Chloroplast Motifs - Imperfect TAAAA Repeats
S.No | Sequence ID | Motif | Iterations | Start | End | Tract Length | Sequence Name |
---|---|---|---|---|---|---|---|
1 | NC_009808 | TAAAA | 7 | 88527 | 88561 | 35 | Ipomoea purpurea chloroplast |
2 | NC_020795 | TAAAA | 5 | 111901 | 111925 | 25 | Chondrus crispus plastid complete genome |
3 | NC_021426 | TAAAA | 5 | 116253 | 116275 | 23 | Trochodendron aralioides chloroplast |
4 | NC_015113 | TAAAA | 4 | 113772 | 113791 | 20 | Anthriscus cerefolium chloroplast |
5 | NC_016430 | TAAAA | 4 | 115505 | 115523 | 19 | Eleutherococcus senticosus chloroplast |
6 | NC_017602 | TAAAA | 4 | 156919 | 156937 | 19 | Elaeis guineensis chloroplast |
7 | NC_018113 | TAAAA | 4 | 75233 | 75253 | 21 | Gossypium robinsonii chloroplast |
8 | NC_020146 | TAAAA | 4 | 44446 | 44464 | 19 | Equisetum hyemale chloroplast |
9 | NC_020438 | TAAAA | 4 | 45601 | 45619 | 19 | Gonium pectorale chloroplast |
10 | NC_020460 | TAAAA | 4 | 60208 | 60226 | 19 | Euglena viridis culture-collection ATCC:PRA110 chloroplast |
11 | NC_020795 | TAAAA | 4 | 60030 | 60048 | 19 | Chondrus crispus plastid complete genome |
12 | NC_001603 | TAAAA | 4 | 140762 | 140781 | 20 | Euglena gracilis chloroplast |
13 | NC_002694 | TAAAA | 4 | 206 | 225 | 20 | Lotus japonicus chloroplast |
14 | NC_006290 | TAAAA | 4 | 114980 | 114998 | 19 | Panax ginseng chloroplast |
15 | NC_008372 | TAAAA | 4 | 48967 | 48986 | 20 | Stigeoclonium helveticum chloroplast |
16 | NC_008535 | TAAAA | 4 | 4160 | 4180 | 21 | Coffea arabica chloroplast |
17 | NC_009766 | TAAAA | 4 | 3232 | 3252 | 21 | Cuscuta reflexa chloroplast |
18 | NC_009808 | TAAAA | 4 | 47265 | 47284 | 20 | Ipomoea purpurea chloroplast |
19 | NC_011600 | TAAAA | 4 | 60069 | 60089 | 21 | Vaucheria litorea chloroplast |
20 | NC_012224 | TAAAA | 4 | 78787 | 78805 | 19 | Jatropha curcas chloroplast |
21 | NC_013843 | TAAAA | 4 | 60401 | 60421 | 21 | Vigna radiata chloroplast |
22 | NC_014675 | TAAAA | 3 | 24152 | 24166 | 15 | Isoetes flaccida chloroplast |
23 | NC_015308 | TAAAA | 3 | 69393 | 69407 | 15 | Hevea brasiliensis chloroplast |
24 | NC_015402 | TAAAA | 3 | 62014 | 62027 | 14 | Ptilidium pulcherrimum chloroplast |
25 | NC_015403 | TAAAA | 3 | 64706 | 64720 | 15 | Fistulifera sp. JPCC DA0580 chloroplast |
26 | NC_015645 | TAAAA | 3 | 33705 | 33719 | 15 | Schizomeris leibleinii chloroplast |
27 | NC_015894 | TAAAA | 3 | 52753 | 52766 | 14 | Wolffiella lingulata chloroplast |
28 | NC_015899 | TAAAA | 3 | 52130 | 52145 | 16 | Wolffia australiana chloroplast |
29 | NC_015899 | TAAAA | 3 | 78706 | 78720 | 15 | Wolffia australiana chloroplast |
30 | NC_015996 | TAAAA | 3 | 35094 | 35108 | 15 | Pyrus pyrifolia chloroplast |
31 | NC_016471 | TAAAA | 3 | 30256 | 30271 | 16 | Neottia nidus-avis plastid |
32 | NC_016731 | TAAAA | 3 | 12523 | 12538 | 16 | Synedra acus chloroplast |
33 | NC_016732 | TAAAA | 3 | 161105 | 161118 | 14 | Dunaliella salina chloroplast |
34 | NC_016732 | TAAAA | 3 | 181064 | 181077 | 14 | Dunaliella salina chloroplast |
35 | NC_016732 | TAAAA | 3 | 234452 | 234466 | 15 | Dunaliella salina chloroplast |
36 | NC_016735 | TAAAA | 3 | 108894 | 108907 | 14 | Fucus vesiculosus chloroplast |
37 | NC_016736 | TAAAA | 3 | 4265 | 4279 | 15 | Ricinus communis chloroplast |
38 | NC_018114 | TAAAA | 3 | 6679 | 6692 | 14 | Erycina pusilla chloroplast |
39 | NC_018114 | TAAAA | 3 | 8990 | 9004 | 15 | Erycina pusilla chloroplast |
40 | NC_018541 | TAAAA | 3 | 58549 | 58563 | 15 | Elodea canadensis chloroplast |
41 | NC_020019 | TAAAA | 3 | 18656 | 18669 | 14 | Camellia sinensis chloroplast |
42 | NC_020146 | TAAAA | 3 | 44126 | 44140 | 15 | Equisetum hyemale chloroplast |
43 | NC_020319 | TAAAA | 3 | 103808 | 103821 | 14 | Cycas revoluta chloroplast |
44 | NC_020362 | TAAAA | 3 | 70788 | 70801 | 14 | Heliconia collinsiana plastid |
45 | NC_020364 | TAAAA | 3 | 115297 | 115310 | 14 | Pseudophoenix vinifera plastid |
46 | NC_020438 | TAAAA | 3 | 49359 | 49372 | 14 | Gonium pectorale chloroplast |
47 | NC_020438 | TAAAA | 3 | 70809 | 70823 | 15 | Gonium pectorale chloroplast |
48 | NC_020438 | TAAAA | 3 | 108105 | 108119 | 15 | Gonium pectorale chloroplast |
49 | NC_020438 | TAAAA | 3 | 126464 | 126478 | 15 | Gonium pectorale chloroplast |
50 | NC_020460 | TAAAA | 3 | 83861 | 83876 | 16 | Euglena viridis culture-collection ATCC:PRA110 chloroplast |
51 | NC_021111 | TAAAA | 3 | 56012 | 56026 | 15 | Cistanche deserticola chloroplast |
52 | NC_021121 | TAAAA | 3 | 6256 | 6271 | 16 | Ardisia polysticta chloroplast |
53 | NC_021189 | TAAAA | 3 | 74691 | 74704 | 14 | Pyropia haitanensis voucher PH-38 chloroplast |
54 | NC_021618 | TAAAA | 3 | 54141 | 54154 | 14 | Grateloupia taiwanensis plastid |
55 | NC_021645 | TAAAA | 3 | 4459 | 4472 | 14 | Glycine cyrtoloba voucher CSIRO:G1267 chloroplast |
56 | NC_000925 | TAAAA | 3 | 71670 | 71683 | 14 | Porphyra purpurea chloroplast |
57 | NC_000925 | TAAAA | 3 | 141774 | 141788 | 15 | Porphyra purpurea chloroplast |
58 | NC_001319 | TAAAA | 3 | 451 | 465 | 15 | Marchantia polymorpha chloroplast |
59 | NC_001319 | TAAAA | 3 | 14146 | 14160 | 15 | Marchantia polymorpha chloroplast |
60 | NC_001319 | TAAAA | 3 | 22334 | 22349 | 16 | Marchantia polymorpha chloroplast |
61 | NC_001319 | TAAAA | 3 | 35185 | 35198 | 14 | Marchantia polymorpha chloroplast |
62 | NC_001319 | TAAAA | 3 | 108566 | 108580 | 15 | Marchantia polymorpha chloroplast |
63 | NC_001603 | TAAAA | 3 | 72911 | 72924 | 14 | Euglena gracilis chloroplast |
64 | NC_001603 | TAAAA | 3 | 74756 | 74771 | 16 | Euglena gracilis chloroplast |
65 | NC_001603 | TAAAA | 3 | 102432 | 102445 | 14 | Euglena gracilis chloroplast |
66 | NC_001603 | TAAAA | 3 | 106993 | 107007 | 15 | Euglena gracilis chloroplast |
67 | NC_001799 | TAAAA | 3 | 28184 | 28198 | 15 | Toxoplasma gondii RH apicoplast |
68 | NC_001865 | TAAAA | 3 | 28872 | 28886 | 15 | Chlorella vulgaris chloroplast |
69 | NC_001865 | TAAAA | 3 | 132508 | 132521 | 14 | Chlorella vulgaris chloroplast |
70 | NC_001879 | TAAAA | 3 | 8074 | 8087 | 14 | Nicotiana tabacum plastid |
71 | NC_002202 | TAAAA | 3 | 45819 | 45834 | 16 | Spinacia oleracea plastid |
72 | NC_002202 | TAAAA | 3 | 118630 | 118644 | 15 | Spinacia oleracea plastid |
73 | NC_002652 | TAAAA | 3 | 16685 | 16699 | 15 | Euglena longa plastid |
74 | NC_002652 | TAAAA | 3 | 35767 | 35781 | 15 | Euglena longa plastid |
75 | NC_004115 | TAAAA | 3 | 39591 | 39604 | 14 | Chaetosphaeridium globosum chloroplast |
76 | NC_004799 | TAAAA | 3 | 144294 | 144308 | 15 | Cyanidioschyzon merolae strain 10D chloroplast |
77 | NC_004823 | TAAAA | 3 | 10558 | 10571 | 14 | Eimeria tenella strain Penn State apicoplast |
78 | NC_004823 | TAAAA | 3 | 15604 | 15617 | 14 | Eimeria tenella strain Penn State apicoplast |
79 | NC_005087 | TAAAA | 3 | 48903 | 48917 | 15 | Physcomitrella patens subsp. patens chloroplast |
80 | NC_007500 | TAAAA | 3 | 8074 | 8087 | 14 | Nicotiana sylvestris chloroplast |
81 | NC_007602 | TAAAA | 3 | 8000 | 8013 | 14 | Nicotiana tomentosiformis chloroplast |
82 | NC_007758 | TAAAA | 3 | 16145 | 16159 | 15 | Theileria parva strain Muguga apicoplast |
83 | NC_007758 | TAAAA | 3 | 29081 | 29095 | 15 | Theileria parva strain Muguga apicoplast |
84 | NC_007758 | TAAAA | 3 | 30318 | 30331 | 14 | Theileria parva strain Muguga apicoplast |
85 | NC_007758 | TAAAA | 3 | 31554 | 31568 | 15 | Theileria parva strain Muguga apicoplast |
86 | NC_007758 | TAAAA | 3 | 33039 | 33053 | 15 | Theileria parva strain Muguga apicoplast |
87 | NC_007942 | TAAAA | 3 | 61893 | 61907 | 15 | Glycine max chloroplast |
88 | NC_008101 | TAAAA | 3 | 122010 | 122023 | 14 | Scenedesmus obliquus chloroplast |
89 | NC_008101 | TAAAA | 3 | 134472 | 134486 | 15 | Scenedesmus obliquus chloroplast |
90 | NC_008101 | TAAAA | 3 | 138354 | 138367 | 14 | Scenedesmus obliquus chloroplast |
91 | NC_008101 | TAAAA | 3 | 149059 | 149072 | 14 | Scenedesmus obliquus chloroplast |
92 | NC_008114 | TAAAA | 3 | 30814 | 30827 | 14 | Pseudendoclonium akinetum chloroplast |
93 | NC_008114 | TAAAA | 3 | 104135 | 104150 | 16 | Pseudendoclonium akinetum chloroplast |
94 | NC_008114 | TAAAA | 3 | 138610 | 138623 | 14 | Pseudendoclonium akinetum chloroplast |
95 | NC_008117 | TAAAA | 3 | 94613 | 94628 | 16 | Zygnema circumcarinatum chloroplast |
96 | NC_008326 | TAAAA | 3 | 116911 | 116924 | 14 | Liriodendron tulipifera chloroplast |
97 | NC_008335 | TAAAA | 3 | 128255 | 128269 | 15 | Platanus occidentalis chloroplast |
98 | NC_008372 | TAAAA | 3 | 117293 | 117306 | 14 | Stigeoclonium helveticum chloroplast |
99 | NC_008457 | TAAAA | 3 | 127148 | 127162 | 15 | Piper cenocladum chloroplast |
100 | NC_008535 | TAAAA | 3 | 118136 | 118150 | 15 | Coffea arabica chloroplast |
101 | NC_008589 | TAAAA | 3 | 17077 | 17091 | 15 | Thalassiosira pseudonana chloroplast |
102 | NC_008589 | TAAAA | 3 | 55740 | 55754 | 15 | Thalassiosira pseudonana chloroplast |
103 | NC_008591 | TAAAA | 3 | 63984 | 63997 | 14 | Agrostis stolonifera chloroplast |
104 | NC_009573 | TAAAA | 3 | 8795 | 8809 | 15 | Rhodomonas salina chloroplast |
105 | NC_009765 | TAAAA | 3 | 44654 | 44667 | 14 | Cuscuta gronovii chloroplast |
106 | NC_009808 | TAAAA | 3 | 88412 | 88426 | 15 | Ipomoea purpurea chloroplast |
107 | NC_010109 | TAAAA | 3 | 34073 | 34087 | 15 | Lemna minor chloroplast |
108 | NC_010433 | TAAAA | 3 | 17392 | 17406 | 15 | Manihot esculenta chloroplast |
109 | NC_010433 | TAAAA | 3 | 18610 | 18623 | 14 | Manihot esculenta chloroplast |
110 | NC_010442 | TAAAA | 3 | 131794 | 131808 | 15 | Trachelium caeruleum chloroplast |
111 | NC_010772 | TAAAA | 3 | 147474 | 147488 | 15 | Heterosigma akashiwo chloroplast |
112 | NC_011032 | TAAAA | 3 | 74806 | 74819 | 14 | Brachypodium distachyon chloroplast |
113 | NC_012052 | TAAAA | 3 | 83290 | 83304 | 15 | Syntrichia ruralis chloroplast |
114 | NC_012052 | TAAAA | 3 | 97932 | 97946 | 15 | Syntrichia ruralis chloroplast |
115 | NC_012097 | TAAAA | 3 | 79989 | 80003 | 15 | Pycnococcus provasolii chloroplast |
116 | NC_012099 | TAAAA | 3 | 44936 | 44950 | 15 | Pyramimonas parkeae chloroplast |
117 | NC_012099 | TAAAA | 3 | 53771 | 53786 | 16 | Pyramimonas parkeae chloroplast |
118 | NC_012099 | TAAAA | 3 | 70440 | 70453 | 14 | Pyramimonas parkeae chloroplast |
119 | NC_012224 | TAAAA | 3 | 19240 | 19253 | 14 | Jatropha curcas chloroplast |
120 | NC_012224 | TAAAA | 3 | 77029 | 77043 | 15 | Jatropha curcas chloroplast |
121 | NC_012903 | TAAAA | 3 | 14907 | 14921 | 15 | Aureoumbra lagunensis chloroplast |
122 | NC_012978 | TAAAA | 3 | 110555 | 110569 | 15 | Parachlorella kessleri chloroplast |
123 | NC_013273 | TAAAA | 3 | 50317 | 50331 | 15 | Coix lacryma-jobi chloroplast |
124 | NC_013498 | TAAAA | 3 | 84204 | 84218 | 15 | Ectocarpus siliculosus chloroplast |
125 | NC_013498 | TAAAA | 3 | 87797 | 87810 | 14 | Ectocarpus siliculosus chloroplast |
126 | NC_013498 | TAAAA | 3 | 89370 | 89383 | 14 | Ectocarpus siliculosus chloroplast |