ChloroMitoSSRDB 2.0 Webserver cum Database of Cholorplast and Mitochondrial Microsatellites

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Chloroplast Motifs - Imperfect TAAAA Repeats

S.NoSequence IDMotifIterationsStartEndTract LengthSequence Name
1NC_009808TAAAA7885278856135 Ipomoea purpurea chloroplast
2NC_020795TAAAA511190111192525Chondrus crispus plastid complete genome
3NC_021426TAAAA511625311627523Trochodendron aralioides chloroplast
4NC_015113TAAAA411377211379120Anthriscus cerefolium chloroplast
5NC_016430TAAAA411550511552319Eleutherococcus senticosus chloroplast
6NC_017602TAAAA415691915693719Elaeis guineensis chloroplast
7NC_018113TAAAA4752337525321Gossypium robinsonii chloroplast
8NC_020146TAAAA4444464446419Equisetum hyemale chloroplast
9NC_020438TAAAA4456014561919Gonium pectorale chloroplast
10NC_020460TAAAA4602086022619Euglena viridis culture-collection ATCC:PRA110 chloroplast
11NC_020795TAAAA4600306004819Chondrus crispus plastid complete genome
12NC_001603TAAAA414076214078120 Euglena gracilis chloroplast
13NC_002694TAAAA420622520 Lotus japonicus chloroplast
14NC_006290TAAAA411498011499819 Panax ginseng chloroplast
15NC_008372TAAAA4489674898620 Stigeoclonium helveticum chloroplast
16NC_008535TAAAA44160418021 Coffea arabica chloroplast
17NC_009766TAAAA43232325221 Cuscuta reflexa chloroplast
18NC_009808TAAAA4472654728420 Ipomoea purpurea chloroplast
19NC_011600TAAAA4600696008921 Vaucheria litorea chloroplast
20NC_012224TAAAA4787877880519 Jatropha curcas chloroplast
21NC_013843TAAAA4604016042121 Vigna radiata chloroplast
22NC_014675TAAAA3241522416615Isoetes flaccida chloroplast
23NC_015308TAAAA3693936940715Hevea brasiliensis chloroplast
24NC_015402TAAAA3620146202714Ptilidium pulcherrimum chloroplast
25NC_015403TAAAA3647066472015Fistulifera sp. JPCC DA0580 chloroplast
26NC_015645TAAAA3337053371915Schizomeris leibleinii chloroplast
27NC_015894TAAAA3527535276614Wolffiella lingulata chloroplast
28NC_015899TAAAA3521305214516Wolffia australiana chloroplast
29NC_015899TAAAA3787067872015Wolffia australiana chloroplast
30NC_015996TAAAA3350943510815Pyrus pyrifolia chloroplast
31NC_016471TAAAA3302563027116Neottia nidus-avis plastid
32NC_016731TAAAA3125231253816Synedra acus chloroplast
33NC_016732TAAAA316110516111814Dunaliella salina chloroplast
34NC_016732TAAAA318106418107714Dunaliella salina chloroplast
35NC_016732TAAAA323445223446615Dunaliella salina chloroplast
36NC_016735TAAAA310889410890714Fucus vesiculosus chloroplast
37NC_016736TAAAA34265427915Ricinus communis chloroplast
38NC_018114TAAAA36679669214Erycina pusilla chloroplast
39NC_018114TAAAA38990900415Erycina pusilla chloroplast
40NC_018541TAAAA3585495856315Elodea canadensis chloroplast
41NC_020019TAAAA3186561866914Camellia sinensis chloroplast
42NC_020146TAAAA3441264414015Equisetum hyemale chloroplast
43NC_020319TAAAA310380810382114Cycas revoluta chloroplast
44NC_020362TAAAA3707887080114Heliconia collinsiana plastid
45NC_020364TAAAA311529711531014Pseudophoenix vinifera plastid
46NC_020438TAAAA3493594937214Gonium pectorale chloroplast
47NC_020438TAAAA3708097082315Gonium pectorale chloroplast
48NC_020438TAAAA310810510811915Gonium pectorale chloroplast
49NC_020438TAAAA312646412647815Gonium pectorale chloroplast
50NC_020460TAAAA3838618387616Euglena viridis culture-collection ATCC:PRA110 chloroplast
51NC_021111TAAAA3560125602615Cistanche deserticola chloroplast
52NC_021121TAAAA36256627116Ardisia polysticta chloroplast
53NC_021189TAAAA3746917470414Pyropia haitanensis voucher PH-38 chloroplast
54NC_021618TAAAA3541415415414Grateloupia taiwanensis plastid
55NC_021645TAAAA34459447214Glycine cyrtoloba voucher CSIRO:G1267 chloroplast
56NC_000925TAAAA3716707168314 Porphyra purpurea chloroplast
57NC_000925TAAAA314177414178815 Porphyra purpurea chloroplast
58NC_001319TAAAA345146515 Marchantia polymorpha chloroplast
59NC_001319TAAAA3141461416015 Marchantia polymorpha chloroplast
60NC_001319TAAAA3223342234916 Marchantia polymorpha chloroplast
61NC_001319TAAAA3351853519814 Marchantia polymorpha chloroplast
62NC_001319TAAAA310856610858015 Marchantia polymorpha chloroplast
63NC_001603TAAAA3729117292414 Euglena gracilis chloroplast
64NC_001603TAAAA3747567477116 Euglena gracilis chloroplast
65NC_001603TAAAA310243210244514 Euglena gracilis chloroplast
66NC_001603TAAAA310699310700715 Euglena gracilis chloroplast
67NC_001799TAAAA3281842819815 Toxoplasma gondii RH apicoplast
68NC_001865TAAAA3288722888615 Chlorella vulgaris chloroplast
69NC_001865TAAAA313250813252114 Chlorella vulgaris chloroplast
70NC_001879TAAAA38074808714 Nicotiana tabacum plastid
71NC_002202TAAAA3458194583416 Spinacia oleracea plastid
72NC_002202TAAAA311863011864415 Spinacia oleracea plastid
73NC_002652TAAAA3166851669915 Euglena longa plastid
74NC_002652TAAAA3357673578115 Euglena longa plastid
75NC_004115TAAAA3395913960414 Chaetosphaeridium globosum chloroplast
76NC_004799TAAAA314429414430815 Cyanidioschyzon merolae strain 10D chloroplast
77NC_004823TAAAA3105581057114 Eimeria tenella strain Penn State apicoplast
78NC_004823TAAAA3156041561714 Eimeria tenella strain Penn State apicoplast
79NC_005087TAAAA3489034891715 Physcomitrella patens subsp. patens chloroplast
80NC_007500TAAAA38074808714 Nicotiana sylvestris chloroplast
81NC_007602TAAAA38000801314 Nicotiana tomentosiformis chloroplast
82NC_007758TAAAA3161451615915 Theileria parva strain Muguga apicoplast
83NC_007758TAAAA3290812909515 Theileria parva strain Muguga apicoplast
84NC_007758TAAAA3303183033114 Theileria parva strain Muguga apicoplast
85NC_007758TAAAA3315543156815 Theileria parva strain Muguga apicoplast
86NC_007758TAAAA3330393305315 Theileria parva strain Muguga apicoplast
87NC_007942TAAAA3618936190715 Glycine max chloroplast
88NC_008101TAAAA312201012202314 Scenedesmus obliquus chloroplast
89NC_008101TAAAA313447213448615 Scenedesmus obliquus chloroplast
90NC_008101TAAAA313835413836714 Scenedesmus obliquus chloroplast
91NC_008101TAAAA314905914907214 Scenedesmus obliquus chloroplast
92NC_008114TAAAA3308143082714 Pseudendoclonium akinetum chloroplast
93NC_008114TAAAA310413510415016 Pseudendoclonium akinetum chloroplast
94NC_008114TAAAA313861013862314 Pseudendoclonium akinetum chloroplast
95NC_008117TAAAA3946139462816 Zygnema circumcarinatum chloroplast
96NC_008326TAAAA311691111692414 Liriodendron tulipifera chloroplast
97NC_008335TAAAA312825512826915 Platanus occidentalis chloroplast
98NC_008372TAAAA311729311730614 Stigeoclonium helveticum chloroplast
99NC_008457TAAAA312714812716215 Piper cenocladum chloroplast
100NC_008535TAAAA311813611815015 Coffea arabica chloroplast
101NC_008589TAAAA3170771709115 Thalassiosira pseudonana chloroplast
102NC_008589TAAAA3557405575415 Thalassiosira pseudonana chloroplast
103NC_008591TAAAA3639846399714 Agrostis stolonifera chloroplast
104NC_009573TAAAA38795880915 Rhodomonas salina chloroplast
105NC_009765TAAAA3446544466714 Cuscuta gronovii chloroplast
106NC_009808TAAAA3884128842615 Ipomoea purpurea chloroplast
107NC_010109TAAAA3340733408715 Lemna minor chloroplast
108NC_010433TAAAA3173921740615 Manihot esculenta chloroplast
109NC_010433TAAAA3186101862314 Manihot esculenta chloroplast
110NC_010442TAAAA313179413180815 Trachelium caeruleum chloroplast
111NC_010772TAAAA314747414748815 Heterosigma akashiwo chloroplast
112NC_011032TAAAA3748067481914 Brachypodium distachyon chloroplast
113NC_012052TAAAA3832908330415 Syntrichia ruralis chloroplast
114NC_012052TAAAA3979329794615 Syntrichia ruralis chloroplast
115NC_012097TAAAA3799898000315 Pycnococcus provasolii chloroplast
116NC_012099TAAAA3449364495015 Pyramimonas parkeae chloroplast
117NC_012099TAAAA3537715378616 Pyramimonas parkeae chloroplast
118NC_012099TAAAA3704407045314 Pyramimonas parkeae chloroplast
119NC_012224TAAAA3192401925314 Jatropha curcas chloroplast
120NC_012224TAAAA3770297704315 Jatropha curcas chloroplast
121NC_012903TAAAA3149071492115 Aureoumbra lagunensis chloroplast
122NC_012978TAAAA311055511056915 Parachlorella kessleri chloroplast
123NC_013273TAAAA3503175033115 Coix lacryma-jobi chloroplast
124NC_013498TAAAA3842048421815 Ectocarpus siliculosus chloroplast
125NC_013498TAAAA3877978781014 Ectocarpus siliculosus chloroplast
126NC_013498TAAAA3893708938314 Ectocarpus siliculosus chloroplast