTCTT	AATTAT	ACAGTA
ATATCT	GGATAT	AGTGGA	TAAGAT	TAAACT	AGTGAT	GCAATA	TTCTAA	TGTTTA	CGCTTC	TAAGTA	AACTAT	AAAGTA	CTGTAT
AACAAA	CCAAAT	TCTCTT	AAGAAA	TAACAT	TAAGAA	TCAACA	TAATTC	TTCAAT	ATACAA	AATTCT	ATGTAT	CCAACT	TATCAC
AGTCGA	CATACT	ATGGTA	TCATCC	TCTTGT	AGAACA	CCTCTT	CCCGCT	ATTTGA	TTATTC	GAATAA	TAATAT	AAAATA	TTTCGT
ATATCG	AAATAC	TAACTA	AGAAGC	TTGGAT	GATAAA	TAGTAC	GAGATA	CTTTTG	TATCTC	AGATTG	GATTAT	ACTAAG	ATTGAA
TAATGA	TAAAAG	TATTTA	TACTTA	TCTATT	CAAACA	TATCGT	TTCGAA	TTAATC	CAGGTC	GAATTC	CTCTTG	AAACTT	CAAAGA
TAATCA	TAATCC	ATTTGT	TTCTGT	CTTTTT	TATTTG	ATATGG	AGAAAG	TTATAT	TAGTTA	GGGGAA	GGTTAT	TGCTAA	CTAATG
CTAAAG	ATCGAA	TCTGAA	GAAGTT	TACTGA	TACACG	TACTTC	TTCATC	GTTTCC	AAAAAT	TCTCAT	TAAAGA	AGAATT	TGCTTT
GGGAAA	CTTTGA	TTAAGT	GGATGA	TAATTG	TATAAG	TGATTA	TACTAG	GATCAT	TACCTT	GTATAA	CAATTC	TCTTAA	TCCTAA
AGATGT	AATGCA	GGATAC	AAATTT	TGTTTT	AAGTAT	GATATA	TTTACA	ATTTAT	TTACTA	AGAATG	TATACT	ATCTGA	TTAGTT
TCAAAT	GGTATA	AACATA	TTTTAC	ATGCTA	TTTAGT	TTTAAA	GAATTT	AATTCG	CTAATT	TCCATC	ATATTG	ATTAAT	AATATG
AGTAAT	ATTAAA	CTAGTA	TTTTAG	TTTCAA	GACCTG	AAATTC	AGAATA	AGTAGA	AGTATA	GAAGTC	TTAAGA	TTTCTG	AGATTA
GAAAAG	CATTTT	TTTGTT	AAGATA	ATATGT	TTTTAA	CTAATA	GAGAAT	TATGTA	ATAGAT	TCAATT	TTGTTT	TCACTA	AAAATC
TTAAAG	TAGATA	ATACTT	TAGAAG	TTATGA	TCTAAT	AATATT	TACGTT	ATATGA	AGGTGT	AAATTG	CATTCA	ATTAAG	TATTTC
ATTATC	TTCTCC	GCATAA	TGTATA	TCCTAC	TAACAA	ATGTAC	GAAGTG	CTACTT	AATCCT	TTTCTT	AAAAGG	-	-

ChloroMitoSSRDB 2.0 Webserver cum Database of Cholorplast and Mitochondrial Microsatellites

All Imperfect Repeat Motifs of Chloroplast Genomes