Chloroplast Motifs - Imperfect TTTCG Repeats
S.No | Sequence ID | Motif | Iterations | Start | End | Tract Length | Sequence Name |
---|---|---|---|---|---|---|---|
1 | NC_007578 | TTTCG | 3 | 96633 | 96646 | 14 | Lactuca sativa chloroplast |
2 | NC_008335 | TTTCG | 3 | 104767 | 104780 | 14 | Platanus occidentalis chloroplast |
3 | NC_008334 | TTTCG | 3 | 101489 | 101502 | 14 | Citrus sinensis chloroplast |
4 | NC_008326 | TTTCG | 3 | 101255 | 101268 | 14 | Liriodendron tulipifera chloroplast |
5 | NC_008325 | TTTCG | 3 | 96400 | 96413 | 14 | Daucus carota chloroplast |
6 | NC_008235 | TTTCG | 3 | 98268 | 98281 | 14 | Populus alba chloroplast |
7 | NC_008096 | TTTCG | 3 | 98476 | 98489 | 14 | Solanum tuberosum chloroplast |
8 | NC_007977 | TTTCG | 3 | 95665 | 95678 | 14 | Helianthus annuus chloroplast |
9 | NC_007957 | TTTCG | 3 | 102341 | 102354 | 14 | Vitis vinifera chloroplast |
10 | NC_007943 | TTTCG | 3 | 98523 | 98536 | 14 | Solanum bulbocastanum chloroplast |
11 | NC_007942 | TTTCG | 3 | 96120 | 96133 | 14 | Glycine max chloroplast |
12 | NC_007898 | TTTCG | 3 | 98627 | 98640 | 14 | Solanum lycopersicum chloroplast |
13 | NC_007602 | TTTCG | 3 | 99220 | 99233 | 14 | Nicotiana tomentosiformis chloroplast |
14 | NC_008336 | TTTCG | 3 | 98644 | 98657 | 14 | Nandina domestica chloroplast |
15 | NC_007500 | TTTCG | 3 | 99445 | 99458 | 14 | Nicotiana sylvestris chloroplast |
16 | NC_007407 | TTTCG | 3 | 96276 | 96289 | 14 | Acorus calamus plastid |
17 | NC_006290 | TTTCG | 3 | 98394 | 98407 | 14 | Panax ginseng chloroplast |
18 | NC_004561 | TTTCG | 3 | 99719 | 99732 | 14 | Atropa belladonna chloroplast |
19 | NC_002694 | TTTCG | 3 | 94999 | 95012 | 14 | Lotus japonicus chloroplast |
20 | NC_001879 | TTTCG | 3 | 99447 | 99460 | 14 | Nicotiana tabacum plastid |
21 | NC_000932 | TTTCG | 3 | 97358 | 97371 | 14 | Arabidopsis thaliana chloroplast |
22 | NC_021650 | TTTCG | 3 | 96767 | 96780 | 14 | Glycine syndetika voucher CSIRO:G1300 chloroplast |
23 | NC_021649 | TTTCG | 3 | 96979 | 96992 | 14 | Glycine falcata voucher CSIRO:G1718 chloroplast |
24 | NC_021648 | TTTCG | 3 | 96756 | 96769 | 14 | Glycine dolichocarpa voucher CSIRO:G1134 chloroplast |
25 | NC_021647 | TTTCG | 3 | 96502 | 96515 | 14 | Glycine canescens voucher CSIRO:G1232 chloroplast |
26 | NC_009273 | TTTCG | 3 | 97188 | 97201 | 14 | Lepidium virginicum chloroplast |
27 | NC_013707 | TTTCG | 3 | 99327 | 99340 | 14 | Olea europaea chloroplast |
28 | NC_013843 | TTTCG | 3 | 94778 | 94791 | 14 | Vigna radiata chloroplast |
29 | NC_013553 | TTTCG | 3 | 97187 | 97200 | 14 | Parthenium argentatum chloroplast |
30 | NC_012615 | TTTCG | 3 | 101601 | 101614 | 14 | Megaleranthis saniculifolia chloroplast |
31 | NC_010601 | TTTCG | 3 | 96098 | 96111 | 14 | Guizotia abyssinica chloroplast |
32 | NC_010093 | TTTCG | 3 | 95951 | 95964 | 14 | Acorus americanus chloroplast |
33 | NC_009962 | TTTCG | 3 | 99193 | 99206 | 14 | Ceratophyllum demersum chloroplast |
34 | NC_009599 | TTTCG | 3 | 101327 | 101340 | 14 | Buxus microphylla chloroplast |
35 | NC_009598 | TTTCG | 3 | 99725 | 99738 | 14 | Chloranthus spicatus chloroplast |
36 | NC_009275 | TTTCG | 3 | 97451 | 97464 | 14 | Nasturtium officinale chloroplast |
37 | NC_009274 | TTTCG | 3 | 95590 | 95603 | 14 | Lobularia maritima chloroplast |
38 | NC_021646 | TTTCG | 3 | 96880 | 96893 | 14 | Glycine stenophita voucher CSIRO:G1974 chloroplast |
39 | NC_009271 | TTTCG | 3 | 97306 | 97319 | 14 | Crucihimalaya wallichii chloroplast |
40 | NC_009270 | TTTCG | 3 | 96902 | 96915 | 14 | Capsella bursa-pastoris chloroplast |
41 | NC_009269 | TTTCG | 3 | 96602 | 96615 | 14 | Barbarea verna chloroplast |
42 | NC_009267 | TTTCG | 3 | 97058 | 97071 | 14 | Olimarabidopsis pumila chloroplast |
43 | NC_009266 | TTTCG | 3 | 96655 | 96668 | 14 | Aethionema grandiflorum chloroplast |
44 | NC_009265 | TTTCG | 3 | 96610 | 96623 | 14 | Aethionema cordifolium chloroplast |
45 | NC_009143 | TTTCG | 3 | 98788 | 98801 | 14 | Populus trichocarpa chloroplast |
46 | NC_008457 | TTTCG | 3 | 100912 | 100925 | 14 | Piper cenocladum chloroplast |
47 | NC_008456 | TTTCG | 3 | 102225 | 102238 | 14 | Drimys granadensis chloroplast |
48 | NC_008407 | TTTCG | 3 | 104862 | 104875 | 14 | Jasminum nudiflorum chloroplast |
49 | NC_015608 | TTTCG | 3 | 99432 | 99445 | 14 | Olea woodiana subsp. woodiana chloroplast |
50 | NC_016734 | TTTCG | 3 | 96193 | 96206 | 14 | Brassica napus chloroplast |
51 | NC_016433 | TTTCG | 3 | 97399 | 97412 | 14 | Sesamum indicum chloroplast |
52 | NC_016430 | TTTCG | 3 | 99085 | 99098 | 14 | Eleutherococcus senticosus chloroplast |
53 | NC_016068 | TTTCG | 3 | 99377 | 99390 | 14 | Nicotiana undulata chloroplast |
54 | NC_015996 | TTTCG | 3 | 101036 | 101049 | 14 | Pyrus pyrifolia chloroplast |
55 | NC_015892 | TTTCG | 3 | 101141 | 101154 | 14 | Magnolia kwangsiensis chloroplast |
56 | NC_015623 | TTTCG | 3 | 99360 | 99373 | 14 | Olea europaea subsp. maroccana chloroplast |
57 | NC_015621 | TTTCG | 3 | 97331 | 97344 | 14 | Ageratina adenophora chloroplast |
58 | NC_015610 | TTTCG | 3 | 105072 | 105085 | 14 | Nelumbo nucifera chloroplast |
59 | NC_016921 | TTTCG | 3 | 98226 | 98239 | 14 | Pentactina rupicola chloroplast |
60 | NC_015605 | TTTCG | 3 | 104967 | 104980 | 14 | Nelumbo lutea chloroplast |
61 | NC_015604 | TTTCG | 3 | 99349 | 99362 | 14 | Olea europaea subsp. cuspidata chloroplast |
62 | NC_015543 | TTTCG | 3 | 95223 | 95236 | 14 | Jacobaea vulgaris chloroplast |
63 | NC_015401 | TTTCG | 3 | 99341 | 99354 | 14 | Olea europaea subsp. europaea plastid |
64 | NC_015139 | TTTCG | 3 | 96445 | 96458 | 14 | Brassica rapa subsp. pekinensis chloroplast |
65 | NC_015113 | TTTCG | 3 | 97121 | 97134 | 14 | Anthriscus cerefolium chloroplast |
66 | NC_014807 | TTTCG | 3 | 101655 | 101668 | 14 | Corynocarpus laevigata chloroplast |
67 | NC_014697 | TTTCG | 3 | 99165 | 99178 | 14 | Prunus persica chloroplast |
68 | NC_014676 | TTTCG | 3 | 102537 | 102550 | 14 | Theobroma cacao chloroplast |
69 | NC_014674 | TTTCG | 3 | 103163 | 103176 | 14 | Castanea mollissima chloroplast |
70 | NC_020320 | TTTCG | 3 | 95284 | 95297 | 14 | Chrysanthemum indicum voucher HeN001 chloroplast |
71 | NC_021645 | TTTCG | 3 | 96570 | 96583 | 14 | Glycine cyrtoloba voucher CSIRO:G1267 chloroplast |
72 | NC_021636 | TTTCG | 3 | 96714 | 96727 | 14 | Glycine tomentella voucher CSIRO:G1403 chloroplast |
73 | NC_021455 | TTTCG | 3 | 98363 | 98376 | 14 | Prinsepia utilis plastid |
74 | NC_021449 | TTTCG | 3 | 94211 | 94224 | 14 | Utricularia gibba chloroplast |
75 | NC_021102 | TTTCG | 3 | 96731 | 96744 | 14 | Pachycladon cheesemanii chloroplast |
76 | NC_021101 | TTTCG | 3 | 99177 | 99190 | 14 | Francoa sonchifolia plastid |
77 | NC_021091 | TTTCG | 3 | 95158 | 95171 | 14 | Vigna angularis chloroplast DNA |
78 | NC_020607 | TTTCG | 3 | 95282 | 95295 | 14 | Artemisia frigida chloroplast |
79 | NC_020431 | TTTCG | 3 | 95387 | 95400 | 14 | Salvia miltiorrhiza chloroplast |
80 | NC_011087 | TTTCG | 3 | 85416 | 85430 | 15 | Paulinella chromatophora chromatophore |
81 | NC_020318 | TTTCG | 3 | 100893 | 100906 | 14 | Magnolia grandiflora voucher NJ016 chloroplast |
82 | NC_020317 | TTTCG | 3 | 101333 | 101346 | 14 | Magnolia officinalis subsp. biloba voucher SC001 chloroplast |
83 | NC_020316 | TTTCG | 3 | 101357 | 101370 | 14 | Magnolia officinalis chloroplast |
84 | NC_020152 | TTTCG | 3 | 103292 | 103305 | 14 | Quercus rubra plastid |
85 | NC_020098 | TTTCG | 3 | 97787 | 97800 | 14 | Tectona grandis chloroplast |
86 | NC_020092 | TTTCG | 3 | 95335 | 95348 | 14 | Chrysanthemum x morifolium chloroplast |
87 | NC_020019 | TTTCG | 3 | 99519 | 99532 | 14 | Camellia sinensis chloroplast |
88 | NC_018565 | TTTCG | 3 | 97096 | 97109 | 14 | Pachycladon enysii chloroplast |
89 | NC_018357 | TTTCG | 3 | 101248 | 101261 | 14 | Magnolia denudata chloroplast |
90 | NC_018117 | TTTCG | 3 | 99082 | 99095 | 14 | Datura stramonium chloroplast |
91 | NC_018051 | TTTCG | 3 | 94754 | 94767 | 14 | Vigna unguiculata chloroplast |