Chloroplast Motifs - Imperfect CCT Repeats
| S.No | Sequence ID | Motif | Iterations | Start | End | Tract Length | Sequence Name |
| 1 | NC_013086 | CCT | 7 | 134772 | 134792 | 21 | Selaginella moellendorffii plastid |
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| 2 | NC_014573 | CCT | 4 | 139448 | 139458 | 11 | Geranium palmatum plastid |
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| 3 | NC_014575 | CCT | 4 | 14552 | 14562 | 11 | Cedrus deodara chloroplast |
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| 4 | NC_015605 | CCT | 4 | 153525 | 153536 | 12 | Nelumbo lutea chloroplast |
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| 5 | NC_015610 | CCT | 4 | 153608 | 153619 | 12 | Nelumbo nucifera chloroplast |
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| 6 | NC_016430 | CCT | 4 | 126305 | 126317 | 13 | Eleutherococcus senticosus chloroplast |
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| 7 | NC_016735 | CCT | 4 | 108107 | 108118 | 12 | Fucus vesiculosus chloroplast |
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| 8 | NC_016986 | CCT | 4 | 90231 | 90241 | 11 | Ginkgo biloba chloroplast |
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| 9 | NC_020317 | CCT | 4 | 87420 | 87431 | 12 | Magnolia officinalis subsp. biloba voucher SC001 chloroplast |
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| 10 | NC_020321 | CCT | 4 | 80263 | 80273 | 11 | Taxus mairei voucher NN014 chloroplast |
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| 11 | NC_020321 | CCT | 4 | 97836 | 97848 | 13 | Taxus mairei voucher NN014 chloroplast |
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| 12 | NC_020438 | CCT | 4 | 132407 | 132418 | 12 | Gonium pectorale chloroplast |
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| 13 | NC_021101 | CCT | 4 | 147630 | 147641 | 12 | Francoa sonchifolia plastid |
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| 14 | NC_021425 | CCT | 4 | 70762 | 70773 | 12 | Tetracentron sinense chloroplast |
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| 15 | NC_021438 | CCT | 4 | 98717 | 98727 | 11 | Gnetum montanum chloroplast |
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| 16 | NC_021455 | CCT | 4 | 67363 | 67374 | 12 | Prinsepia utilis plastid |
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| 17 | NC_022136 | CCT | 4 | 31002 | 31013 | 12 | Lygodium japonicum chloroplast |
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| 18 | NC_022136 | CCT | 4 | 91937 | 91948 | 12 | Lygodium japonicum chloroplast |
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| 19 | NC_001840 | CCT | 4 | 47948 | 47959 | 12 | Cyanidium caldarium chloroplast |
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| 20 | NC_001840 | CCT | 4 | 152820 | 152831 | 12 | Cyanidium caldarium chloroplast |
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| 21 | NC_003386 | CCT | 4 | 83833 | 83843 | 11 | Psilotum nudum chloroplast |
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| 22 | NC_004115 | CCT | 4 | 86830 | 86840 | 11 | Chaetosphaeridium globosum chloroplast |
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| 23 | NC_005353 | CCT | 4 | 153467 | 153479 | 13 | Chlamydomonas reinhardtii chloroplast |
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| 24 | NC_006050 | CCT | 4 | 151681 | 151692 | 12 | Nymphaea alba chloroplast |
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| 25 | NC_006861 | CCT | 4 | 39504 | 39516 | 13 | Huperzia lucidula chloroplast |
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| 26 | NC_007932 | CCT | 4 | 94147 | 94157 | 11 | Porphyra yezoensis chloroplast |
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| 27 | NC_008097 | CCT | 4 | 130496 | 130507 | 12 | Chara vulgaris chloroplast |
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| 28 | NC_008407 | CCT | 4 | 46668 | 46679 | 12 | Jasminum nudiflorum chloroplast |
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| 29 | NC_008408 | CCT | 4 | 2619 | 2630 | 12 | Bigelowiella natans plastid |
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| 30 | NC_008454 | CCT | 4 | 104864 | 104875 | 12 | Pelargonium x hortorum chloroplast |
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| 31 | NC_008456 | CCT | 4 | 132721 | 132732 | 12 | Drimys granadensis chloroplast |
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| 32 | NC_008788 | CCT | 4 | 152383 | 152394 | 12 | Nuphar advena chloroplast |
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| 33 | NC_008796 | CCT | 4 | 129697 | 129708 | 12 | Ranunculus macranthus chloroplast |
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| 34 | NC_008829 | CCT | 4 | 89240 | 89250 | 11 | Angiopteris evecta chloroplast |
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| 35 | NC_009618 | CCT | 4 | 89301 | 89311 | 11 | Cycas taitungensis chloroplast |
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| 36 | NC_010359 | CCT | 4 | 97104 | 97115 | 12 | Aneura mirabilis chloroplast |
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| 37 | NC_010548 | CCT | 4 | 17152 | 17162 | 11 | Cryptomeria japonica chloroplast |
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| 38 | NC_010654 | CCT | 4 | 94625 | 94635 | 11 | Welwitschia mirabilis chloroplast |
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| 39 | NC_011031 | CCT | 4 | 191361 | 191372 | 12 | Oedogonium cardiacum chloroplast |
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| 40 | NC_011942 | CCT | 4 | 41115 | 41125 | 11 | Gnetum parvifolium chloroplast |
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| 41 | NC_011954 | CCT | 4 | 60076 | 60086 | 11 | Ephedra equisetina chloroplast |
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| 42 | NC_012099 | CCT | 4 | 10386 | 10398 | 13 | Pyramimonas parkeae chloroplast |
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| 43 | NC_012818 | CCT | 4 | 119087 | 119098 | 12 | Alsophila spinulosa chloroplast |
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| 44 | NC_014062 | CCT | 4 | 120612 | 120622 | 11 | Anomochloa marantoidea chloroplast |
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| 45 | NC_014062 | CCT | 4 | 129206 | 129217 | 12 | Anomochloa marantoidea chloroplast |
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