Chloroplast Motifs - Imperfect CGAT Repeats
S.No | Sequence ID | Motif | Iterations | Start | End | Tract Length | Sequence Name |
---|---|---|---|---|---|---|---|
1 | NC_014676 | CGAT | 3 | 156137 | 156149 | 13 | Theobroma cacao chloroplast |
2 | NC_015204 | CGAT | 3 | 155808 | 155820 | 13 | Gossypium thurberi chloroplast |
3 | NC_015401 | CGAT | 3 | 151449 | 151461 | 13 | Olea europaea subsp. europaea plastid |
4 | NC_015604 | CGAT | 3 | 151436 | 151448 | 13 | Olea europaea subsp. cuspidata chloroplast |
5 | NC_015605 | CGAT | 3 | 20097 | 20109 | 13 | Nelumbo lutea chloroplast |
6 | NC_015608 | CGAT | 3 | 151518 | 151530 | 13 | Olea woodiana subsp. woodiana chloroplast |
7 | NC_015610 | CGAT | 3 | 20268 | 20280 | 13 | Nelumbo nucifera chloroplast |
8 | NC_015623 | CGAT | 3 | 151470 | 151482 | 13 | Olea europaea subsp. maroccana chloroplast |
9 | NC_015891 | CGAT | 3 | 2795 | 2805 | 11 | Spirodela polyrhiza chloroplast |
10 | NC_015894 | CGAT | 3 | 132136 | 132147 | 12 | Wolffiella lingulata chloroplast |
11 | NC_015899 | CGAT | 3 | 131465 | 131476 | 12 | Wolffia australiana chloroplast |
12 | NC_016058 | CGAT | 3 | 85388 | 85400 | 13 | Larix decidua chloroplast |
13 | NC_016064 | CGAT | 3 | 116233 | 116245 | 13 | Pseudotsuga sinensis var. wilsoniana chloroplast |
14 | NC_016668 | CGAT | 3 | 155653 | 155665 | 13 | Gossypium raimondii chloroplast |
15 | NC_016670 | CGAT | 3 | 155925 | 155937 | 13 | Gossypium darwinii chloroplast |
16 | NC_016690 | CGAT | 3 | 155980 | 155992 | 13 | Gossypium tomentosum chloroplast |
17 | NC_016692 | CGAT | 3 | 155858 | 155870 | 13 | Gossypium herbaceum subsp. africanum chloroplast |
18 | NC_016708 | CGAT | 3 | 148252 | 148264 | 13 | Millettia pinnata chloroplast |
19 | NC_016711 | CGAT | 3 | 155853 | 155865 | 13 | Gossypium mustelinum chloroplast |
20 | NC_016712 | CGAT | 3 | 155773 | 155785 | 13 | Gossypium arboreum chloroplast |
21 | NC_016727 | CGAT | 3 | 147785 | 147797 | 13 | Silene vulgaris chloroplast |
22 | NC_016728 | CGAT | 3 | 148915 | 148927 | 13 | Silene noctiflora chloroplast |
23 | NC_016729 | CGAT | 3 | 144852 | 144864 | 13 | Silene conica chloroplast |
24 | NC_016730 | CGAT | 3 | 147947 | 147959 | 13 | Silene latifolia chloroplast |
25 | NC_016753 | CGAT | 3 | 124350 | 124361 | 12 | Colocasia esculenta chloroplast |
26 | NC_017894 | CGAT | 3 | 155516 | 155528 | 13 | Gossypium gossypioides chloroplast |
27 | NC_018109 | CGAT | 3 | 154759 | 154771 | 13 | Gossypium incanum chloroplast |
28 | NC_018110 | CGAT | 3 | 155081 | 155093 | 13 | Gossypium somalense chloroplast |
29 | NC_018111 | CGAT | 3 | 155010 | 155022 | 13 | Gossypium capitis-viridis chloroplast |
30 | NC_018112 | CGAT | 3 | 155114 | 155126 | 13 | Gossypium areysianum chloroplast |
31 | NC_018113 | CGAT | 3 | 155391 | 155403 | 13 | Gossypium robinsonii chloroplast |
32 | NC_020019 | CGAT | 3 | 152624 | 152636 | 13 | Camellia sinensis chloroplast |
33 | NC_020431 | CGAT | 3 | 146874 | 146886 | 13 | Salvia miltiorrhiza chloroplast |
34 | NC_021121 | CGAT | 3 | 152025 | 152037 | 13 | Ardisia polysticta chloroplast |
35 | NC_021423 | CGAT | 3 | 100765 | 100775 | 11 | Catharanthus roseus cultivar Pacifica Punch Halo chloroplast |
36 | NC_021637 | CGAT | 3 | 66529 | 66539 | 11 | Phaeocystis globosa strain Pg-G(A) chloroplast |
37 | NC_022136 | CGAT | 3 | 77797 | 77811 | 15 | Lygodium japonicum chloroplast |
38 | NC_002693 | CGAT | 3 | 159175 | 159187 | 13 | Oenothera elata subsp. hookeri plastid plastome I |
39 | NC_002693 | CGAT | 3 | 161463 | 161475 | 13 | Oenothera elata subsp. hookeri plastid plastome I |
40 | NC_002694 | CGAT | 3 | 145782 | 145794 | 13 | Lotus japonicus chloroplast |
41 | NC_004993 | CGAT | 3 | 118674 | 118685 | 12 | Calycanthus floridus var. glaucus chloroplast |
42 | NC_007407 | CGAT | 3 | 117648 | 117659 | 12 | Acorus calamus plastid |
43 | NC_007944 | CGAT | 3 | 155848 | 155860 | 13 | Gossypium hirsutum chloroplast |
44 | NC_008407 | CGAT | 3 | 161387 | 161399 | 13 | Jasminum nudiflorum chloroplast |
45 | NC_008535 | CGAT | 3 | 150691 | 150703 | 13 | Coffea arabica chloroplast |
46 | NC_008588 | CGAT | 3 | 73570 | 73580 | 11 | Phaeodactylum tricornutum chloroplast |
47 | NC_008641 | CGAT | 3 | 155880 | 155892 | 13 | Gossypium barbadense chloroplast |
48 | NC_009766 | CGAT | 3 | 82590 | 82602 | 13 | Cuscuta reflexa chloroplast |
49 | NC_009808 | CGAT | 3 | 154743 | 154755 | 13 | Ipomoea purpurea chloroplast |
50 | NC_009949 | CGAT | 3 | 1755 | 1765 | 11 | Cuscuta obtusiflora chloroplast |
51 | NC_009963 | CGAT | 3 | 85848 | 85860 | 13 | Cuscuta exaltata chloroplast |
52 | NC_010093 | CGAT | 3 | 117319 | 117330 | 12 | Acorus americanus chloroplast |
53 | NC_010358 | CGAT | 3 | 158521 | 158533 | 13 | Oenothera argillicola chloroplast |
54 | NC_010358 | CGAT | 3 | 160764 | 160776 | 13 | Oenothera argillicola chloroplast |
55 | NC_010360 | CGAT | 3 | 158640 | 158652 | 13 | Oenothera glazioviana chloroplast |
56 | NC_010360 | CGAT | 3 | 160928 | 160940 | 13 | Oenothera glazioviana chloroplast |
57 | NC_010361 | CGAT | 3 | 158370 | 158382 | 13 | Oenothera biennis chloroplast |
58 | NC_010361 | CGAT | 3 | 160658 | 160670 | 13 | Oenothera biennis chloroplast |
59 | NC_010362 | CGAT | 3 | 156912 | 156924 | 13 | Oenothera parviflora chloroplast |
60 | NC_010362 | CGAT | 3 | 159203 | 159215 | 13 | Oenothera parviflora chloroplast |
61 | NC_011158 | CGAT | 3 | 110194 | 110206 | 13 | Pinus monophylla chloroplast |
62 | NC_011159 | CGAT | 3 | 110585 | 110597 | 13 | Pinus nelsonii chloroplast |
63 | NC_011930 | CGAT | 3 | 34140 | 34152 | 13 | Keteleeria davidiana chloroplast |
64 | NC_013086 | CGAT | 3 | 133528 | 133538 | 11 | Selaginella moellendorffii plastid |
65 | NC_013553 | CGAT | 3 | 37028 | 37038 | 11 | Parthenium argentatum chloroplast |
66 | NC_013707 | CGAT | 3 | 151439 | 151451 | 13 | Olea europaea chloroplast |