ChloroMitoSSRDB 2.0 Webserver cum Database of Cholorplast and Mitochondrial Microsatellites

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Chloroplast Motifs - Imperfect TGT Repeats

S.NoSequence IDMotifIterationsStartEndTract LengthSequence Name
1NC_016069TGT6214142143118Picea morrisonicola chloroplast
2NC_021109TGT618768318770119Pleodorina starrii plastid
3NC_016986TGT5770097702315Ginkgo biloba chloroplast
4NC_018523TGT5925099252315Saccharina japonica chloroplast
5NC_018541TGT514930214931615Elodea canadensis chloroplast
6NC_021618TGT515726315727715Grateloupia taiwanensis plastid
7NC_001675TGT59388940215 Cyanophora paradoxa cyanelle
8NC_001865TGT5992839929715 Chlorella vulgaris chloroplast
9NC_002202TGT511974811976215 Spinacia oleracea plastid
10NC_007407TGT512732112733515 Acorus calamus plastid
11NC_007957TGT5593865939914 Vitis vinifera chloroplast
12NC_008101TGT5681086812215 Scenedesmus obliquus chloroplast
13NC_009599TGT5177361774914 Buxus microphylla chloroplast
14NC_010093TGT512699112700515 Acorus americanus chloroplast
15NC_011031TGT513971413972815 Oedogonium cardiacum chloroplast
16NC_011087TGT415645415646512Paulinella chromatophora chromatophore
17NC_011087TGT457549157550212Paulinella chromatophora chromatophore
18NC_011087TGT460951660952611Paulinella chromatophora chromatophore
19NC_011087TGT473135973137012Paulinella chromatophora chromatophore
20NC_014267TGT4158941590512Kryptoperidinium foliaceum chloroplast
21NC_014287TGT45433544311Durinskia baltica chloroplast
22NC_014287TGT4138161382712Durinskia baltica chloroplast
23NC_014340TGT4910979110812Chromera velia strain CCMP2878 chloroplast
24NC_014573TGT4494094941911Geranium palmatum plastid
25NC_014573TGT4664876649812Geranium palmatum plastid
26NC_014582TGT4670326704211Monsonia speciosa plastid
27NC_014592TGT4249682497912Cheilanthes lindheimeri chloroplast
28NC_014699TGT4468684687811Equisetum arvense chloroplast
29NC_014699TGT4604866049712Equisetum arvense chloroplast
30NC_015083TGT410492510493511Erodium carvifolium chloroplast
31NC_015204TGT44959496911Gossypium thurberi chloroplast
32NC_015206TGT4175771758812Fragaria vesca subsp. vesca chloroplast
33NC_015359TGT4249312494212Chlorella variabilis plastid
34NC_015359TGT4989229893312Chlorella variabilis plastid
35NC_015402TGT4401084011811Ptilidium pulcherrimum chloroplast
36NC_015403TGT4467114672212Fistulifera sp. JPCC DA0580 chloroplast
37NC_015543TGT4280182802912Jacobaea vulgaris chloroplast
38NC_015605TGT4187841879411Nelumbo lutea chloroplast
39NC_015605TGT4614676147711Nelumbo lutea chloroplast
40NC_015608TGT414834114835212Olea woodiana subsp. woodiana chloroplast
41NC_015610TGT4189551896511Nelumbo nucifera chloroplast
42NC_015610TGT4615266153611Nelumbo nucifera chloroplast
43NC_015621TGT4284582846912Ageratina adenophora chloroplast
44NC_015645TGT4337333374311Schizomeris leibleinii chloroplast
45NC_015645TGT4994239943412Schizomeris leibleinii chloroplast
46NC_015645TGT410206110207212Schizomeris leibleinii chloroplast
47NC_015891TGT43789379911Spirodela polyrhiza chloroplast
48NC_015892TGT4178551786511Magnolia kwangsiensis chloroplast
49NC_015892TGT411822311823412Magnolia kwangsiensis chloroplast
50NC_015894TGT43378338811Wolffiella lingulata chloroplast
51NC_015899TGT43437344711Wolffia australiana chloroplast
52NC_016063TGT4191021911211Cephalotaxus wilsoniana chloroplast DNA
53NC_016063TGT4480694808012Cephalotaxus wilsoniana chloroplast DNA
54NC_016670TGT44961497111Gossypium darwinii chloroplast
55NC_016690TGT44954496411Gossypium tomentosum chloroplast
56NC_016692TGT44946495611Gossypium herbaceum subsp. africanum chloroplast
57NC_016703TGT4628446285411Phaeocystis antarctica strain CCMP1374 plastid
58NC_016703TGT4781907820112Phaeocystis antarctica strain CCMP1374 plastid
59NC_016703TGT4786057861511Phaeocystis antarctica strain CCMP1374 plastid
60NC_016708TGT4499134992412Millettia pinnata chloroplast
61NC_016711TGT44940495011Gossypium mustelinum chloroplast
62NC_016712TGT44946495611Gossypium arboreum chloroplast
63NC_016731TGT4415424155312Synedra acus chloroplast
64NC_016732TGT4169511696212Dunaliella salina chloroplast
65NC_016732TGT4436534366412Dunaliella salina chloroplast
66NC_016732TGT410050310051311Dunaliella salina chloroplast
67NC_016733TGT45254526411Pedinomonas minor chloroplast
68NC_016735TGT4625066251712Fucus vesiculosus chloroplast
69NC_016736TGT413567513568612Ricinus communis chloroplast
70NC_018051TGT4527445275512Vigna unguiculata chloroplast
71NC_018109TGT44886489611Gossypium incanum chloroplast
72NC_018110TGT44908491811Gossypium somalense chloroplast
73NC_018111TGT44942495211Gossypium capitis-viridis chloroplast
74NC_018111TGT4173121732211Gossypium capitis-viridis chloroplast
75NC_018112TGT44908491811Gossypium areysianum chloroplast
76NC_018113TGT45065507511Gossypium robinsonii chloroplast
77NC_018113TGT4174731748311Gossypium robinsonii chloroplast
78NC_018357TGT4178641787411Magnolia denudata chloroplast
79NC_018357TGT411845811846912Magnolia denudata chloroplast
80NC_018523TGT4401874019711Saccharina japonica chloroplast
81NC_018523TGT4693116932212Saccharina japonica chloroplast
82NC_018552TGT49094910512Capsicum annuum chloroplast
83NC_018569TGT413729813730811Trebouxiophyceae sp. MX-AZ01 chloroplast
84NC_018766TGT4175801759112Fragaria vesca subsp. bracteata chloroplast
85NC_018767TGT4175921760312Fragaria mandshurica plastid
86NC_019601TGT4175661757712Fragaria chiloensis chloroplast
87NC_019602TGT4175651757612Fragaria virginiana chloroplast
88NC_020092TGT4281952820612Chrysanthemum x morifolium chloroplast
89NC_020316TGT4179421795211Magnolia officinalis chloroplast
90NC_020317TGT4179731798311Magnolia officinalis subsp. biloba voucher SC001 chloroplast
91NC_020318TGT4178851789511Magnolia grandiflora voucher NJ016 chloroplast
92NC_020320TGT4282002821112Chrysanthemum indicum voucher HeN001 chloroplast
93NC_020321TGT410713510714612Taxus mairei voucher NN014 chloroplast
94NC_020361TGT4210032101311Podocarpus totara chloroplast
95NC_020460TGT4484074841812Euglena viridis culture-collection ATCC:PRA110 chloroplast
96NC_020460TGT4846828469312Euglena viridis culture-collection ATCC:PRA110 chloroplast
97NC_020607TGT4281832819412Artemisia frigida chloroplast
98NC_020795TGT4865588657013Chondrus crispus plastid complete genome
99NC_020795TGT4902909030112Chondrus crispus plastid complete genome
100NC_020795TGT411052411053512Chondrus crispus plastid complete genome
101NC_021075TGT411341811342811Calliarthron tuberculosum chloroplast
102NC_021091TGT4528075281812Vigna angularis chloroplast DNA
103NC_021109TGT4390923910211Pleodorina starrii plastid
104NC_021110TGT4189231893311Cephalotaxus oliveri chloroplast
105NC_021121TGT4757697578012Ardisia polysticta chloroplast
106NC_021189TGT415939915941012Pyropia haitanensis voucher PH-38 chloroplast
107NC_021425TGT4175941760411Tetracentron sinense chloroplast
108NC_021426TGT4184331844311Trochodendron aralioides chloroplast
109NC_021439TGT4123761238712Pinus massoniana chloroplast
110NC_021449TGT48173818412Utricularia gibba chloroplast
111NC_021455TGT410047010048011Prinsepia utilis plastid
112NC_021618TGT412731212732312Grateloupia taiwanensis plastid
113NC_021618TGT413511713512812Grateloupia taiwanensis plastid
114NC_021636TGT4504725048312Glycine tomentella voucher CSIRO:G1403 chloroplast
115NC_021636TGT4815388154811Glycine tomentella voucher CSIRO:G1403 chloroplast
116NC_021637TGT4647596476911Phaeocystis globosa strain Pg-G(A) chloroplast
117NC_021637TGT4800578006812Phaeocystis globosa strain Pg-G(A) chloroplast
118NC_021637TGT4804728048211Phaeocystis globosa strain Pg-G(A) chloroplast
119NC_021645TGT4503835039412Glycine cyrtoloba voucher CSIRO:G1267 chloroplast
120NC_021645TGT4813058131511Glycine cyrtoloba voucher CSIRO:G1267 chloroplast
121NC_021646TGT4504515046212Glycine stenophita voucher CSIRO:G1974 chloroplast
122NC_021646TGT4816508166011Glycine stenophita voucher CSIRO:G1974 chloroplast
123NC_021647TGT4504495046012Glycine canescens voucher CSIRO:G1232 chloroplast
124NC_021647TGT4813378134711Glycine canescens voucher CSIRO:G1232 chloroplast
125NC_021648TGT4504885049912Glycine dolichocarpa voucher CSIRO:G1134 chloroplast
126NC_021648TGT4815688157811Glycine dolichocarpa voucher CSIRO:G1134 chloroplast
127NC_021649TGT4506065061712Glycine falcata voucher CSIRO:G1718 chloroplast
128NC_021649TGT4817648177411Glycine falcata voucher CSIRO:G1718 chloroplast
129NC_021650TGT4504955050612Glycine syndetika voucher CSIRO:G1300 chloroplast
130NC_021650TGT4815918160111Glycine syndetika voucher CSIRO:G1300 chloroplast
131NC_021936TGT412610712611812Najas flexilis chloroplast
132NC_000927TGT4155441555411 Nephroselmis olivacea chloroplast
133NC_000927TGT411669211670312 Nephroselmis olivacea chloroplast
134NC_000932TGT414893314894311 Arabidopsis thaliana chloroplast
135NC_001603TGT4329183292912 Euglena gracilis chloroplast
136NC_001603TGT4347963480611 Euglena gracilis chloroplast
137NC_001631TGT4123211233212 Pinus thunbergii chloroplast
138NC_001713TGT4394593946911 Odontella sinensis chloroplast
139NC_001713TGT4744807449112 Odontella sinensis chloroplast
140NC_001713TGT4790827909211 Odontella sinensis chloroplast
141NC_001865TGT4803878039812 Chlorella vulgaris chloroplast
142NC_002186TGT4760547606411 Mesostigma viride chloroplast
143NC_002202TGT411163011164011 Spinacia oleracea plastid
144NC_002652TGT47695770511 Euglena longa plastid
145NC_002693TGT4548295484012 Oenothera elata subsp. hookeri plastid plastome I
146NC_002693TGT415796215797312 Oenothera elata subsp. hookeri plastid plastome I
147NC_004115TGT4110341104512 Chaetosphaeridium globosum chloroplast
148NC_004766TGT412542312543412 Adiantum capillus-veneris chloroplast
149NC_005086TGT4201102012011 Amborella trichopoda chloroplast
150NC_005353TGT4501535016412 Chlamydomonas reinhardtii chloroplast
151NC_006137TGT410329010330011 Gracilaria tenuistipitata var. liui chloroplast
152NC_007288TGT4118931190412 Emiliania huxleyi chloroplast
153NC_007578TGT4284942850512 Lactuca sativa chloroplast
154NC_007942TGT4500805009112 Glycine max chloroplast
155NC_007944TGT44954496411 Gossypium hirsutum chloroplast
156NC_007977TGT4286242863512 Helianthus annuus chloroplast
157NC_008097TGT4907109072011 Chara vulgaris chloroplast
158NC_008097TGT410118010119011 Chara vulgaris chloroplast
159NC_008099TGT4274092742012 Oltmannsiellopsis viridis chloroplast
160NC_008099TGT4887578876812 Oltmannsiellopsis viridis chloroplast
161NC_008099TGT4950819509313 Oltmannsiellopsis viridis chloroplast
162NC_008099TGT410502710503812 Oltmannsiellopsis viridis chloroplast
163NC_008101TGT4932239323412 Scenedesmus obliquus chloroplast
164NC_008101TGT411828011829213 Scenedesmus obliquus chloroplast
165NC_008116TGT4103401035112 Staurastrum punctulatum chloroplast
166NC_008117TGT4244072441913 Zygnema circumcarinatum chloroplast
167NC_008117TGT4273012731111 Zygnema circumcarinatum chloroplast
168NC_008117TGT4659286593811 Zygnema circumcarinatum chloroplast
169NC_008289TGT4344883449912 Ostreococcus tauri chloroplast
170NC_008326TGT4179771798711 Liriodendron tulipifera chloroplast
171NC_008372TGT4548715488212 Stigeoclonium helveticum chloroplast
172NC_008372TGT416386016387213 Stigeoclonium helveticum chloroplast
173NC_008407TGT4686256863612 Jasminum nudiflorum chloroplast
174NC_008454TGT4782967830611 Pelargonium x hortorum chloroplast
175NC_008457TGT4173721738211 Piper cenocladum chloroplast
176NC_008457TGT4297692977911 Piper cenocladum chloroplast
177NC_008589TGT4413504136112 Thalassiosira pseudonana chloroplast
178NC_008589TGT4980799809012 Thalassiosira pseudonana chloroplast
179NC_008641TGT44965497511 Gossypium barbadense chloroplast
180NC_008788TGT47100711213 Nuphar advena chloroplast
181NC_009259TGT4521155212612 Phaseolus vulgaris chloroplast
182NC_009265TGT4641556416511 Aethionema cordifolium chloroplast
183NC_009270TGT4561995621012 Capsella bursa-pastoris chloroplast
184NC_009600TGT4185541856411 Illicium oligandrum chloroplast
185NC_009601TGT48348835912 Dioscorea elephantipes chloroplast
186NC_009681TGT4655706558112 Leptosira terrestris chloroplast
187NC_009681TGT4824538246311 Leptosira terrestris chloroplast
188NC_009681TGT414267214268413 Leptosira terrestris chloroplast
189NC_009766TGT4560525606211 Cuscuta reflexa chloroplast
190NC_009962TGT4169241693411 Ceratophyllum demersum chloroplast
191NC_010109TGT43622363211 Lemna minor chloroplast
192NC_010358TGT4543015431212 Oenothera argillicola chloroplast
193NC_010358TGT415731115732212 Oenothera argillicola chloroplast
194NC_010360TGT4546005461112 Oenothera glazioviana chloroplast
195NC_010360TGT415742715743812 Oenothera glazioviana chloroplast
196NC_010361TGT4546775468812 Oenothera biennis chloroplast
197NC_010361TGT415715715716812 Oenothera biennis chloroplast
198NC_010362TGT4545855459612 Oenothera parviflora chloroplast
199NC_010362TGT415570215571312 Oenothera parviflora chloroplast
200NC_010601TGT4283962840712 Guizotia abyssinica chloroplast
201NC_011031TGT42788280013 Oedogonium cardiacum chloroplast
202NC_011031TGT4128871289812 Oedogonium cardiacum chloroplast
203NC_011031TGT417678117679212 Oedogonium cardiacum chloroplast
204NC_011031TGT417917217918413 Oedogonium cardiacum chloroplast
205NC_011031TGT419593519594713 Oedogonium cardiacum chloroplast
206NC_011163TGT4499704998112 Cicer arietinum chloroplast
207NC_011828TGT410566610567813 Trifolium subterraneum chloroplast
208NC_012097TGT4358463585712 Pycnococcus provasolii chloroplast
209NC_012099TGT4165151652612 Pyramimonas parkeae chloroplast
210NC_012099TGT4424004241112 Pyramimonas parkeae chloroplast
211NC_012099TGT4868658687612 Pyramimonas parkeae chloroplast
212NC_012224TGT414053514054612 Jatropha curcas chloroplast
213NC_012575TGT4163971640812 Micromonas sp. RCC299 chloroplast
214NC_012575TGT4453534536311 Micromonas sp. RCC299 chloroplast
215NC_012575TGT4554125542312 Micromonas sp. RCC299 chloroplast
216NC_012903TGT4628066281712 Aureoumbra lagunensis chloroplast
217NC_012978TGT4316023161312 Parachlorella kessleri chloroplast
218NC_012978TGT4358363584712 Parachlorella kessleri chloroplast
219NC_012978TGT4785357854511 Parachlorella kessleri chloroplast
220NC_013359TGT44585459511 Bryopsis hypnoides chloroplast
221NC_013359TGT410663910665012 Bryopsis hypnoides chloroplast
222NC_013359TGT411250911252012 Bryopsis hypnoides chloroplast
223NC_013498TGT4925569256712 Ectocarpus siliculosus chloroplast
224NC_013498TGT412254212255312 Ectocarpus siliculosus chloroplast
225NC_013553TGT4284432845412 Parthenium argentatum chloroplast
226NC_013703TGT42537254812 Cryptomonas paramecium plastid
227NC_013703TGT4171151712612 Cryptomonas paramecium plastid
228NC_013703TGT4364223643413 Cryptomonas paramecium plastid
229NC_013703TGT4384413845111 Cryptomonas paramecium plastid
230NC_013843TGT4527685277912 Vigna radiata chloroplast
231NC_014063TGT4635146352512 Lathyrus sativus chloroplast