Chloroplast Motifs - Imperfect TTAG Repeats
S.No | Sequence ID | Motif | Iterations | Start | End | Tract Length | Sequence Name |
---|---|---|---|---|---|---|---|
1 | NC_011087 | TTAG | 3 | 1010367 | 1010379 | 13 | Paulinella chromatophora chromatophore |
2 | NC_014340 | TTAG | 3 | 107622 | 107633 | 12 | Chromera velia strain CCMP2878 chloroplast |
3 | NC_014582 | TTAG | 3 | 114377 | 114388 | 12 | Monsonia speciosa plastid |
4 | NC_015308 | TTAG | 3 | 73843 | 73854 | 12 | Hevea brasiliensis chloroplast |
5 | NC_015645 | TTAG | 3 | 118910 | 118922 | 13 | Schizomeris leibleinii chloroplast |
6 | NC_015891 | TTAG | 3 | 81244 | 81255 | 12 | Spirodela polyrhiza chloroplast |
7 | NC_015899 | TTAG | 3 | 6081 | 6092 | 12 | Wolffia australiana chloroplast |
8 | NC_015899 | TTAG | 3 | 81444 | 81455 | 12 | Wolffia australiana chloroplast |
9 | NC_016471 | TTAG | 3 | 59026 | 59036 | 11 | Neottia nidus-avis plastid |
10 | NC_016732 | TTAG | 3 | 43951 | 43962 | 12 | Dunaliella salina chloroplast |
11 | NC_016921 | TTAG | 3 | 23301 | 23311 | 11 | Pentactina rupicola chloroplast |
12 | NC_018523 | TTAG | 3 | 24452 | 24462 | 11 | Saccharina japonica chloroplast |
13 | NC_020363 | TTAG | 3 | 84198 | 84208 | 11 | Zingiber spectabile plastid |
14 | NC_020795 | TTAG | 3 | 113520 | 113531 | 12 | Chondrus crispus plastid complete genome |
15 | NC_021075 | TTAG | 3 | 67154 | 67165 | 12 | Calliarthron tuberculosum chloroplast |
16 | NC_021075 | TTAG | 3 | 149165 | 149175 | 11 | Calliarthron tuberculosum chloroplast |
17 | NC_021101 | TTAG | 3 | 8672 | 8682 | 11 | Francoa sonchifolia plastid |
18 | NC_021425 | TTAG | 3 | 49514 | 49524 | 11 | Tetracentron sinense chloroplast |
19 | NC_021426 | TTAG | 3 | 50547 | 50557 | 11 | Trochodendron aralioides chloroplast |
20 | NC_021437 | TTAG | 3 | 32199 | 32209 | 11 | Cunninghamia lanceolata chloroplast |
21 | NC_021618 | TTAG | 3 | 9815 | 9826 | 12 | Grateloupia taiwanensis plastid |
22 | NC_021936 | TTAG | 3 | 50405 | 50415 | 11 | Najas flexilis chloroplast |
23 | NC_000932 | TTAG | 3 | 99821 | 99833 | 13 | Arabidopsis thaliana chloroplast |
24 | NC_001603 | TTAG | 3 | 35141 | 35151 | 11 | Euglena gracilis chloroplast |
25 | NC_001840 | TTAG | 3 | 155941 | 155953 | 13 | Cyanidium caldarium chloroplast |
26 | NC_001865 | TTAG | 3 | 89612 | 89622 | 11 | Chlorella vulgaris chloroplast |
27 | NC_003386 | TTAG | 3 | 8728 | 8738 | 11 | Psilotum nudum chloroplast |
28 | NC_003386 | TTAG | 3 | 59336 | 59348 | 13 | Psilotum nudum chloroplast |
29 | NC_003386 | TTAG | 3 | 135986 | 135996 | 11 | Psilotum nudum chloroplast |
30 | NC_004115 | TTAG | 3 | 31602 | 31612 | 11 | Chaetosphaeridium globosum chloroplast |
31 | NC_004823 | TTAG | 3 | 33188 | 33199 | 12 | Eimeria tenella strain Penn State apicoplast |
32 | NC_004993 | TTAG | 3 | 55963 | 55974 | 12 | Calycanthus floridus var. glaucus chloroplast |
33 | NC_005086 | TTAG | 3 | 15793 | 15803 | 11 | Amborella trichopoda chloroplast |
34 | NC_007957 | TTAG | 3 | 4497 | 4507 | 11 | Vitis vinifera chloroplast |
35 | NC_008114 | TTAG | 3 | 74875 | 74885 | 11 | Pseudendoclonium akinetum chloroplast |
36 | NC_008117 | TTAG | 3 | 84639 | 84650 | 12 | Zygnema circumcarinatum chloroplast |
37 | NC_008235 | TTAG | 3 | 127337 | 127348 | 12 | Populus alba chloroplast |
38 | NC_008325 | TTAG | 3 | 49067 | 49077 | 11 | Daucus carota chloroplast |
39 | NC_008334 | TTAG | 3 | 62183 | 62194 | 12 | Citrus sinensis chloroplast |
40 | NC_008372 | TTAG | 3 | 166902 | 166914 | 13 | Stigeoclonium helveticum chloroplast |
41 | NC_008454 | TTAG | 3 | 50630 | 50640 | 11 | Pelargonium x hortorum chloroplast |
42 | NC_008457 | TTAG | 3 | 77903 | 77914 | 12 | Piper cenocladum chloroplast |
43 | NC_009143 | TTAG | 3 | 127869 | 127880 | 12 | Populus trichocarpa chloroplast |
44 | NC_009273 | TTAG | 3 | 99637 | 99649 | 13 | Lepidium virginicum chloroplast |
45 | NC_009573 | TTAG | 3 | 10907 | 10918 | 12 | Rhodomonas salina chloroplast |
46 | NC_009681 | TTAG | 3 | 91903 | 91913 | 11 | Leptosira terrestris chloroplast |
47 | NC_009681 | TTAG | 3 | 101742 | 101752 | 11 | Leptosira terrestris chloroplast |
48 | NC_009681 | TTAG | 3 | 119911 | 119921 | 11 | Leptosira terrestris chloroplast |
49 | NC_009962 | TTAG | 3 | 30675 | 30685 | 11 | Ceratophyllum demersum chloroplast |
50 | NC_010109 | TTAG | 3 | 79724 | 79735 | 12 | Lemna minor chloroplast |
51 | NC_010433 | TTAG | 3 | 74033 | 74044 | 12 | Manihot esculenta chloroplast |
52 | NC_010548 | TTAG | 3 | 92513 | 92523 | 11 | Cryptomeria japonica chloroplast |
53 | NC_011395 | TTAG | 3 | 2792 | 2802 | 11 | Babesia bovis T2Bo apicoplast |
54 | NC_011395 | TTAG | 3 | 13049 | 13059 | 11 | Babesia bovis T2Bo apicoplast |
55 | NC_012818 | TTAG | 3 | 98725 | 98736 | 12 | Alsophila spinulosa chloroplast |
56 | NC_012978 | TTAG | 3 | 1274 | 1284 | 11 | Parachlorella kessleri chloroplast |
57 | NC_014062 | TTAG | 3 | 64616 | 64626 | 11 | Anomochloa marantoidea chloroplast |