Chloroplast Motifs - Imperfect CAGA Repeats
S.No | Sequence ID | Motif | Iterations | Start | End | Tract Length | Sequence Name |
---|---|---|---|---|---|---|---|
1 | NC_014569 | CAGA | 3 | 47616 | 47627 | 12 | Erodium texanum plastid |
2 | NC_014569 | CAGA | 3 | 88756 | 88767 | 12 | Erodium texanum plastid |
3 | NC_015803 | CAGA | 3 | 51044 | 51054 | 11 | Indocalamus longiauritus plastid |
4 | NC_015817 | CAGA | 3 | 50986 | 50996 | 11 | Phyllostachys edulis chloroplast |
5 | NC_015820 | CAGA | 3 | 51031 | 51041 | 11 | Acidosasa purpurea chloroplast |
6 | NC_015826 | CAGA | 3 | 50959 | 50969 | 11 | Phyllostachys nigra var. henonis chloroplast |
7 | NC_015830 | CAGA | 3 | 50589 | 50599 | 11 | Bambusa emeiensis chloroplast |
8 | NC_015831 | CAGA | 3 | 50721 | 50731 | 11 | Ferrocalamus rimosivaginus plastid |
9 | NC_015990 | CAGA | 3 | 49988 | 49998 | 11 | Panicum virgatum chloroplast |
10 | NC_016677 | CAGA | 3 | 49424 | 49434 | 11 | Leersia tisserantii plastid |
11 | NC_016699 | CAGA | 3 | 50991 | 51001 | 11 | Phyllostachys propinqua chloroplast |
12 | NC_016718 | CAGA | 3 | 49214 | 49224 | 11 | Rhynchoryza subulata plastid |
13 | NC_016927 | CAGA | 3 | 48155 | 48165 | 11 | Oryza meridionalis chloroplast |
14 | NC_017006 | CAGA | 3 | 71106 | 71116 | 11 | Mankyua chejuensis chloroplast |
15 | NC_017835 | CAGA | 3 | 48143 | 48153 | 11 | Oryza rufipogon chloroplast |
16 | NC_019648 | CAGA | 3 | 48179 | 48189 | 11 | Festuca altissima plastid |
17 | NC_019649 | CAGA | 3 | 47046 | 47056 | 11 | Festuca ovina plastid |
18 | NC_019650 | CAGA | 3 | 48178 | 48188 | 11 | Festuca pratensis plastid |
19 | NC_019651 | CAGA | 3 | 48092 | 48102 | 11 | Lolium multiflorum plastid |
20 | NC_020341 | CAGA | 3 | 50960 | 50970 | 11 | Arundinaria gigantea chloroplast |
21 | NC_021760 | CAGA | 3 | 48572 | 48582 | 11 | Triticum monococcum chloroplast |
22 | NC_021761 | CAGA | 3 | 48633 | 48643 | 11 | Secale cereale chloroplast |
23 | NC_021762 | CAGA | 3 | 48544 | 48554 | 11 | Triticum urartu chloroplast |
24 | NC_022133 | CAGA | 3 | 48434 | 48444 | 11 | Aegilops tauschii chloroplast |
25 | NC_022135 | CAGA | 3 | 48623 | 48633 | 11 | Aegilops speltoides isolate SPE0661 chloroplast |
26 | NC_000927 | CAGA | 3 | 70913 | 70923 | 11 | Nephroselmis olivacea chloroplast |
27 | NC_001320 | CAGA | 3 | 48164 | 48174 | 11 | Oryza sativa Japonica Group plastid |
28 | NC_002762 | CAGA | 3 | 48748 | 48758 | 11 | Triticum aestivum chloroplast |
29 | NC_005973 | CAGA | 3 | 48084 | 48094 | 11 | Oryza nivara chloroplast |
30 | NC_008155 | CAGA | 3 | 48105 | 48115 | 11 | Oryza sativa Indica Group chloroplast |
31 | NC_008535 | CAGA | 3 | 49541 | 49551 | 11 | Coffea arabica chloroplast |
32 | NC_008590 | CAGA | 3 | 48959 | 48969 | 11 | Hordeum vulgare subsp. vulgare chloroplast |
33 | NC_008591 | CAGA | 3 | 48657 | 48667 | 11 | Agrostis stolonifera chloroplast |
34 | NC_009950 | CAGA | 3 | 48225 | 48235 | 11 | Lolium perenne chloroplast |
35 | NC_011032 | CAGA | 3 | 48237 | 48247 | 11 | Brachypodium distachyon chloroplast |
36 | NC_011713 | CAGA | 3 | 48676 | 48686 | 11 | Festuca arundinacea chloroplast |
37 | NC_012927 | CAGA | 3 | 50454 | 50464 | 11 | Bambusa oldhamii chloroplast |
38 | NC_013088 | CAGA | 3 | 50630 | 50640 | 11 | Dendrocalamus latiflorus chloroplast |
39 | NC_013273 | CAGA | 3 | 50936 | 50946 | 11 | Coix lacryma-jobi chloroplast |
40 | NC_014063 | CAGA | 3 | 68659 | 68669 | 11 | Lathyrus sativus chloroplast |