Chloroplast Motifs - Imperfect GAAGGA Repeats
S.No | Sequence ID | Motif | Iterations | Start | End | Tract Length | Sequence Name |
---|---|---|---|---|---|---|---|
1 | NC_007602 | GAAGGA | 3 | 130450 | 130467 | 18 | Nicotiana tomentosiformis chloroplast |
2 | NC_008359 | GAAGGA | 3 | 95760 | 95777 | 18 | Morus indica chloroplast |
3 | NC_008336 | GAAGGA | 3 | 93880 | 93897 | 18 | Nandina domestica chloroplast |
4 | NC_008334 | GAAGGA | 3 | 96701 | 96718 | 18 | Citrus sinensis chloroplast |
5 | NC_008115 | GAAGGA | 3 | 97344 | 97361 | 18 | Eucalyptus globulus subsp. globulus chloroplast |
6 | NC_008096 | GAAGGA | 3 | 129951 | 129968 | 18 | Solanum tuberosum chloroplast |
7 | NC_007944 | GAAGGA | 3 | 97211 | 97228 | 18 | Gossypium hirsutum chloroplast |
8 | NC_007943 | GAAGGA | 3 | 129998 | 130015 | 18 | Solanum bulbocastanum chloroplast |
9 | NC_007898 | GAAGGA | 3 | 130098 | 130115 | 18 | Solanum lycopersicum chloroplast |
10 | NC_008456 | GAAGGA | 3 | 97425 | 97442 | 18 | Drimys granadensis chloroplast |
11 | NC_007500 | GAAGGA | 3 | 130720 | 130737 | 18 | Nicotiana sylvestris chloroplast |
12 | NC_006290 | GAAGGA | 3 | 93924 | 93941 | 18 | Panax ginseng chloroplast |
13 | NC_006050 | GAAGGA | 3 | 98213 | 98230 | 18 | Nymphaea alba chloroplast |
14 | NC_005086 | GAAGGA | 3 | 99290 | 99307 | 18 | Amborella trichopoda chloroplast |
15 | NC_004561 | GAAGGA | 3 | 131346 | 131363 | 18 | Atropa belladonna chloroplast |
16 | NC_001879 | GAAGGA | 3 | 130722 | 130739 | 18 | Nicotiana tabacum plastid |
17 | NC_000932 | GAAGGA | 3 | 92675 | 92692 | 18 | Arabidopsis thaliana chloroplast |
18 | NC_021426 | GAAGGA | 3 | 98051 | 98068 | 18 | Trochodendron aralioides chloroplast |
19 | NC_021425 | GAAGGA | 3 | 96895 | 96912 | 18 | Tetracentron sinense chloroplast |
20 | NC_009270 | GAAGGA | 3 | 92225 | 92242 | 18 | Capsella bursa-pastoris chloroplast |
21 | NC_010323 | GAAGGA | 3 | 97295 | 97312 | 18 | Carica papaya chloroplast |
22 | NC_009601 | GAAGGA | 3 | 91219 | 91236 | 18 | Dioscorea elephantipes chloroplast |
23 | NC_009598 | GAAGGA | 3 | 95446 | 95463 | 18 | Chloranthus spicatus chloroplast |
24 | NC_009275 | GAAGGA | 3 | 92769 | 92786 | 18 | Nasturtium officinale chloroplast |
25 | NC_009274 | GAAGGA | 3 | 90891 | 90908 | 18 | Lobularia maritima chloroplast |
26 | NC_009273 | GAAGGA | 3 | 92513 | 92530 | 18 | Lepidium virginicum chloroplast |
27 | NC_009272 | GAAGGA | 3 | 90905 | 90922 | 18 | Draba nemorosa chloroplast |
28 | NC_009271 | GAAGGA | 3 | 92619 | 92636 | 18 | Crucihimalaya wallichii chloroplast |
29 | NC_021121 | GAAGGA | 3 | 94510 | 94527 | 18 | Ardisia polysticta chloroplast |
30 | NC_009269 | GAAGGA | 3 | 91929 | 91946 | 18 | Barbarea verna chloroplast |
31 | NC_009268 | GAAGGA | 3 | 91328 | 91345 | 18 | Arabis hirsuta chloroplast |
32 | NC_009267 | GAAGGA | 3 | 92380 | 92397 | 18 | Olimarabidopsis pumila chloroplast |
33 | NC_009266 | GAAGGA | 3 | 91976 | 91993 | 18 | Aethionema grandiflorum chloroplast |
34 | NC_009265 | GAAGGA | 3 | 91928 | 91945 | 18 | Aethionema cordifolium chloroplast |
35 | NC_008788 | GAAGGA | 3 | 98812 | 98829 | 18 | Nuphar advena chloroplast |
36 | NC_008641 | GAAGGA | 3 | 97241 | 97258 | 18 | Gossypium barbadense chloroplast |
37 | NC_008457 | GAAGGA | 3 | 96120 | 96137 | 18 | Piper cenocladum chloroplast |
38 | NC_015610 | GAAGGA | 3 | 100262 | 100279 | 18 | Nelumbo nucifera chloroplast |
39 | NC_016670 | GAAGGA | 3 | 97300 | 97317 | 18 | Gossypium darwinii chloroplast |
40 | NC_016668 | GAAGGA | 3 | 97131 | 97148 | 18 | Gossypium raimondii chloroplast |
41 | NC_016430 | GAAGGA | 3 | 94614 | 94631 | 18 | Eleutherococcus senticosus chloroplast |
42 | NC_016068 | GAAGGA | 3 | 130653 | 130670 | 18 | Nicotiana undulata chloroplast |
43 | NC_015892 | GAAGGA | 3 | 96336 | 96353 | 18 | Magnolia kwangsiensis chloroplast |
44 | NC_016690 | GAAGGA | 3 | 97326 | 97343 | 18 | Gossypium tomentosum chloroplast |
45 | NC_015605 | GAAGGA | 3 | 100157 | 100174 | 18 | Nelumbo lutea chloroplast |
46 | NC_015204 | GAAGGA | 3 | 97162 | 97179 | 18 | Gossypium thurberi chloroplast |
47 | NC_014676 | GAAGGA | 3 | 97784 | 97801 | 18 | Theobroma cacao chloroplast |
48 | NC_014570 | GAAGGA | 3 | 97217 | 97234 | 18 | Eucalyptus grandis chloroplast |
49 | NC_018113 | GAAGGA | 3 | 96913 | 96930 | 18 | Gossypium robinsonii chloroplast |
50 | NC_021102 | GAAGGA | 3 | 92040 | 92057 | 18 | Pachycladon cheesemanii chloroplast |
51 | NC_020318 | GAAGGA | 3 | 96079 | 96096 | 18 | Magnolia grandiflora voucher NJ016 chloroplast |
52 | NC_020317 | GAAGGA | 3 | 96519 | 96536 | 18 | Magnolia officinalis subsp. biloba voucher SC001 chloroplast |
53 | NC_020316 | GAAGGA | 3 | 96543 | 96560 | 18 | Magnolia officinalis chloroplast |
54 | NC_018565 | GAAGGA | 3 | 92414 | 92431 | 18 | Pachycladon enysii chloroplast |
55 | NC_018552 | GAAGGA | 3 | 131222 | 131239 | 18 | Capsicum annuum chloroplast |
56 | NC_018552 | GAAGGA | 3 | 131174 | 131191 | 18 | Capsicum annuum chloroplast |
57 | NC_018357 | GAAGGA | 3 | 96434 | 96451 | 18 | Magnolia denudata chloroplast |
58 | NC_018112 | GAAGGA | 3 | 96609 | 96626 | 18 | Gossypium areysianum chloroplast |
59 | NC_018111 | GAAGGA | 3 | 96509 | 96526 | 18 | Gossypium capitis-viridis chloroplast |
60 | NC_018110 | GAAGGA | 3 | 96577 | 96594 | 18 | Gossypium somalense chloroplast |
61 | NC_018109 | GAAGGA | 3 | 96294 | 96311 | 18 | Gossypium incanum chloroplast |
62 | NC_017894 | GAAGGA | 3 | 97215 | 97232 | 18 | Gossypium gossypioides chloroplast |
63 | NC_016712 | GAAGGA | 3 | 97126 | 97143 | 18 | Gossypium arboreum chloroplast |
64 | NC_016711 | GAAGGA | 3 | 97217 | 97234 | 18 | Gossypium mustelinum chloroplast |
65 | NC_016692 | GAAGGA | 3 | 97194 | 97211 | 18 | Gossypium herbaceum subsp. africanum chloroplast |