Chloroplast Motifs - Imperfect AGTT Repeats
S.No | Sequence ID | Motif | Iterations | Start | End | Tract Length | Sequence Name |
---|---|---|---|---|---|---|---|
1 | NC_014287 | AGTT | 4 | 104074 | 104089 | 16 | Durinskia baltica chloroplast |
2 | NC_015308 | AGTT | 4 | 62531 | 62546 | 16 | Hevea brasiliensis chloroplast |
3 | NC_008588 | AGTT | 4 | 102180 | 102195 | 16 | Phaeodactylum tricornutum chloroplast |
4 | NC_008589 | AGTT | 4 | 103554 | 103569 | 16 | Thalassiosira pseudonana chloroplast |
5 | NC_010433 | AGTT | 4 | 62593 | 62608 | 16 | Manihot esculenta chloroplast |
6 | NC_010776 | AGTT | 4 | 83384 | 83398 | 15 | Fagopyrum esculentum subsp. ancestrale chloroplast |
7 | NC_014287 | AGTT | 3 | 45001 | 45011 | 11 | Durinskia baltica chloroplast |
8 | NC_014345 | AGTT | 3 | 42877 | 42888 | 12 | Alveolata sp. CCMP3155 chloroplast |
9 | NC_014569 | AGTT | 3 | 112104 | 112114 | 11 | Erodium texanum plastid |
10 | NC_014575 | AGTT | 3 | 10914 | 10924 | 11 | Cedrus deodara chloroplast |
11 | NC_015899 | AGTT | 3 | 70390 | 70400 | 11 | Wolffia australiana chloroplast |
12 | NC_016668 | AGTT | 3 | 117890 | 117900 | 11 | Gossypium raimondii chloroplast |
13 | NC_016670 | AGTT | 3 | 118070 | 118080 | 11 | Gossypium darwinii chloroplast |
14 | NC_016690 | AGTT | 3 | 118114 | 118124 | 11 | Gossypium tomentosum chloroplast |
15 | NC_016692 | AGTT | 3 | 117983 | 117993 | 11 | Gossypium herbaceum subsp. africanum chloroplast |
16 | NC_016703 | AGTT | 3 | 32569 | 32579 | 11 | Phaeocystis antarctica strain CCMP1374 plastid |
17 | NC_016711 | AGTT | 3 | 117997 | 118007 | 11 | Gossypium mustelinum chloroplast |
18 | NC_016712 | AGTT | 3 | 117912 | 117922 | 11 | Gossypium arboreum chloroplast |
19 | NC_016733 | AGTT | 3 | 24601 | 24612 | 12 | Pedinomonas minor chloroplast |
20 | NC_017894 | AGTT | 3 | 117964 | 117974 | 11 | Gossypium gossypioides chloroplast |
21 | NC_018109 | AGTT | 3 | 117016 | 117026 | 11 | Gossypium incanum chloroplast |
22 | NC_018110 | AGTT | 3 | 117297 | 117307 | 11 | Gossypium somalense chloroplast |
23 | NC_018111 | AGTT | 3 | 117246 | 117256 | 11 | Gossypium capitis-viridis chloroplast |
24 | NC_018112 | AGTT | 3 | 117329 | 117339 | 11 | Gossypium areysianum chloroplast |
25 | NC_018113 | AGTT | 3 | 117651 | 117661 | 11 | Gossypium robinsonii chloroplast |
26 | NC_020362 | AGTT | 3 | 118318 | 118328 | 11 | Heliconia collinsiana plastid |
27 | NC_020363 | AGTT | 3 | 113269 | 113279 | 11 | Zingiber spectabile plastid |
28 | NC_020364 | AGTT | 3 | 114529 | 114539 | 11 | Pseudophoenix vinifera plastid |
29 | NC_020365 | AGTT | 3 | 121110 | 121120 | 11 | Calamus caryotoides plastid |
30 | NC_021189 | AGTT | 3 | 38170 | 38180 | 11 | Pyropia haitanensis voucher PH-38 chloroplast |
31 | NC_021425 | AGTT | 3 | 51929 | 51940 | 12 | Tetracentron sinense chloroplast |
32 | NC_021426 | AGTT | 3 | 53039 | 53050 | 12 | Trochodendron aralioides chloroplast |
33 | NC_021637 | AGTT | 3 | 33594 | 33604 | 11 | Phaeocystis globosa strain Pg-G(A) chloroplast |
34 | NC_000925 | AGTT | 3 | 127317 | 127327 | 11 | Porphyra purpurea chloroplast |
35 | NC_000926 | AGTT | 3 | 61353 | 61364 | 12 | Guillardia theta chloroplast |
36 | NC_001319 | AGTT | 3 | 96162 | 96172 | 11 | Marchantia polymorpha chloroplast |
37 | NC_001603 | AGTT | 3 | 81941 | 81953 | 13 | Euglena gracilis chloroplast |
38 | NC_002652 | AGTT | 3 | 19352 | 19363 | 12 | Euglena longa plastid |
39 | NC_002693 | AGTT | 3 | 52397 | 52407 | 11 | Oenothera elata subsp. hookeri plastid plastome I |
40 | NC_003386 | AGTT | 3 | 110001 | 110012 | 12 | Psilotum nudum chloroplast |
41 | NC_004677 | AGTT | 3 | 60336 | 60346 | 11 | Pinus koraiensis chloroplast |
42 | NC_004766 | AGTT | 3 | 124250 | 124260 | 11 | Adiantum capillus-veneris chloroplast |
43 | NC_006861 | AGTT | 3 | 90856 | 90867 | 12 | Huperzia lucidula chloroplast |
44 | NC_007944 | AGTT | 3 | 117986 | 117996 | 11 | Gossypium hirsutum chloroplast |
45 | NC_008097 | AGTT | 3 | 5313 | 5324 | 12 | Chara vulgaris chloroplast |
46 | NC_008114 | AGTT | 3 | 170391 | 170402 | 12 | Pseudendoclonium akinetum chloroplast |
47 | NC_008116 | AGTT | 3 | 142689 | 142701 | 13 | Staurastrum punctulatum chloroplast |
48 | NC_008117 | AGTT | 3 | 42170 | 42180 | 11 | Zygnema circumcarinatum chloroplast |
49 | NC_008788 | AGTT | 3 | 55348 | 55359 | 12 | Nuphar advena chloroplast |
50 | NC_009268 | AGTT | 3 | 81186 | 81196 | 11 | Arabis hirsuta chloroplast |
51 | NC_009963 | AGTT | 3 | 3974 | 3985 | 12 | Cuscuta exaltata chloroplast |
52 | NC_010358 | AGTT | 3 | 51855 | 51865 | 11 | Oenothera argillicola chloroplast |
53 | NC_010360 | AGTT | 3 | 52168 | 52178 | 11 | Oenothera glazioviana chloroplast |
54 | NC_010361 | AGTT | 3 | 52246 | 52256 | 11 | Oenothera biennis chloroplast |
55 | NC_010362 | AGTT | 3 | 52131 | 52141 | 11 | Oenothera parviflora chloroplast |
56 | NC_011031 | AGTT | 3 | 51361 | 51371 | 11 | Oedogonium cardiacum chloroplast |
57 | NC_011152 | AGTT | 3 | 61772 | 61782 | 11 | Picea sitchensis chloroplast |
58 | NC_011154 | AGTT | 3 | 61031 | 61041 | 11 | Pinus gerardiana chloroplast |
59 | NC_011156 | AGTT | 3 | 60459 | 60469 | 11 | Pinus lambertiana chloroplast |
60 | NC_011158 | AGTT | 3 | 60664 | 60674 | 11 | Pinus monophylla chloroplast |
61 | NC_011159 | AGTT | 3 | 60843 | 60853 | 11 | Pinus nelsonii chloroplast |
62 | NC_011395 | AGTT | 3 | 28196 | 28206 | 11 | Babesia bovis T2Bo apicoplast |
63 | NC_011600 | AGTT | 3 | 60297 | 60307 | 11 | Vaucheria litorea chloroplast |