ChloroMitoSSRDB 2.0 Webserver cum Database of Cholorplast and Mitochondrial Microsatellites

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Chloroplast Motifs - Imperfect CGAT Repeats

S.NoSequence IDMotifIterationsStartEndTract LengthSequence Name
1NC_014676CGAT315613715614913Theobroma cacao chloroplast
2NC_015204CGAT315580815582013Gossypium thurberi chloroplast
3NC_015401CGAT315144915146113Olea europaea subsp. europaea plastid
4NC_015604CGAT315143615144813Olea europaea subsp. cuspidata chloroplast
5NC_015605CGAT3200972010913Nelumbo lutea chloroplast
6NC_015608CGAT315151815153013Olea woodiana subsp. woodiana chloroplast
7NC_015610CGAT3202682028013Nelumbo nucifera chloroplast
8NC_015623CGAT315147015148213Olea europaea subsp. maroccana chloroplast
9NC_015891CGAT32795280511Spirodela polyrhiza chloroplast
10NC_015894CGAT313213613214712Wolffiella lingulata chloroplast
11NC_015899CGAT313146513147612Wolffia australiana chloroplast
12NC_016058CGAT3853888540013Larix decidua chloroplast
13NC_016064CGAT311623311624513Pseudotsuga sinensis var. wilsoniana chloroplast
14NC_016668CGAT315565315566513Gossypium raimondii chloroplast
15NC_016670CGAT315592515593713Gossypium darwinii chloroplast
16NC_016690CGAT315598015599213Gossypium tomentosum chloroplast
17NC_016692CGAT315585815587013Gossypium herbaceum subsp. africanum chloroplast
18NC_016708CGAT314825214826413Millettia pinnata chloroplast
19NC_016711CGAT315585315586513Gossypium mustelinum chloroplast
20NC_016712CGAT315577315578513Gossypium arboreum chloroplast
21NC_016727CGAT314778514779713Silene vulgaris chloroplast
22NC_016728CGAT314891514892713Silene noctiflora chloroplast
23NC_016729CGAT314485214486413Silene conica chloroplast
24NC_016730CGAT314794714795913Silene latifolia chloroplast
25NC_016753CGAT312435012436112Colocasia esculenta chloroplast
26NC_017894CGAT315551615552813Gossypium gossypioides chloroplast
27NC_018109CGAT315475915477113Gossypium incanum chloroplast
28NC_018110CGAT315508115509313Gossypium somalense chloroplast
29NC_018111CGAT315501015502213Gossypium capitis-viridis chloroplast
30NC_018112CGAT315511415512613Gossypium areysianum chloroplast
31NC_018113CGAT315539115540313Gossypium robinsonii chloroplast
32NC_020019CGAT315262415263613Camellia sinensis chloroplast
33NC_020431CGAT314687414688613Salvia miltiorrhiza chloroplast
34NC_021121CGAT315202515203713Ardisia polysticta chloroplast
35NC_021423CGAT310076510077511Catharanthus roseus cultivar Pacifica Punch Halo chloroplast
36NC_021637CGAT3665296653911Phaeocystis globosa strain Pg-G(A) chloroplast
37NC_022136CGAT3777977781115Lygodium japonicum chloroplast
38NC_002693CGAT315917515918713 Oenothera elata subsp. hookeri plastid plastome I
39NC_002693CGAT316146316147513 Oenothera elata subsp. hookeri plastid plastome I
40NC_002694CGAT314578214579413 Lotus japonicus chloroplast
41NC_004993CGAT311867411868512 Calycanthus floridus var. glaucus chloroplast
42NC_007407CGAT311764811765912 Acorus calamus plastid
43NC_007944CGAT315584815586013 Gossypium hirsutum chloroplast
44NC_008407CGAT316138716139913 Jasminum nudiflorum chloroplast
45NC_008535CGAT315069115070313 Coffea arabica chloroplast
46NC_008588CGAT3735707358011 Phaeodactylum tricornutum chloroplast
47NC_008641CGAT315588015589213 Gossypium barbadense chloroplast
48NC_009766CGAT3825908260213 Cuscuta reflexa chloroplast
49NC_009808CGAT315474315475513 Ipomoea purpurea chloroplast
50NC_009949CGAT31755176511 Cuscuta obtusiflora chloroplast
51NC_009963CGAT3858488586013 Cuscuta exaltata chloroplast
52NC_010093CGAT311731911733012 Acorus americanus chloroplast
53NC_010358CGAT315852115853313 Oenothera argillicola chloroplast
54NC_010358CGAT316076416077613 Oenothera argillicola chloroplast
55NC_010360CGAT315864015865213 Oenothera glazioviana chloroplast
56NC_010360CGAT316092816094013 Oenothera glazioviana chloroplast
57NC_010361CGAT315837015838213 Oenothera biennis chloroplast
58NC_010361CGAT316065816067013 Oenothera biennis chloroplast
59NC_010362CGAT315691215692413 Oenothera parviflora chloroplast
60NC_010362CGAT315920315921513 Oenothera parviflora chloroplast
61NC_011158CGAT311019411020613 Pinus monophylla chloroplast
62NC_011159CGAT311058511059713 Pinus nelsonii chloroplast
63NC_011930CGAT3341403415213 Keteleeria davidiana chloroplast
64NC_013086CGAT313352813353811 Selaginella moellendorffii plastid
65NC_013553CGAT3370283703811 Parthenium argentatum chloroplast
66NC_013707CGAT315143915145113 Olea europaea chloroplast