Chloroplast Motifs - Imperfect CA Repeats
S.No | Sequence ID | Motif | Iterations | Start | End | Tract Length | Sequence Name |
---|---|---|---|---|---|---|---|
1 | NC_014569 | CA | 7 | 13608 | 13620 | 13 | Erodium texanum plastid |
2 | NC_016732 | CA | 7 | 162131 | 162143 | 13 | Dunaliella salina chloroplast |
3 | NC_011031 | CA | 7 | 162373 | 162385 | 13 | Oedogonium cardiacum chloroplast |
4 | NC_014267 | CA | 6 | 99839 | 99849 | 11 | Kryptoperidinium foliaceum chloroplast |
5 | NC_014346 | CA | 6 | 374835 | 374845 | 11 | Floydiella terrestris chloroplast |
6 | NC_014582 | CA | 6 | 23260 | 23271 | 12 | Monsonia speciosa plastid |
7 | NC_014676 | CA | 6 | 150690 | 150700 | 11 | Theobroma cacao chloroplast |
8 | NC_015139 | CA | 6 | 6339 | 6349 | 11 | Brassica rapa subsp. pekinensis chloroplast |
9 | NC_015206 | CA | 6 | 22643 | 22653 | 11 | Fragaria vesca subsp. vesca chloroplast |
10 | NC_016732 | CA | 6 | 106806 | 106816 | 11 | Dunaliella salina chloroplast |
11 | NC_016734 | CA | 6 | 6341 | 6351 | 11 | Brassica napus chloroplast |
12 | NC_018565 | CA | 6 | 6393 | 6403 | 11 | Pachycladon enysii chloroplast |
13 | NC_018766 | CA | 6 | 22646 | 22656 | 11 | Fragaria vesca subsp. bracteata chloroplast |
14 | NC_018767 | CA | 6 | 22659 | 22669 | 11 | Fragaria mandshurica plastid |
15 | NC_019601 | CA | 6 | 22632 | 22642 | 11 | Fragaria chiloensis chloroplast |
16 | NC_019602 | CA | 6 | 22631 | 22641 | 11 | Fragaria virginiana chloroplast |
17 | NC_020363 | CA | 6 | 23912 | 23922 | 11 | Zingiber spectabile plastid |
18 | NC_021437 | CA | 6 | 44985 | 44996 | 12 | Cunninghamia lanceolata chloroplast |
19 | NC_000926 | CA | 6 | 113209 | 113219 | 11 | Guillardia theta chloroplast |
20 | NC_000927 | CA | 6 | 180388 | 180398 | 11 | Nephroselmis olivacea chloroplast |
21 | NC_002202 | CA | 6 | 12743 | 12754 | 12 | Spinacia oleracea plastid |
22 | NC_002202 | CA | 6 | 13373 | 13384 | 12 | Spinacia oleracea plastid |
23 | NC_002693 | CA | 6 | 20264 | 20274 | 11 | Oenothera elata subsp. hookeri plastid plastome I |
24 | NC_003386 | CA | 6 | 99261 | 99272 | 12 | Psilotum nudum chloroplast |
25 | NC_004766 | CA | 6 | 132406 | 132417 | 12 | Adiantum capillus-veneris chloroplast |
26 | NC_006050 | CA | 6 | 89572 | 89582 | 11 | Nymphaea alba chloroplast |
27 | NC_007499 | CA | 6 | 9429 | 9440 | 12 | Phalaenopsis aphrodite subsp. formosana chloroplast |
28 | NC_008454 | CA | 6 | 36520 | 36530 | 11 | Pelargonium x hortorum chloroplast |
29 | NC_008454 | CA | 6 | 102401 | 102411 | 11 | Pelargonium x hortorum chloroplast |
30 | NC_008796 | CA | 6 | 9065 | 9075 | 11 | Ranunculus macranthus chloroplast |
31 | NC_008796 | CA | 6 | 22762 | 22772 | 11 | Ranunculus macranthus chloroplast |
32 | NC_008822 | CA | 6 | 68031 | 68041 | 11 | Chlorokybus atmophyticus chloroplast |
33 | NC_009267 | CA | 6 | 6393 | 6403 | 11 | Olimarabidopsis pumila chloroplast |
34 | NC_009269 | CA | 6 | 6465 | 6475 | 11 | Barbarea verna chloroplast |
35 | NC_009270 | CA | 6 | 6379 | 6389 | 11 | Capsella bursa-pastoris chloroplast |
36 | NC_009271 | CA | 6 | 6322 | 6332 | 11 | Crucihimalaya wallichii chloroplast |
37 | NC_009272 | CA | 6 | 5731 | 5741 | 11 | Draba nemorosa chloroplast |
38 | NC_009273 | CA | 6 | 6288 | 6298 | 11 | Lepidium virginicum chloroplast |
39 | NC_009274 | CA | 6 | 5801 | 5811 | 11 | Lobularia maritima chloroplast |
40 | NC_009275 | CA | 6 | 6506 | 6516 | 11 | Nasturtium officinale chloroplast |
41 | NC_009275 | CA | 6 | 14981 | 14992 | 12 | Nasturtium officinale chloroplast |
42 | NC_009601 | CA | 6 | 22211 | 22221 | 11 | Dioscorea elephantipes chloroplast |
43 | NC_010358 | CA | 6 | 19793 | 19803 | 11 | Oenothera argillicola chloroplast |
44 | NC_010360 | CA | 6 | 20120 | 20130 | 11 | Oenothera glazioviana chloroplast |
45 | NC_010361 | CA | 6 | 20212 | 20222 | 11 | Oenothera biennis chloroplast |
46 | NC_010362 | CA | 6 | 20027 | 20037 | 11 | Oenothera parviflora chloroplast |
47 | NC_010654 | CA | 6 | 2982 | 2993 | 12 | Welwitschia mirabilis chloroplast |
48 | NC_011031 | CA | 6 | 60047 | 60057 | 11 | Oedogonium cardiacum chloroplast |
49 | NC_011031 | CA | 6 | 90563 | 90573 | 11 | Oedogonium cardiacum chloroplast |
50 | NC_011031 | CA | 6 | 109255 | 109265 | 11 | Oedogonium cardiacum chloroplast |
51 | NC_011031 | CA | 6 | 172093 | 172104 | 12 | Oedogonium cardiacum chloroplast |
52 | NC_011031 | CA | 6 | 196061 | 196072 | 12 | Oedogonium cardiacum chloroplast |
53 | NC_012568 | CA | 6 | 21329 | 21339 | 11 | Micromonas pusilla CCMP1545 chloroplast |
54 | NC_012568 | CA | 6 | 25422 | 25432 | 11 | Micromonas pusilla CCMP1545 chloroplast |
55 | NC_012615 | CA | 6 | 32323 | 32334 | 12 | Megaleranthis saniculifolia chloroplast |
56 | NC_012615 | CA | 6 | 149620 | 149630 | 11 | Megaleranthis saniculifolia chloroplast |
57 | NC_013359 | CA | 6 | 12928 | 12938 | 11 | Bryopsis hypnoides chloroplast |
58 | NC_013703 | CA | 6 | 71644 | 71654 | 11 | Cryptomonas paramecium plastid |