ChloroMitoSSRDB 2.0 Webserver cum Database of Cholorplast and Mitochondrial Microsatellites

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Chloroplast Motifs - Imperfect TTTGTT Repeats

S.NoSequence IDMotifIterationsStartEndTract LengthSequence Name
1NC_014592TTTGTT314036214038019Cheilanthes lindheimeri chloroplast
2NC_014674TTTGTT310358110359919Castanea mollissima chloroplast
3NC_014676TTTGTT310295510297319Theobroma cacao chloroplast
4NC_014697TTTGTT3995829960019Prunus persica chloroplast
5NC_014807TTTGTT310208510210319Corynocarpus laevigata chloroplast
6NC_015113TTTGTT3975139753119Anthriscus cerefolium chloroplast
7NC_015139TTTGTT3968639688119Brassica rapa subsp. pekinensis chloroplast
8NC_015204TTTGTT310234210236019Gossypium thurberi chloroplast
9NC_015206TTTGTT3989909900819Fragaria vesca subsp. vesca chloroplast
10NC_015308TTTGTT310296110297919Hevea brasiliensis chloroplast
11NC_015401TTTGTT3997339975119Olea europaea subsp. europaea plastid
12NC_015543TTTGTT3956159563319Jacobaea vulgaris chloroplast
13NC_015604TTTGTT3997419975919Olea europaea subsp. cuspidata chloroplast
14NC_015605TTTGTT310538510540319Nelumbo lutea chloroplast
15NC_015608TTTGTT3998249984219Olea woodiana subsp. woodiana chloroplast
16NC_015610TTTGTT310549010550819Nelumbo nucifera chloroplast
17NC_015621TTTGTT3630016301818Ageratina adenophora chloroplast
18NC_015621TTTGTT3977239774119Ageratina adenophora chloroplast
19NC_015623TTTGTT3997529977019Olea europaea subsp. maroccana chloroplast
20NC_015803TTTGTT3918779189519Indocalamus longiauritus plastid
21NC_015817TTTGTT3918179183519Phyllostachys edulis chloroplast
22NC_015820TTTGTT3918759189319Acidosasa purpurea chloroplast
23NC_015826TTTGTT3918389185619Phyllostachys nigra var. henonis chloroplast
24NC_015830TTTGTT3915919160919Bambusa emeiensis chloroplast
25NC_015831TTTGTT3917209173819Ferrocalamus rimosivaginus plastid
26NC_015891TTTGTT310486210488019Spirodela polyrhiza chloroplast
27NC_015892TTTGTT310155910157719Magnolia kwangsiensis chloroplast
28NC_015894TTTGTT310549910551719Wolffiella lingulata chloroplast
29NC_015899TTTGTT310509310511119Wolffia australiana chloroplast
30NC_015983TTTGTT3994419945919Cucumis melo subsp. melo chloroplast
31NC_015990TTTGTT3913989141619Panicum virgatum chloroplast
32NC_015996TTTGTT310145310147119Pyrus pyrifolia chloroplast
33NC_016430TTTGTT3994779949519Eleutherococcus senticosus chloroplast
34NC_016433TTTGTT3977919780919Sesamum indicum chloroplast
35NC_016468TTTGTT3978429786019Boea hygrometrica chloroplast
36NC_016471TTTGTT3506185063619Neottia nidus-avis plastid
37NC_016668TTTGTT310231210233019Gossypium raimondii chloroplast
38NC_016670TTTGTT310248610250419Gossypium darwinii chloroplast
39NC_016677TTTGTT3895598957719Leersia tisserantii plastid
40NC_016690TTTGTT310251210253019Gossypium tomentosum chloroplast
41NC_016692TTTGTT310237410239219Gossypium herbaceum subsp. africanum chloroplast
42NC_016699TTTGTT3918309184819Phyllostachys propinqua chloroplast
43NC_016708TTTGTT3966689668619Millettia pinnata chloroplast
44NC_016711TTTGTT310240310242119Gossypium mustelinum chloroplast
45NC_016712TTTGTT310230610232419Gossypium arboreum chloroplast
46NC_016718TTTGTT3897268974419Rhynchoryza subulata plastid
47NC_016727TTTGTT3948139483119Silene vulgaris chloroplast
48NC_016728TTTGTT3901629018019Silene noctiflora chloroplast
49NC_016730TTTGTT3952479526519Silene latifolia chloroplast
50NC_016734TTTGTT3966119662919Brassica napus chloroplast
51NC_016736TTTGTT310400310402119Ricinus communis chloroplast
52NC_016753TTTGTT310344310346119Colocasia esculenta chloroplast
53NC_016921TTTGTT3986439866119Pentactina rupicola chloroplast
54NC_016927TTTGTT3882538827119Oryza meridionalis chloroplast
55NC_017602TTTGTT3991679918519Elaeis guineensis chloroplast
56NC_017609TTTGTT310003610005419Phalaenopsis equestris chloroplast
57NC_017835TTTGTT3882428826019Oryza rufipogon chloroplast
58NC_017894TTTGTT310239110240919Gossypium gossypioides chloroplast
59NC_018051TTTGTT3951539517119Vigna unguiculata chloroplast
60NC_018109TTTGTT310147310149119Gossypium incanum chloroplast
61NC_018110TTTGTT310175010176819Gossypium somalense chloroplast
62NC_018111TTTGTT310168310170119Gossypium capitis-viridis chloroplast
63NC_018112TTTGTT310178210180019Gossypium areysianum chloroplast
64NC_018113TTTGTT310209410211219Gossypium robinsonii chloroplast
65NC_018114TTTGTT3962429626019Erycina pusilla chloroplast
66NC_018357TTTGTT310166610168419Magnolia denudata chloroplast
67NC_018541TTTGTT3990829910019Elodea canadensis chloroplast
68NC_018565TTTGTT3975149753219Pachycladon enysii chloroplast
69NC_018766TTTGTT3990409905819Fragaria vesca subsp. bracteata chloroplast
70NC_018767TTTGTT3990529907019Fragaria mandshurica plastid
71NC_019601TTTGTT3989449896219Fragaria chiloensis chloroplast
72NC_019602TTTGTT3989639898119Fragaria virginiana chloroplast
73NC_019648TTTGTT3883428836019Festuca altissima plastid
74NC_019649TTTGTT3868178683519Festuca ovina plastid
75NC_019650TTTGTT3884638848119Festuca pratensis plastid
76NC_019651TTTGTT3883758839319Lolium multiflorum plastid
77NC_020019TTTGTT3999399995719Camellia sinensis chloroplast
78NC_020092TTTGTT3957339575119Chrysanthemum x morifolium chloroplast
79NC_020098TTTGTT3981799819719Tectona grandis chloroplast
80NC_020152TTTGTT310371010372819Quercus rubra plastid
81NC_020316TTTGTT310177510179319Magnolia officinalis chloroplast
82NC_020317TTTGTT310175110176919Magnolia officinalis subsp. biloba voucher SC001 chloroplast
83NC_020318TTTGTT310131110132919Magnolia grandiflora voucher NJ016 chloroplast
84NC_020320TTTGTT3956829570019Chrysanthemum indicum voucher HeN001 chloroplast
85NC_020341TTTGTT3912369125419Arundinaria gigantea chloroplast
86NC_020362TTTGTT310371710373519Heliconia collinsiana plastid
87NC_020363TTTGTT3992289924619Zingiber spectabile plastid
88NC_020364TTTGTT3998519986919Pseudophoenix vinifera plastid
89NC_020365TTTGTT3996729969019Calamus caryotoides plastid
90NC_020366TTTGTT310054410056219Bismarckia nobilis plastid
91NC_020367TTTGTT310041610043419Dasypogon bromeliifolius plastid
92NC_020431TTTGTT3957799579719Salvia miltiorrhiza chloroplast
93NC_020607TTTGTT3956809569819Artemisia frigida chloroplast
94NC_021091TTTGTT3955579557519Vigna angularis chloroplast DNA
95NC_021101TTTGTT3996019961919Francoa sonchifolia plastid
96NC_021102TTTGTT3971499716719Pachycladon cheesemanii chloroplast
97NC_021111TTTGTT3109171093519Cistanche deserticola chloroplast
98NC_021121TTTGTT3993489936619Ardisia polysticta chloroplast
99NC_021372TTTGTT3931309314819Pharus latifolius chloroplast
100NC_021423TTTGTT3989299894719Catharanthus roseus cultivar Pacifica Punch Halo chloroplast
101NC_021425TTTGTT310185110186919Tetracentron sinense chloroplast
102NC_021426TTTGTT310298710300519Trochodendron aralioides chloroplast
103NC_021429TTTGTT3997569977419Cymbidium aloifolium voucher KUN:YJB100604 chloroplast
104NC_021430TTTGTT3990509906819Cymbidium sinense voucher KUN:YJB100605 chloroplast
105NC_021431TTTGTT3990979911519Cymbidium tortisepalum voucher KUN:HJL091027 chloroplast
106NC_021432TTTGTT3990549907219Cymbidium tracyanum voucher KUN:YJB100606 chloroplast
107NC_021433TTTGTT3990669908419Cymbidium mannii voucher KUN:YJB100602 chloroplast
108NC_021449TTTGTT3946039462119Utricularia gibba chloroplast
109NC_021455TTTGTT3987809879819Prinsepia utilis plastid
110NC_021636TTTGTT3971139713119Glycine tomentella voucher CSIRO:G1403 chloroplast
111NC_021645TTTGTT3969699698719Glycine cyrtoloba voucher CSIRO:G1267 chloroplast
112NC_021646TTTGTT3972799729719Glycine stenophita voucher CSIRO:G1974 chloroplast
113NC_021647TTTGTT3969019691919Glycine canescens voucher CSIRO:G1232 chloroplast
114NC_021648TTTGTT3971559717319Glycine dolichocarpa voucher CSIRO:G1134 chloroplast
115NC_021649TTTGTT3973789739619Glycine falcata voucher CSIRO:G1718 chloroplast
116NC_021650TTTGTT3971669718419Glycine syndetika voucher CSIRO:G1300 chloroplast
117NC_021760TTTGTT3905529057019Triticum monococcum chloroplast
118NC_021761TTTGTT3889848900219Secale cereale chloroplast
119NC_021762TTTGTT3899278994519Triticum urartu chloroplast
120NC_022133TTTGTT3882678828519Aegilops tauschii chloroplast
121NC_022135TTTGTT3876738769119Aegilops speltoides isolate SPE0661 chloroplast
122NC_000932TTTGTT3977769779419 Arabidopsis thaliana chloroplast
123NC_001320TTTGTT3882458826319 Oryza sativa Japonica Group plastid
124NC_001666TTTGTT3920739209119 Zea mays chloroplast
125NC_002202TTTGTT3950919510919 Spinacia oleracea plastid
126NC_002694TTTGTT3954139543119 Lotus japonicus chloroplast
127NC_002762TTTGTT3880078802519 Triticum aestivum chloroplast
128NC_004993TTTGTT3989109892819 Calycanthus floridus var. glaucus chloroplast
129NC_005086TTTGTT310450810452619 Amborella trichopoda chloroplast
130NC_005878TTTGTT3132151323319 Saccharum hybrid cultivar SP-80-3280 chloroplast
131NC_005973TTTGTT3881928821019 Oryza nivara chloroplast
132NC_006050TTTGTT310347010348819 Nymphaea alba chloroplast
133NC_006084TTTGTT3927729279019 Saccharum hybrid cultivar NCo 310 chloroplast
134NC_006290TTTGTT3987869880419 Panax ginseng chloroplast
135NC_007144TTTGTT3992589927619 Cucumis sativus chloroplast
136NC_007407TTTGTT3966949671219 Acorus calamus plastid
137NC_007499TTTGTT39999610001419 Phalaenopsis aphrodite subsp. formosana chloroplast
138NC_007578TTTGTT3632146323118 Lactuca sativa chloroplast
139NC_007578TTTGTT3970259704319 Lactuca sativa chloroplast
140NC_007942TTTGTT3965199653719 Glycine max chloroplast
141NC_007944TTTGTT310239710241519 Gossypium hirsutum chloroplast
142NC_007957TTTGTT310276410278219 Vitis vinifera chloroplast
143NC_007977TTTGTT3960579607519 Helianthus annuus chloroplast
144NC_008155TTTGTT3881978821519 Oryza sativa Indica Group chloroplast
145NC_008235TTTGTT3986989871619 Populus alba chloroplast
146NC_008325TTTGTT3967929681019 Daucus carota chloroplast
147NC_008326TTTGTT310167310169119 Liriodendron tulipifera chloroplast
148NC_008335TTTGTT310518510520319 Platanus occidentalis chloroplast
149NC_008336TTTGTT3990629908019 Nandina domestica chloroplast
150NC_008359TTTGTT310051310053119 Morus indica chloroplast
151NC_008456TTTGTT310264310266119 Drimys granadensis chloroplast
152NC_008457TTTGTT310133010134819 Piper cenocladum chloroplast
153NC_008535TTTGTT3984209843819 Coffea arabica chloroplast
154NC_008590TTTGTT3896358965319 Hordeum vulgare subsp. vulgare chloroplast
155NC_008591TTTGTT3896838970119 Agrostis stolonifera chloroplast
156NC_008602TTTGTT3929389295619 Sorghum bicolor chloroplast
157NC_008641TTTGTT310242710244519 Gossypium barbadense chloroplast
158NC_008788TTTGTT310407910409719 Nuphar advena chloroplast
159NC_008796TTTGTT3978209783819 Ranunculus macranthus chloroplast
160NC_009143TTTGTT3992189923619 Populus trichocarpa chloroplast
161NC_009259TTTGTT3940599407719 Phaseolus vulgaris chloroplast
162NC_009265TTTGTT3970289704619 Aethionema cordifolium chloroplast
163NC_009266TTTGTT3970739709119 Aethionema grandiflorum chloroplast
164NC_009267TTTGTT3974769749419 Olimarabidopsis pumila chloroplast
165NC_009268TTTGTT3964279644519 Arabis hirsuta chloroplast
166NC_009269TTTGTT3970209703819 Barbarea verna chloroplast
167NC_009270TTTGTT3973209733819 Capsella bursa-pastoris chloroplast
168NC_009272TTTGTT3959949601219 Draba nemorosa chloroplast
169NC_009273TTTGTT3976069762419 Lepidium virginicum chloroplast
170NC_009274TTTGTT3960089602619 Lobularia maritima chloroplast
171NC_009275TTTGTT3978699788719 Nasturtium officinale chloroplast
172NC_009598TTTGTT310013810015619 Chloranthus spicatus chloroplast
173NC_009599TTTGTT310173710175519 Buxus microphylla chloroplast
174NC_009600TTTGTT310096110097919 Illicium oligandrum chloroplast
175NC_009601TTTGTT3962899630719 Dioscorea elephantipes chloroplast
176NC_009766TTTGTT3598785989518 Cuscuta reflexa chloroplast
177NC_009950TTTGTT3884928851019 Lolium perenne chloroplast
178NC_009962TTTGTT3996089962619 Ceratophyllum demersum chloroplast
179NC_010093TTTGTT3963699638719 Acorus americanus chloroplast
180NC_010109TTTGTT310318910320719 Lemna minor chloroplast
181NC_010323TTTGTT310243910245719 Carica papaya chloroplast
182NC_010433TTTGTT310316210318019 Manihot esculenta chloroplast
183NC_010601TTTGTT3964909650819 Guizotia abyssinica chloroplast
184NC_011032TTTGTT3880668808419 Brachypodium distachyon chloroplast
185NC_011163TTTGTT3953799539719 Cicer arietinum chloroplast
186NC_011713TTTGTT3892038922119 Festuca arundinacea chloroplast
187NC_012224TTTGTT310523010524819 Jatropha curcas chloroplast
188NC_012615TTTGTT310201910203719 Megaleranthis saniculifolia chloroplast
189NC_012927TTTGTT3914889150619 Bambusa oldhamii chloroplast
190NC_013088TTTGTT3915759159319 Dendrocalamus latiflorus chloroplast
191NC_013273TTTGTT3925169253419 Coix lacryma-jobi chloroplast
192NC_013553TTTGTT3975799759719 Parthenium argentatum chloroplast
193NC_013823TTTGTT310334610336419 Typha latifolia chloroplast
194NC_013843TTTGTT3951779519519 Vigna radiata chloroplast
195NC_013991TTTGTT310036210038019 Phoenix dactylifera chloroplast
196NC_014056TTTGTT3961789619619 Oncidium Gower Ramsey chloroplast
197NC_014062TTTGTT3894798949719 Anomochloa marantoidea chloroplast
198NC_013707TTTGTT3997199973719 Olea europaea chloroplast