Chloroplast Motifs - Imperfect TTGC Repeats
S.No | Sequence ID | Motif | Iterations | Start | End | Tract Length | Sequence Name |
---|---|---|---|---|---|---|---|
1 | NC_020795 | TTGC | 4 | 53492 | 53506 | 15 | Chondrus crispus plastid complete genome |
2 | NC_011087 | TTGC | 3 | 492520 | 492530 | 11 | Paulinella chromatophora chromatophore |
3 | NC_011087 | TTGC | 3 | 930247 | 930259 | 13 | Paulinella chromatophora chromatophore |
4 | NC_011087 | TTGC | 3 | 966362 | 966373 | 12 | Paulinella chromatophora chromatophore |
5 | NC_014348 | TTGC | 3 | 12133 | 12143 | 11 | Pteridium aquilinum subsp. aquilinum chloroplast |
6 | NC_014570 | TTGC | 3 | 37716 | 37726 | 11 | Eucalyptus grandis chloroplast |
7 | NC_014582 | TTGC | 3 | 19162 | 19172 | 11 | Monsonia speciosa plastid |
8 | NC_014592 | TTGC | 3 | 25045 | 25055 | 11 | Cheilanthes lindheimeri chloroplast |
9 | NC_014674 | TTGC | 3 | 39169 | 39179 | 11 | Castanea mollissima chloroplast |
10 | NC_014676 | TTGC | 3 | 36570 | 36580 | 11 | Theobroma cacao chloroplast |
11 | NC_014697 | TTGC | 3 | 36050 | 36060 | 11 | Prunus persica chloroplast |
12 | NC_015084 | TTGC | 3 | 78296 | 78306 | 11 | Coccomyxa sp. C-169 plastid |
13 | NC_015204 | TTGC | 3 | 36370 | 36380 | 11 | Gossypium thurberi chloroplast |
14 | NC_015206 | TTGC | 3 | 35488 | 35498 | 11 | Fragaria vesca subsp. vesca chloroplast |
15 | NC_015308 | TTGC | 3 | 38006 | 38016 | 11 | Hevea brasiliensis chloroplast |
16 | NC_015996 | TTGC | 3 | 37474 | 37484 | 11 | Pyrus pyrifolia chloroplast |
17 | NC_016471 | TTGC | 3 | 87858 | 87868 | 11 | Neottia nidus-avis plastid |
18 | NC_016668 | TTGC | 3 | 36268 | 36278 | 11 | Gossypium raimondii chloroplast |
19 | NC_016670 | TTGC | 3 | 36430 | 36440 | 11 | Gossypium darwinii chloroplast |
20 | NC_016690 | TTGC | 3 | 36393 | 36403 | 11 | Gossypium tomentosum chloroplast |
21 | NC_016692 | TTGC | 3 | 36358 | 36368 | 11 | Gossypium herbaceum subsp. africanum chloroplast |
22 | NC_016711 | TTGC | 3 | 36385 | 36395 | 11 | Gossypium mustelinum chloroplast |
23 | NC_016712 | TTGC | 3 | 36332 | 36342 | 11 | Gossypium arboreum chloroplast |
24 | NC_016727 | TTGC | 3 | 32793 | 32803 | 11 | Silene vulgaris chloroplast |
25 | NC_016729 | TTGC | 3 | 31247 | 31257 | 11 | Silene conica chloroplast |
26 | NC_016730 | TTGC | 3 | 32856 | 32866 | 11 | Silene latifolia chloroplast |
27 | NC_016736 | TTGC | 3 | 38773 | 38783 | 11 | Ricinus communis chloroplast |
28 | NC_016921 | TTGC | 3 | 36130 | 36140 | 11 | Pentactina rupicola chloroplast |
29 | NC_017609 | TTGC | 3 | 145870 | 145880 | 11 | Phalaenopsis equestris chloroplast |
30 | NC_017894 | TTGC | 3 | 36284 | 36294 | 11 | Gossypium gossypioides chloroplast |
31 | NC_018109 | TTGC | 3 | 36033 | 36043 | 11 | Gossypium incanum chloroplast |
32 | NC_018110 | TTGC | 3 | 36148 | 36158 | 11 | Gossypium somalense chloroplast |
33 | NC_018111 | TTGC | 3 | 35957 | 35967 | 11 | Gossypium capitis-viridis chloroplast |
34 | NC_018112 | TTGC | 3 | 36148 | 36158 | 11 | Gossypium areysianum chloroplast |
35 | NC_018113 | TTGC | 3 | 36151 | 36161 | 11 | Gossypium robinsonii chloroplast |
36 | NC_018114 | TTGC | 3 | 140112 | 140122 | 11 | Erycina pusilla chloroplast |
37 | NC_018569 | TTGC | 3 | 92323 | 92334 | 12 | Trebouxiophyceae sp. MX-AZ01 chloroplast |
38 | NC_018766 | TTGC | 3 | 35503 | 35513 | 11 | Fragaria vesca subsp. bracteata chloroplast |
39 | NC_018767 | TTGC | 3 | 35488 | 35498 | 11 | Fragaria mandshurica plastid |
40 | NC_019601 | TTGC | 3 | 35442 | 35452 | 11 | Fragaria chiloensis chloroplast |
41 | NC_019602 | TTGC | 3 | 35441 | 35451 | 11 | Fragaria virginiana chloroplast |
42 | NC_019649 | TTGC | 3 | 30421 | 30432 | 12 | Festuca ovina plastid |
43 | NC_020152 | TTGC | 3 | 39138 | 39148 | 11 | Quercus rubra plastid |
44 | NC_020795 | TTGC | 3 | 52257 | 52267 | 11 | Chondrus crispus plastid complete genome |
45 | NC_020795 | TTGC | 3 | 110983 | 110993 | 11 | Chondrus crispus plastid complete genome |
46 | NC_021101 | TTGC | 3 | 35231 | 35241 | 11 | Francoa sonchifolia plastid |
47 | NC_021109 | TTGC | 3 | 32523 | 32534 | 12 | Pleodorina starrii plastid |
48 | NC_021429 | TTGC | 3 | 153867 | 153877 | 11 | Cymbidium aloifolium voucher KUN:YJB100604 chloroplast |
49 | NC_021430 | TTGC | 3 | 152511 | 152521 | 11 | Cymbidium sinense voucher KUN:YJB100605 chloroplast |
50 | NC_021431 | TTGC | 3 | 152590 | 152600 | 11 | Cymbidium tortisepalum voucher KUN:HJL091027 chloroplast |
51 | NC_021432 | TTGC | 3 | 153275 | 153285 | 11 | Cymbidium tracyanum voucher KUN:YJB100606 chloroplast |
52 | NC_021433 | TTGC | 3 | 152261 | 152271 | 11 | Cymbidium mannii voucher KUN:YJB100602 chloroplast |
53 | NC_021618 | TTGC | 3 | 155522 | 155532 | 11 | Grateloupia taiwanensis plastid |
54 | NC_021618 | TTGC | 3 | 189810 | 189821 | 12 | Grateloupia taiwanensis plastid |
55 | NC_001675 | TTGC | 3 | 100322 | 100332 | 11 | Cyanophora paradoxa cyanelle |
56 | NC_001713 | TTGC | 3 | 12396 | 12406 | 11 | Odontella sinensis chloroplast |
57 | NC_004543 | TTGC | 3 | 51894 | 51904 | 11 | Anthoceros formosae chloroplast |
58 | NC_004799 | TTGC | 3 | 58124 | 58134 | 11 | Cyanidioschyzon merolae strain 10D chloroplast |
59 | NC_006137 | TTGC | 3 | 128697 | 128707 | 11 | Gracilaria tenuistipitata var. liui chloroplast |
60 | NC_006861 | TTGC | 3 | 80820 | 80830 | 11 | Huperzia lucidula chloroplast |
61 | NC_007499 | TTGC | 3 | 145856 | 145866 | 11 | Phalaenopsis aphrodite subsp. formosana chloroplast |
62 | NC_007944 | TTGC | 3 | 36459 | 36469 | 11 | Gossypium hirsutum chloroplast |
63 | NC_007957 | TTGC | 3 | 37966 | 37976 | 11 | Vitis vinifera chloroplast |
64 | NC_008097 | TTGC | 3 | 60396 | 60406 | 11 | Chara vulgaris chloroplast |
65 | NC_008115 | TTGC | 3 | 37847 | 37857 | 11 | Eucalyptus globulus subsp. globulus chloroplast |
66 | NC_008235 | TTGC | 3 | 34306 | 34316 | 11 | Populus alba chloroplast |
67 | NC_008334 | TTGC | 3 | 37655 | 37665 | 11 | Citrus sinensis chloroplast |
68 | NC_008454 | TTGC | 3 | 47459 | 47469 | 11 | Pelargonium x hortorum chloroplast |
69 | NC_008641 | TTGC | 3 | 36395 | 36405 | 11 | Gossypium barbadense chloroplast |
70 | NC_008829 | TTGC | 3 | 20774 | 20784 | 11 | Angiopteris evecta chloroplast |
71 | NC_009143 | TTGC | 3 | 34637 | 34647 | 11 | Populus trichocarpa chloroplast |
72 | NC_009681 | TTGC | 3 | 89260 | 89271 | 12 | Leptosira terrestris chloroplast |
73 | NC_010323 | TTGC | 3 | 36815 | 36825 | 11 | Carica papaya chloroplast |
74 | NC_010433 | TTGC | 3 | 37179 | 37189 | 11 | Manihot esculenta chloroplast |
75 | NC_010548 | TTGC | 3 | 105599 | 105610 | 12 | Cryptomeria japonica chloroplast |
76 | NC_010776 | TTGC | 3 | 34742 | 34752 | 11 | Fagopyrum esculentum subsp. ancestrale chloroplast |
77 | NC_012224 | TTGC | 3 | 39065 | 39075 | 11 | Jatropha curcas chloroplast |
78 | NC_014056 | TTGC | 3 | 143439 | 143449 | 11 | Oncidium Gower Ramsey chloroplast |