ChloroMitoSSRDB 2.0 Webserver cum Database of Cholorplast and Mitochondrial Microsatellites

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Chloroplast Motifs - Imperfect GATC Repeats

S.NoSequence IDMotifIterationsStartEndTract LengthSequence Name
1NC_014676GATC3391593916911Theobroma cacao chloroplast
2NC_014697GATC3634186342912Prunus persica chloroplast
3NC_015113GATC3377293773911Anthriscus cerefolium chloroplast
4NC_015204GATC3390273903711Gossypium thurberi chloroplast
5NC_015621GATC3363603637011Ageratina adenophora chloroplast
6NC_015990GATC3867838679412Panicum virgatum chloroplast
7NC_015996GATC3650056501612Pyrus pyrifolia chloroplast
8NC_016063GATC38221823111Cephalotaxus wilsoniana chloroplast DNA
9NC_016068GATC314932314933311Nicotiana undulata chloroplast
10NC_016069GATC312313412314613Picea morrisonicola chloroplast
11NC_016430GATC3391573916711Eleutherococcus senticosus chloroplast
12NC_016668GATC3388933890311Gossypium raimondii chloroplast
13NC_016670GATC3391373914711Gossypium darwinii chloroplast
14NC_016690GATC3391193912911Gossypium tomentosum chloroplast
15NC_016692GATC3390163902611Gossypium herbaceum subsp. africanum chloroplast
16NC_016711GATC3390693907911Gossypium mustelinum chloroplast
17NC_016712GATC3389893899911Gossypium arboreum chloroplast
18NC_016921GATC3632626327312Pentactina rupicola chloroplast
19NC_016986GATC311608411609512Ginkgo biloba chloroplast
20NC_017006GATC311601311602412Mankyua chejuensis chloroplast
21NC_017894GATC3389123892211Gossypium gossypioides chloroplast
22NC_018109GATC3385513856111Gossypium incanum chloroplast
23NC_018110GATC3386693867911Gossypium somalense chloroplast
24NC_018111GATC3385143852411Gossypium capitis-viridis chloroplast
25NC_018112GATC3386933870311Gossypium areysianum chloroplast
26NC_018113GATC3387463875611Gossypium robinsonii chloroplast
27NC_018552GATC314996314997311Capsicum annuum chloroplast
28NC_019616GATC3208952090713Vaccinium macrocarpon plastid
29NC_019616GATC3673206733011Vaccinium macrocarpon plastid
30NC_020098GATC3524385245013Tectona grandis chloroplast
31NC_020147GATC3143961440712Ophioglossum californicum chloroplast
32NC_020319GATC313829513830612Cycas revoluta chloroplast
33NC_020321GATC3923869239712Taxus mairei voucher NN014 chloroplast
34NC_020366GATC3860708608112Bismarckia nobilis plastid
35NC_021110GATC38123813311Cephalotaxus oliveri chloroplast
36NC_021372GATC3884608847112Pharus latifolius chloroplast
37NC_021439GATC3827638277412Pinus massoniana chloroplast
38NC_021440GATC3835108352112Pinus taeda chloroplast
39NC_021455GATC3630116302212Prinsepia utilis plastid
40NC_022136GATC3736607367011Lygodium japonicum chloroplast
41NC_022136GATC3899388995013Lygodium japonicum chloroplast
42NC_022136GATC315275915277113Lygodium japonicum chloroplast
43NC_001631GATC3827568276712 Pinus thunbergii chloroplast
44NC_001666GATC3874478745812 Zea mays chloroplast
45NC_001879GATC314938014939011 Nicotiana tabacum plastid
46NC_002693GATC3653846539613 Oenothera elata subsp. hookeri plastid plastome I
47NC_004561GATC315004115005111 Atropa belladonna chloroplast
48NC_004677GATC3812888129912 Pinus koraiensis chloroplast
49NC_005878GATC38589860012 Saccharum hybrid cultivar SP-80-3280 chloroplast
50NC_006084GATC3881468815712 Saccharum hybrid cultivar NCo 310 chloroplast
51NC_006290GATC3388543886411 Panax ginseng chloroplast
52NC_007500GATC314937814938811 Nicotiana sylvestris chloroplast
53NC_007578GATC3364933650311 Lactuca sativa chloroplast
54NC_007602GATC314912114913111 Nicotiana tomentosiformis chloroplast
55NC_007898GATC314878014879011 Solanum lycopersicum chloroplast
56NC_007943GATC314872114873111 Solanum bulbocastanum chloroplast
57NC_007944GATC3390523906211 Gossypium hirsutum chloroplast
58NC_007957GATC3405204053011 Vitis vinifera chloroplast
59NC_007977GATC3365673657711 Helianthus annuus chloroplast
60NC_008096GATC314867414868411 Solanum tuberosum chloroplast
61NC_008099GATC3850078501711 Oltmannsiellopsis viridis chloroplast
62NC_008325GATC3371343714411 Daucus carota chloroplast
63NC_008334GATC3494884949811 Citrus sinensis chloroplast
64NC_008359GATC3485914860111 Morus indica chloroplast
65NC_008359GATC3648206483112 Morus indica chloroplast
66NC_008535GATC314229914231012 Coffea arabica chloroplast
67NC_008602GATC3883068831712 Sorghum bicolor chloroplast
68NC_008641GATC3391033911311 Gossypium barbadense chloroplast
69NC_009600GATC34425443511 Illicium oligandrum chloroplast
70NC_009618GATC311429611430712 Cycas taitungensis chloroplast
71NC_010358GATC3647976480913 Oenothera argillicola chloroplast
72NC_010360GATC3653836539513 Oenothera glazioviana chloroplast
73NC_010361GATC3648546486613 Oenothera biennis chloroplast
74NC_010362GATC3642546426613 Oenothera parviflora chloroplast
75NC_010442GATC3659216593313 Trachelium caeruleum chloroplast
76NC_010601GATC3363173632711 Guizotia abyssinica chloroplast
77NC_011153GATC3828308284112 Pinus contorta chloroplast
78NC_011154GATC3821308214112 Pinus gerardiana chloroplast
79NC_011155GATC3819368194712 Pinus krempfii chloroplast
80NC_011156GATC3814458145612 Pinus lambertiana chloroplast
81NC_011158GATC3817338174412 Pinus monophylla chloroplast
82NC_011159GATC3820838209412 Pinus nelsonii chloroplast
83NC_012224GATC3285582856811 Jatropha curcas chloroplast
84NC_013086GATC3299492996012 Selaginella moellendorffii plastid
85NC_013273GATC3878848789512 Coix lacryma-jobi chloroplast