Chloroplast Motifs - Imperfect TCCA Repeats
S.No | Sequence ID | Motif | Iterations | Start | End | Tract Length | Sequence Name |
---|---|---|---|---|---|---|---|
1 | NC_014592 | TCCA | 4 | 138490 | 138505 | 16 | Cheilanthes lindheimeri chloroplast |
2 | NC_016065 | TCCA | 4 | 2691 | 2706 | 16 | Taiwania cryptomerioides chloroplast DNA |
3 | NC_021441 | TCCA | 4 | 2691 | 2706 | 16 | Taiwania flousiana chloroplast |
4 | NC_011087 | TCCA | 3 | 799510 | 799522 | 13 | Paulinella chromatophora chromatophore |
5 | NC_014348 | TCCA | 3 | 134978 | 134989 | 12 | Pteridium aquilinum subsp. aquilinum chloroplast |
6 | NC_014589 | TCCA | 3 | 82333 | 82344 | 12 | Cathaya argyrophylla chloroplast |
7 | NC_014675 | TCCA | 3 | 35821 | 35832 | 12 | Isoetes flaccida chloroplast |
8 | NC_015359 | TCCA | 3 | 31427 | 31438 | 12 | Chlorella variabilis plastid |
9 | NC_016058 | TCCA | 3 | 75105 | 75116 | 12 | Larix decidua chloroplast |
10 | NC_016064 | TCCA | 3 | 106346 | 106357 | 12 | Pseudotsuga sinensis var. wilsoniana chloroplast |
11 | NC_016727 | TCCA | 3 | 125954 | 125965 | 12 | Silene vulgaris chloroplast |
12 | NC_016728 | TCCA | 3 | 127041 | 127052 | 12 | Silene noctiflora chloroplast |
13 | NC_016730 | TCCA | 3 | 126115 | 126126 | 12 | Silene latifolia chloroplast |
14 | NC_016986 | TCCA | 3 | 71656 | 71667 | 12 | Ginkgo biloba chloroplast |
15 | NC_017006 | TCCA | 3 | 22365 | 22375 | 11 | Mankyua chejuensis chloroplast |
16 | NC_018569 | TCCA | 3 | 50407 | 50418 | 12 | Trebouxiophyceae sp. MX-AZ01 chloroplast |
17 | NC_020014 | TCCA | 3 | 4106 | 4118 | 13 | Nannochloropsis gaditana chloroplast |
18 | NC_020147 | TCCA | 3 | 64948 | 64959 | 12 | Ophioglossum californicum chloroplast |
19 | NC_020321 | TCCA | 3 | 3205 | 3216 | 12 | Taxus mairei voucher NN014 chloroplast |
20 | NC_020361 | TCCA | 3 | 63014 | 63025 | 12 | Podocarpus totara chloroplast |
21 | NC_021437 | TCCA | 3 | 2922 | 2933 | 12 | Cunninghamia lanceolata chloroplast |
22 | NC_021439 | TCCA | 3 | 104929 | 104940 | 12 | Pinus massoniana chloroplast |
23 | NC_001631 | TCCA | 3 | 104932 | 104943 | 12 | Pinus thunbergii chloroplast |
24 | NC_002186 | TCCA | 3 | 95443 | 95453 | 11 | Mesostigma viride chloroplast |
25 | NC_002202 | TCCA | 3 | 63784 | 63796 | 13 | Spinacia oleracea plastid |
26 | NC_004677 | TCCA | 3 | 101651 | 101662 | 12 | Pinus koraiensis chloroplast |
27 | NC_004766 | TCCA | 3 | 133135 | 133146 | 12 | Adiantum capillus-veneris chloroplast |
28 | NC_008788 | TCCA | 3 | 1407 | 1419 | 13 | Nuphar advena chloroplast |
29 | NC_009601 | TCCA | 3 | 1194 | 1205 | 12 | Dioscorea elephantipes chloroplast |
30 | NC_009766 | TCCA | 3 | 56940 | 56950 | 11 | Cuscuta reflexa chloroplast |
31 | NC_011152 | TCCA | 3 | 106158 | 106169 | 12 | Picea sitchensis chloroplast |
32 | NC_011153 | TCCA | 3 | 105691 | 105702 | 12 | Pinus contorta chloroplast |
33 | NC_011154 | TCCA | 3 | 102163 | 102174 | 12 | Pinus gerardiana chloroplast |
34 | NC_011156 | TCCA | 3 | 101761 | 101772 | 12 | Pinus lambertiana chloroplast |
35 | NC_011158 | TCCA | 3 | 101671 | 101682 | 12 | Pinus monophylla chloroplast |
36 | NC_012615 | TCCA | 3 | 3677 | 3689 | 13 | Megaleranthis saniculifolia chloroplast |
37 | NC_012615 | TCCA | 3 | 82464 | 82475 | 12 | Megaleranthis saniculifolia chloroplast |
38 | NC_013359 | TCCA | 3 | 55355 | 55366 | 12 | Bryopsis hypnoides chloroplast |