Chloroplast Motifs - Imperfect GGAA Repeats
| S.No | Sequence ID | Motif | Iterations | Start | End | Tract Length | Sequence Name |
| 1 | NC_013086 | GGAA | 13 | 134815 | 134867 | 53 | Selaginella moellendorffii plastid |
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| 2 | NC_016064 | GGAA | 5 | 16184 | 16204 | 21 | Pseudotsuga sinensis var. wilsoniana chloroplast |
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| 3 | NC_011087 | GGAA | 3 | 53739 | 53749 | 11 | Paulinella chromatophora chromatophore |
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| 4 | NC_011087 | GGAA | 3 | 402737 | 402748 | 12 | Paulinella chromatophora chromatophore |
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| 5 | NC_014267 | GGAA | 3 | 130375 | 130385 | 11 | Kryptoperidinium foliaceum chloroplast |
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| 6 | NC_014348 | GGAA | 3 | 149870 | 149881 | 12 | Pteridium aquilinum subsp. aquilinum chloroplast |
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| 7 | NC_014592 | GGAA | 3 | 95761 | 95773 | 13 | Cheilanthes lindheimeri chloroplast |
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| 8 | NC_014592 | GGAA | 3 | 126291 | 126302 | 12 | Cheilanthes lindheimeri chloroplast |
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| 9 | NC_014807 | GGAA | 3 | 113673 | 113683 | 11 | Corynocarpus laevigata chloroplast |
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| 10 | NC_014807 | GGAA | 3 | 140718 | 140729 | 12 | Corynocarpus laevigata chloroplast |
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| 11 | NC_015083 | GGAA | 3 | 30881 | 30893 | 13 | Erodium carvifolium chloroplast |
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| 12 | NC_015113 | GGAA | 3 | 109454 | 109464 | 11 | Anthriscus cerefolium chloroplast |
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| 13 | NC_015401 | GGAA | 3 | 111405 | 111415 | 11 | Olea europaea subsp. europaea plastid |
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| 14 | NC_015604 | GGAA | 3 | 111402 | 111412 | 11 | Olea europaea subsp. cuspidata chloroplast |
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| 15 | NC_015605 | GGAA | 3 | 117108 | 117118 | 11 | Nelumbo lutea chloroplast |
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| 16 | NC_015608 | GGAA | 3 | 111486 | 111496 | 11 | Olea woodiana subsp. woodiana chloroplast |
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| 17 | NC_015610 | GGAA | 3 | 117207 | 117217 | 11 | Nelumbo nucifera chloroplast |
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| 18 | NC_015623 | GGAA | 3 | 111424 | 111434 | 11 | Olea europaea subsp. maroccana chloroplast |
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| 19 | NC_015891 | GGAA | 3 | 116719 | 116729 | 11 | Spirodela polyrhiza chloroplast |
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| 20 | NC_015892 | GGAA | 3 | 50894 | 50906 | 13 | Magnolia kwangsiensis chloroplast |
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| 21 | NC_015892 | GGAA | 3 | 113394 | 113404 | 11 | Magnolia kwangsiensis chloroplast |
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| 22 | NC_015894 | GGAA | 3 | 117380 | 117390 | 11 | Wolffiella lingulata chloroplast |
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| 23 | NC_015899 | GGAA | 3 | 117010 | 117020 | 11 | Wolffia australiana chloroplast |
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| 24 | NC_015983 | GGAA | 3 | 111082 | 111092 | 11 | Cucumis melo subsp. melo chloroplast |
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| 25 | NC_015983 | GGAA | 3 | 137556 | 137567 | 12 | Cucumis melo subsp. melo chloroplast |
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| 26 | NC_016068 | GGAA | 3 | 111119 | 111129 | 11 | Nicotiana undulata chloroplast |
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| 27 | NC_016433 | GGAA | 3 | 109449 | 109459 | 11 | Sesamum indicum chloroplast |
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| 28 | NC_016468 | GGAA | 3 | 109479 | 109489 | 11 | Boea hygrometrica chloroplast |
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| 29 | NC_016921 | GGAA | 3 | 29252 | 29263 | 12 | Pentactina rupicola chloroplast |
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| 30 | NC_016986 | GGAA | 3 | 63314 | 63324 | 11 | Ginkgo biloba chloroplast |
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| 31 | NC_017006 | GGAA | 3 | 31942 | 31953 | 12 | Mankyua chejuensis chloroplast |
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| 32 | NC_017602 | GGAA | 3 | 111073 | 111083 | 11 | Elaeis guineensis chloroplast |
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| 33 | NC_018117 | GGAA | 3 | 110956 | 110966 | 11 | Datura stramonium chloroplast |
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| 34 | NC_018357 | GGAA | 3 | 50998 | 51010 | 13 | Magnolia denudata chloroplast |
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| 35 | NC_018357 | GGAA | 3 | 113550 | 113560 | 11 | Magnolia denudata chloroplast |
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| 36 | NC_018552 | GGAA | 3 | 112171 | 112181 | 11 | Capsicum annuum chloroplast |
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| 37 | NC_020092 | GGAA | 3 | 107326 | 107336 | 11 | Chrysanthemum x morifolium chloroplast |
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| 38 | NC_020098 | GGAA | 3 | 109842 | 109852 | 11 | Tectona grandis chloroplast |
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| 39 | NC_020147 | GGAA | 3 | 13432 | 13443 | 12 | Ophioglossum californicum chloroplast |
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| 40 | NC_020147 | GGAA | 3 | 19644 | 19656 | 13 | Ophioglossum californicum chloroplast |
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| 41 | NC_020316 | GGAA | 3 | 51072 | 51084 | 13 | Magnolia officinalis chloroplast |
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| 42 | NC_020316 | GGAA | 3 | 113646 | 113656 | 11 | Magnolia officinalis chloroplast |
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| 43 | NC_020317 | GGAA | 3 | 51080 | 51092 | 13 | Magnolia officinalis subsp. biloba voucher SC001 chloroplast |
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| 44 | NC_020317 | GGAA | 3 | 113595 | 113605 | 11 | Magnolia officinalis subsp. biloba voucher SC001 chloroplast |
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| 45 | NC_020318 | GGAA | 3 | 50668 | 50680 | 13 | Magnolia grandiflora voucher NJ016 chloroplast |
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| 46 | NC_020318 | GGAA | 3 | 113191 | 113201 | 11 | Magnolia grandiflora voucher NJ016 chloroplast |
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| 47 | NC_020319 | GGAA | 3 | 30855 | 30866 | 12 | Cycas revoluta chloroplast |
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| 48 | NC_020320 | GGAA | 3 | 107282 | 107292 | 11 | Chrysanthemum indicum voucher HeN001 chloroplast |
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| 49 | NC_020361 | GGAA | 3 | 34000 | 34011 | 12 | Podocarpus totara chloroplast |
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| 50 | NC_020362 | GGAA | 3 | 115648 | 115658 | 11 | Heliconia collinsiana plastid |
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| 51 | NC_020364 | GGAA | 3 | 111793 | 111803 | 11 | Pseudophoenix vinifera plastid |
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| 52 | NC_020365 | GGAA | 3 | 111404 | 111414 | 11 | Calamus caryotoides plastid |
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| 53 | NC_020366 | GGAA | 3 | 112447 | 112457 | 11 | Bismarckia nobilis plastid |
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| 54 | NC_020367 | GGAA | 3 | 112345 | 112355 | 11 | Dasypogon bromeliifolius plastid |
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| 55 | NC_020431 | GGAA | 3 | 107328 | 107338 | 11 | Salvia miltiorrhiza chloroplast |
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| 56 | NC_020607 | GGAA | 3 | 107304 | 107314 | 11 | Artemisia frigida chloroplast |
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| 57 | NC_021121 | GGAA | 3 | 111304 | 111314 | 11 | Ardisia polysticta chloroplast |
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| 58 | NC_021423 | GGAA | 3 | 110545 | 110555 | 11 | Catharanthus roseus cultivar Pacifica Punch Halo chloroplast |
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| 59 | NC_021425 | GGAA | 3 | 113764 | 113774 | 11 | Tetracentron sinense chloroplast |
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| 60 | NC_021426 | GGAA | 3 | 114907 | 114917 | 11 | Trochodendron aralioides chloroplast |
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| 61 | NC_021449 | GGAA | 3 | 106236 | 106246 | 11 | Utricularia gibba chloroplast |
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| 62 | NC_021636 | GGAA | 3 | 9078 | 9090 | 13 | Glycine tomentella voucher CSIRO:G1403 chloroplast |
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| 63 | NC_021637 | GGAA | 3 | 62883 | 62894 | 12 | Phaeocystis globosa strain Pg-G(A) chloroplast |
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| 64 | NC_021645 | GGAA | 3 | 8955 | 8967 | 13 | Glycine cyrtoloba voucher CSIRO:G1267 chloroplast |
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| 65 | NC_021646 | GGAA | 3 | 8937 | 8949 | 13 | Glycine stenophita voucher CSIRO:G1974 chloroplast |
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| 66 | NC_021647 | GGAA | 3 | 9051 | 9063 | 13 | Glycine canescens voucher CSIRO:G1232 chloroplast |
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| 67 | NC_021648 | GGAA | 3 | 9055 | 9067 | 13 | Glycine dolichocarpa voucher CSIRO:G1134 chloroplast |
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| 68 | NC_021649 | GGAA | 3 | 9077 | 9089 | 13 | Glycine falcata voucher CSIRO:G1718 chloroplast |
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| 69 | NC_021650 | GGAA | 3 | 9056 | 9068 | 13 | Glycine syndetika voucher CSIRO:G1300 chloroplast |
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| 70 | NC_021936 | GGAA | 3 | 107945 | 107955 | 11 | Najas flexilis chloroplast |
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| 71 | NC_021936 | GGAA | 3 | 113806 | 113816 | 11 | Najas flexilis chloroplast |
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| 72 | NC_021936 | GGAA | 3 | 140300 | 140311 | 12 | Najas flexilis chloroplast |
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| 73 | NC_001568 | GGAA | 3 | 41880 | 41890 | 11 | Epifagus virginiana chloroplast |
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| 74 | NC_001675 | GGAA | 3 | 109068 | 109078 | 11 | Cyanophora paradoxa cyanelle |
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| 75 | NC_001879 | GGAA | 3 | 111183 | 111193 | 11 | Nicotiana tabacum plastid |
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| 76 | NC_004543 | GGAA | 3 | 65982 | 65993 | 12 | Anthoceros formosae chloroplast |
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| 77 | NC_004543 | GGAA | 3 | 116139 | 116149 | 11 | Anthoceros formosae chloroplast |
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| 78 | NC_004561 | GGAA | 3 | 111486 | 111496 | 11 | Atropa belladonna chloroplast |
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| 79 | NC_004766 | GGAA | 3 | 60002 | 60012 | 11 | Adiantum capillus-veneris chloroplast |
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| 80 | NC_004766 | GGAA | 3 | 95808 | 95818 | 11 | Adiantum capillus-veneris chloroplast |
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| 81 | NC_004993 | GGAA | 3 | 110126 | 110136 | 11 | Calycanthus floridus var. glaucus chloroplast |
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| 82 | NC_005086 | GGAA | 3 | 116293 | 116303 | 11 | Amborella trichopoda chloroplast |
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| 83 | NC_005353 | GGAA | 3 | 46365 | 46375 | 11 | Chlamydomonas reinhardtii chloroplast |
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| 84 | NC_005353 | GGAA | 3 | 46842 | 46852 | 11 | Chlamydomonas reinhardtii chloroplast |
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| 85 | NC_005353 | GGAA | 3 | 66936 | 66946 | 11 | Chlamydomonas reinhardtii chloroplast |
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| 86 | NC_007144 | GGAA | 3 | 110939 | 110949 | 11 | Cucumis sativus chloroplast |
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| 87 | NC_007144 | GGAA | 3 | 137304 | 137315 | 12 | Cucumis sativus chloroplast |
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| 88 | NC_007407 | GGAA | 3 | 108755 | 108765 | 11 | Acorus calamus plastid |
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| 89 | NC_007500 | GGAA | 3 | 111181 | 111191 | 11 | Nicotiana sylvestris chloroplast |
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| 90 | NC_007602 | GGAA | 3 | 110963 | 110973 | 11 | Nicotiana tomentosiformis chloroplast |
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| 91 | NC_007898 | GGAA | 3 | 110521 | 110531 | 11 | Solanum lycopersicum chloroplast |
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| 92 | NC_007942 | GGAA | 3 | 9065 | 9077 | 13 | Glycine max chloroplast |
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| 93 | NC_007943 | GGAA | 3 | 110405 | 110415 | 11 | Solanum bulbocastanum chloroplast |
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| 94 | NC_008096 | GGAA | 3 | 110358 | 110368 | 11 | Solanum tuberosum chloroplast |
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| 95 | NC_008326 | GGAA | 3 | 113567 | 113577 | 11 | Liriodendron tulipifera chloroplast |
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| 96 | NC_008335 | GGAA | 3 | 117021 | 117031 | 11 | Platanus occidentalis chloroplast |
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| 97 | NC_008336 | GGAA | 3 | 110817 | 110827 | 11 | Nandina domestica chloroplast |
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| 98 | NC_008407 | GGAA | 3 | 116578 | 116588 | 11 | Jasminum nudiflorum chloroplast |
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| 99 | NC_008454 | GGAA | 3 | 12882 | 12893 | 12 | Pelargonium x hortorum chloroplast |
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| 100 | NC_008456 | GGAA | 3 | 114471 | 114481 | 11 | Drimys granadensis chloroplast |
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| 101 | NC_008535 | GGAA | 3 | 110111 | 110121 | 11 | Coffea arabica chloroplast |
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| 102 | NC_008796 | GGAA | 3 | 103324 | 103335 | 12 | Ranunculus macranthus chloroplast |
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| 103 | NC_009259 | GGAA | 3 | 124801 | 124812 | 12 | Phaseolus vulgaris chloroplast |
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| 104 | NC_009598 | GGAA | 3 | 111990 | 112000 | 11 | Chloranthus spicatus chloroplast |
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| 105 | NC_009599 | GGAA | 3 | 113654 | 113664 | 11 | Buxus microphylla chloroplast |
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| 106 | NC_009600 | GGAA | 3 | 112907 | 112917 | 11 | Illicium oligandrum chloroplast |
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| 107 | NC_009601 | GGAA | 3 | 108085 | 108095 | 11 | Dioscorea elephantipes chloroplast |
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| 108 | NC_009808 | GGAA | 3 | 116445 | 116456 | 12 | Ipomoea purpurea chloroplast |
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| 109 | NC_009962 | GGAA | 3 | 33525 | 33535 | 11 | Ceratophyllum demersum chloroplast |
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| 110 | NC_009962 | GGAA | 3 | 111658 | 111668 | 11 | Ceratophyllum demersum chloroplast |
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| 111 | NC_010093 | GGAA | 3 | 108430 | 108440 | 11 | Acorus americanus chloroplast |
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| 112 | NC_010109 | GGAA | 3 | 114725 | 114735 | 11 | Lemna minor chloroplast |
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| 113 | NC_010548 | GGAA | 3 | 92473 | 92484 | 12 | Cryptomeria japonica chloroplast |
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| 114 | NC_010601 | GGAA | 3 | 111303 | 111315 | 13 | Guizotia abyssinica chloroplast |
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| 115 | NC_011152 | GGAA | 3 | 71555 | 71566 | 12 | Picea sitchensis chloroplast |
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| 116 | NC_011163 | GGAA | 3 | 34175 | 34186 | 12 | Cicer arietinum chloroplast |
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| 117 | NC_012615 | GGAA | 3 | 114012 | 114022 | 11 | Megaleranthis saniculifolia chloroplast |
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| 118 | NC_013086 | GGAA | 3 | 88727 | 88737 | 11 | Selaginella moellendorffii plastid |
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| 119 | NC_013703 | GGAA | 3 | 50867 | 50877 | 11 | Cryptomonas paramecium plastid |
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| 120 | NC_013823 | GGAA | 3 | 115139 | 115149 | 11 | Typha latifolia chloroplast |
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| 121 | NC_013991 | GGAA | 3 | 112278 | 112288 | 11 | Phoenix dactylifera chloroplast |
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| 122 | NC_014056 | GGAA | 3 | 47950 | 47962 | 13 | Oncidium Gower Ramsey chloroplast |
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| 123 | NC_014056 | GGAA | 3 | 108017 | 108027 | 11 | Oncidium Gower Ramsey chloroplast |
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| 124 | NC_014063 | GGAA | 3 | 48192 | 48203 | 12 | Lathyrus sativus chloroplast |
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| 125 | NC_013707 | GGAA | 3 | 111391 | 111401 | 11 | Olea europaea chloroplast |
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