Chloroplast Motifs - Imperfect CTG Repeats
S.No | Sequence ID | Motif | Iterations | Start | End | Tract Length | Sequence Name |
---|---|---|---|---|---|---|---|
1 | NC_020795 | CTG | 7 | 17734 | 17754 | 21 | Chondrus crispus plastid complete genome |
2 | NC_021189 | CTG | 7 | 20425 | 20445 | 21 | Pyropia haitanensis voucher PH-38 chloroplast |
3 | NC_000925 | CTG | 7 | 20434 | 20454 | 21 | Porphyra purpurea chloroplast |
4 | NC_007932 | CTG | 7 | 20445 | 20465 | 21 | Porphyra yezoensis chloroplast |
5 | NC_001675 | CTG | 6 | 92597 | 92614 | 18 | Cyanophora paradoxa cyanelle |
6 | NC_011087 | CTG | 5 | 154771 | 154785 | 15 | Paulinella chromatophora chromatophore |
7 | NC_014267 | CTG | 5 | 54688 | 54702 | 15 | Kryptoperidinium foliaceum chloroplast |
8 | NC_016735 | CTG | 5 | 97086 | 97100 | 15 | Fucus vesiculosus chloroplast |
9 | NC_000925 | CTG | 5 | 30148 | 30162 | 15 | Porphyra purpurea chloroplast |
10 | NC_006137 | CTG | 5 | 17508 | 17522 | 15 | Gracilaria tenuistipitata var. liui chloroplast |
11 | NC_011087 | CTG | 4 | 220748 | 220759 | 12 | Paulinella chromatophora chromatophore |
12 | NC_011087 | CTG | 4 | 631694 | 631705 | 12 | Paulinella chromatophora chromatophore |
13 | NC_011087 | CTG | 4 | 639987 | 639998 | 12 | Paulinella chromatophora chromatophore |
14 | NC_011087 | CTG | 4 | 688417 | 688428 | 12 | Paulinella chromatophora chromatophore |
15 | NC_011087 | CTG | 4 | 932918 | 932929 | 12 | Paulinella chromatophora chromatophore |
16 | NC_011087 | CTG | 4 | 1002330 | 1002341 | 12 | Paulinella chromatophora chromatophore |
17 | NC_014575 | CTG | 4 | 29372 | 29383 | 12 | Cedrus deodara chloroplast |
18 | NC_014699 | CTG | 4 | 68317 | 68328 | 12 | Equisetum arvense chloroplast |
19 | NC_014808 | CTG | 4 | 116810 | 116821 | 12 | Thalassiosira oceanica CCMP1005 chloroplast |
20 | NC_015359 | CTG | 4 | 93525 | 93535 | 11 | Chlorella variabilis plastid |
21 | NC_015402 | CTG | 4 | 18528 | 18539 | 12 | Ptilidium pulcherrimum chloroplast |
22 | NC_015403 | CTG | 4 | 19539 | 19550 | 12 | Fistulifera sp. JPCC DA0580 chloroplast |
23 | NC_015543 | CTG | 4 | 77496 | 77508 | 13 | Jacobaea vulgaris chloroplast |
24 | NC_015621 | CTG | 4 | 78887 | 78899 | 13 | Ageratina adenophora chloroplast |
25 | NC_015892 | CTG | 4 | 73869 | 73880 | 12 | Magnolia kwangsiensis chloroplast |
26 | NC_016058 | CTG | 4 | 49598 | 49609 | 12 | Larix decidua chloroplast |
27 | NC_016064 | CTG | 4 | 81630 | 81641 | 12 | Pseudotsuga sinensis var. wilsoniana chloroplast |
28 | NC_016065 | CTG | 4 | 18534 | 18545 | 12 | Taiwania cryptomerioides chloroplast DNA |
29 | NC_016065 | CTG | 4 | 37087 | 37098 | 12 | Taiwania cryptomerioides chloroplast DNA |
30 | NC_016703 | CTG | 4 | 19242 | 19253 | 12 | Phaeocystis antarctica strain CCMP1374 plastid |
31 | NC_016727 | CTG | 4 | 68376 | 68387 | 12 | Silene vulgaris chloroplast |
32 | NC_016728 | CTG | 4 | 51249 | 51260 | 12 | Silene noctiflora chloroplast |
33 | NC_016732 | CTG | 4 | 226089 | 226100 | 12 | Dunaliella salina chloroplast |
34 | NC_016733 | CTG | 4 | 96683 | 96694 | 12 | Pedinomonas minor chloroplast |
35 | NC_016736 | CTG | 4 | 75355 | 75366 | 12 | Ricinus communis chloroplast |
36 | NC_018051 | CTG | 4 | 70004 | 70015 | 12 | Vigna unguiculata chloroplast |
37 | NC_018357 | CTG | 4 | 73960 | 73971 | 12 | Magnolia denudata chloroplast |
38 | NC_018523 | CTG | 4 | 49519 | 49530 | 12 | Saccharina japonica chloroplast |
39 | NC_020092 | CTG | 4 | 77477 | 77489 | 13 | Chrysanthemum x morifolium chloroplast |
40 | NC_020316 | CTG | 4 | 74041 | 74052 | 12 | Magnolia officinalis chloroplast |
41 | NC_020317 | CTG | 4 | 74043 | 74054 | 12 | Magnolia officinalis subsp. biloba voucher SC001 chloroplast |
42 | NC_020318 | CTG | 4 | 73613 | 73624 | 12 | Magnolia grandiflora voucher NJ016 chloroplast |
43 | NC_020319 | CTG | 4 | 78044 | 78055 | 12 | Cycas revoluta chloroplast |
44 | NC_020320 | CTG | 4 | 77434 | 77446 | 13 | Chrysanthemum indicum voucher HeN001 chloroplast |
45 | NC_020321 | CTG | 4 | 17936 | 17947 | 12 | Taxus mairei voucher NN014 chloroplast |
46 | NC_020321 | CTG | 4 | 37588 | 37599 | 12 | Taxus mairei voucher NN014 chloroplast |
47 | NC_020363 | CTG | 4 | 80866 | 80877 | 12 | Zingiber spectabile plastid |
48 | NC_020371 | CTG | 4 | 43427 | 43438 | 12 | Pavlova lutheri chloroplast |
49 | NC_020607 | CTG | 4 | 77433 | 77445 | 13 | Artemisia frigida chloroplast |
50 | NC_020795 | CTG | 4 | 179209 | 179220 | 12 | Chondrus crispus plastid complete genome |
51 | NC_021075 | CTG | 4 | 153358 | 153369 | 12 | Calliarthron tuberculosum chloroplast |
52 | NC_021091 | CTG | 4 | 70445 | 70456 | 12 | Vigna angularis chloroplast DNA |
53 | NC_021189 | CTG | 4 | 30195 | 30206 | 12 | Pyropia haitanensis voucher PH-38 chloroplast |
54 | NC_021437 | CTG | 4 | 18721 | 18732 | 12 | Cunninghamia lanceolata chloroplast |
55 | NC_021437 | CTG | 4 | 39170 | 39181 | 12 | Cunninghamia lanceolata chloroplast |
56 | NC_021439 | CTG | 4 | 80211 | 80222 | 12 | Pinus massoniana chloroplast |
57 | NC_021440 | CTG | 4 | 80957 | 80968 | 12 | Pinus taeda chloroplast |
58 | NC_021441 | CTG | 4 | 18498 | 18509 | 12 | Taiwania flousiana chloroplast |
59 | NC_021441 | CTG | 4 | 37097 | 37108 | 12 | Taiwania flousiana chloroplast |
60 | NC_021636 | CTG | 4 | 48217 | 48228 | 12 | Glycine tomentella voucher CSIRO:G1403 chloroplast |
61 | NC_021636 | CTG | 4 | 69231 | 69242 | 12 | Glycine tomentella voucher CSIRO:G1403 chloroplast |
62 | NC_021637 | CTG | 4 | 20450 | 20461 | 12 | Phaeocystis globosa strain Pg-G(A) chloroplast |
63 | NC_021645 | CTG | 4 | 48124 | 48135 | 12 | Glycine cyrtoloba voucher CSIRO:G1267 chloroplast |
64 | NC_021645 | CTG | 4 | 69056 | 69067 | 12 | Glycine cyrtoloba voucher CSIRO:G1267 chloroplast |
65 | NC_021646 | CTG | 4 | 48189 | 48200 | 12 | Glycine stenophita voucher CSIRO:G1974 chloroplast |
66 | NC_021646 | CTG | 4 | 69373 | 69384 | 12 | Glycine stenophita voucher CSIRO:G1974 chloroplast |
67 | NC_021647 | CTG | 4 | 48195 | 48206 | 12 | Glycine canescens voucher CSIRO:G1232 chloroplast |
68 | NC_021647 | CTG | 4 | 69048 | 69059 | 12 | Glycine canescens voucher CSIRO:G1232 chloroplast |
69 | NC_021648 | CTG | 4 | 48234 | 48245 | 12 | Glycine dolichocarpa voucher CSIRO:G1134 chloroplast |
70 | NC_021648 | CTG | 4 | 69265 | 69276 | 12 | Glycine dolichocarpa voucher CSIRO:G1134 chloroplast |
71 | NC_021649 | CTG | 4 | 48352 | 48363 | 12 | Glycine falcata voucher CSIRO:G1718 chloroplast |
72 | NC_021649 | CTG | 4 | 69463 | 69474 | 12 | Glycine falcata voucher CSIRO:G1718 chloroplast |
73 | NC_021650 | CTG | 4 | 48241 | 48252 | 12 | Glycine syndetika voucher CSIRO:G1300 chloroplast |
74 | NC_021650 | CTG | 4 | 69282 | 69293 | 12 | Glycine syndetika voucher CSIRO:G1300 chloroplast |
75 | NC_000925 | CTG | 4 | 129365 | 129376 | 12 | Porphyra purpurea chloroplast |
76 | NC_000926 | CTG | 4 | 6910 | 6921 | 12 | Guillardia theta chloroplast |
77 | NC_001319 | CTG | 4 | 18030 | 18041 | 12 | Marchantia polymorpha chloroplast |
78 | NC_001631 | CTG | 4 | 80204 | 80215 | 12 | Pinus thunbergii chloroplast |
79 | NC_001713 | CTG | 4 | 72243 | 72254 | 12 | Odontella sinensis chloroplast |
80 | NC_002186 | CTG | 4 | 26548 | 26559 | 12 | Mesostigma viride chloroplast |
81 | NC_002186 | CTG | 4 | 110308 | 110322 | 15 | Mesostigma viride chloroplast |
82 | NC_002693 | CTG | 4 | 30045 | 30056 | 12 | Oenothera elata subsp. hookeri plastid plastome I |
83 | NC_002694 | CTG | 4 | 67601 | 67612 | 12 | Lotus japonicus chloroplast |
84 | NC_004115 | CTG | 4 | 107966 | 107976 | 11 | Chaetosphaeridium globosum chloroplast |
85 | NC_004677 | CTG | 4 | 78736 | 78747 | 12 | Pinus koraiensis chloroplast |
86 | NC_004799 | CTG | 4 | 43684 | 43695 | 12 | Cyanidioschyzon merolae strain 10D chloroplast |
87 | NC_007288 | CTG | 4 | 65756 | 65767 | 12 | Emiliania huxleyi chloroplast |
88 | NC_007578 | CTG | 4 | 78771 | 78783 | 13 | Lactuca sativa chloroplast |
89 | NC_007942 | CTG | 4 | 47834 | 47845 | 12 | Glycine max chloroplast |
90 | NC_007942 | CTG | 4 | 68558 | 68569 | 12 | Glycine max chloroplast |
91 | NC_007977 | CTG | 4 | 78200 | 78212 | 13 | Helianthus annuus chloroplast |
92 | NC_008097 | CTG | 4 | 25273 | 25284 | 12 | Chara vulgaris chloroplast |
93 | NC_008114 | CTG | 4 | 36539 | 36550 | 12 | Pseudendoclonium akinetum chloroplast |
94 | NC_008235 | CTG | 4 | 70370 | 70381 | 12 | Populus alba chloroplast |
95 | NC_008326 | CTG | 4 | 74010 | 74021 | 12 | Liriodendron tulipifera chloroplast |
96 | NC_008334 | CTG | 4 | 70664 | 70674 | 11 | Citrus sinensis chloroplast |
97 | NC_008588 | CTG | 4 | 87198 | 87209 | 12 | Phaeodactylum tricornutum chloroplast |
98 | NC_008589 | CTG | 4 | 104375 | 104386 | 12 | Thalassiosira pseudonana chloroplast |
99 | NC_009143 | CTG | 4 | 70815 | 70826 | 12 | Populus trichocarpa chloroplast |
100 | NC_009259 | CTG | 4 | 69026 | 69037 | 12 | Phaseolus vulgaris chloroplast |
101 | NC_009681 | CTG | 4 | 91660 | 91671 | 12 | Leptosira terrestris chloroplast |
102 | NC_009681 | CTG | 4 | 136265 | 136276 | 12 | Leptosira terrestris chloroplast |
103 | NC_010358 | CTG | 4 | 29543 | 29554 | 12 | Oenothera argillicola chloroplast |
104 | NC_010360 | CTG | 4 | 29900 | 29911 | 12 | Oenothera glazioviana chloroplast |
105 | NC_010361 | CTG | 4 | 29991 | 30002 | 12 | Oenothera biennis chloroplast |
106 | NC_010362 | CTG | 4 | 29816 | 29827 | 12 | Oenothera parviflora chloroplast |
107 | NC_010548 | CTG | 4 | 59031 | 59042 | 12 | Cryptomeria japonica chloroplast |
108 | NC_010601 | CTG | 4 | 78257 | 78269 | 13 | Guizotia abyssinica chloroplast |
109 | NC_010654 | CTG | 4 | 31411 | 31422 | 12 | Welwitschia mirabilis chloroplast |
110 | NC_010772 | CTG | 4 | 16762 | 16773 | 12 | Heterosigma akashiwo chloroplast |
111 | NC_011152 | CTG | 4 | 80532 | 80543 | 12 | Picea sitchensis chloroplast |
112 | NC_011153 | CTG | 4 | 80267 | 80278 | 12 | Pinus contorta chloroplast |
113 | NC_011154 | CTG | 4 | 79578 | 79589 | 12 | Pinus gerardiana chloroplast |
114 | NC_011155 | CTG | 4 | 79384 | 79395 | 12 | Pinus krempfii chloroplast |
115 | NC_011156 | CTG | 4 | 78893 | 78904 | 12 | Pinus lambertiana chloroplast |
116 | NC_011158 | CTG | 4 | 79181 | 79192 | 12 | Pinus monophylla chloroplast |
117 | NC_011159 | CTG | 4 | 79526 | 79537 | 12 | Pinus nelsonii chloroplast |
118 | NC_011930 | CTG | 4 | 1053 | 1064 | 12 | Keteleeria davidiana chloroplast |
119 | NC_011942 | CTG | 4 | 1645 | 1656 | 12 | Gnetum parvifolium chloroplast |
120 | NC_012099 | CTG | 4 | 99278 | 99289 | 12 | Pyramimonas parkeae chloroplast |
121 | NC_012575 | CTG | 4 | 45438 | 45449 | 12 | Micromonas sp. RCC299 chloroplast |
122 | NC_012978 | CTG | 4 | 115348 | 115359 | 12 | Parachlorella kessleri chloroplast |
123 | NC_013498 | CTG | 4 | 105738 | 105749 | 12 | Ectocarpus siliculosus chloroplast |
124 | NC_013553 | CTG | 4 | 79304 | 79316 | 13 | Parthenium argentatum chloroplast |
125 | NC_013843 | CTG | 4 | 70028 | 70039 | 12 | Vigna radiata chloroplast |