Chloroplast Motifs - Imperfect TAGG Repeats
S.No | Sequence ID | Motif | Iterations | Start | End | Tract Length | Sequence Name |
---|---|---|---|---|---|---|---|
1 | NC_021372 | TAGG | 6 | 54297 | 54319 | 23 | Pharus latifolius chloroplast |
2 | NC_015803 | TAGG | 4 | 54219 | 54234 | 16 | Indocalamus longiauritus plastid |
3 | NC_015817 | TAGG | 4 | 54161 | 54176 | 16 | Phyllostachys edulis chloroplast |
4 | NC_015820 | TAGG | 4 | 54212 | 54227 | 16 | Acidosasa purpurea chloroplast |
5 | NC_015826 | TAGG | 4 | 54134 | 54149 | 16 | Phyllostachys nigra var. henonis chloroplast |
6 | NC_015830 | TAGG | 4 | 53933 | 53948 | 16 | Bambusa emeiensis chloroplast |
7 | NC_015831 | TAGG | 4 | 53893 | 53908 | 16 | Ferrocalamus rimosivaginus plastid |
8 | NC_015990 | TAGG | 4 | 53368 | 53383 | 16 | Panicum virgatum chloroplast |
9 | NC_016677 | TAGG | 4 | 52624 | 52639 | 16 | Leersia tisserantii plastid |
10 | NC_016699 | TAGG | 4 | 54166 | 54181 | 16 | Phyllostachys propinqua chloroplast |
11 | NC_016718 | TAGG | 4 | 52473 | 52488 | 16 | Rhynchoryza subulata plastid |
12 | NC_016927 | TAGG | 4 | 51284 | 51299 | 16 | Oryza meridionalis chloroplast |
13 | NC_017835 | TAGG | 4 | 51267 | 51282 | 16 | Oryza rufipogon chloroplast |
14 | NC_020341 | TAGG | 4 | 54142 | 54157 | 16 | Arundinaria gigantea chloroplast |
15 | NC_001320 | TAGG | 4 | 51286 | 51301 | 16 | Oryza sativa Japonica Group plastid |
16 | NC_001666 | TAGG | 4 | 54087 | 54102 | 16 | Zea mays chloroplast |
17 | NC_005878 | TAGG | 4 | 116261 | 116276 | 16 | Saccharum hybrid cultivar SP-80-3280 chloroplast |
18 | NC_005973 | TAGG | 4 | 51208 | 51223 | 16 | Oryza nivara chloroplast |
19 | NC_006084 | TAGG | 4 | 54634 | 54649 | 16 | Saccharum hybrid cultivar NCo 310 chloroplast |
20 | NC_008155 | TAGG | 4 | 51229 | 51244 | 16 | Oryza sativa Indica Group chloroplast |
21 | NC_008602 | TAGG | 4 | 54856 | 54871 | 16 | Sorghum bicolor chloroplast |
22 | NC_011032 | TAGG | 4 | 51482 | 51497 | 16 | Brachypodium distachyon chloroplast |
23 | NC_012927 | TAGG | 4 | 53828 | 53843 | 16 | Bambusa oldhamii chloroplast |
24 | NC_013088 | TAGG | 4 | 53946 | 53961 | 16 | Dendrocalamus latiflorus chloroplast |
25 | NC_013273 | TAGG | 4 | 54356 | 54371 | 16 | Coix lacryma-jobi chloroplast |
26 | NC_014675 | TAGG | 3 | 99248 | 99259 | 12 | Isoetes flaccida chloroplast |
27 | NC_015543 | TAGG | 3 | 14833 | 14843 | 11 | Jacobaea vulgaris chloroplast |
28 | NC_015830 | TAGG | 3 | 14852 | 14863 | 12 | Bambusa emeiensis chloroplast |
29 | NC_016733 | TAGG | 3 | 79603 | 79613 | 11 | Pedinomonas minor chloroplast |
30 | NC_019628 | TAGG | 3 | 33647 | 33657 | 11 | Pellia endiviifolia chloroplast |
31 | NC_019648 | TAGG | 3 | 14472 | 14483 | 12 | Festuca altissima plastid |
32 | NC_019649 | TAGG | 3 | 124995 | 125006 | 12 | Festuca ovina plastid |
33 | NC_019650 | TAGG | 3 | 14553 | 14564 | 12 | Festuca pratensis plastid |
34 | NC_019651 | TAGG | 3 | 14545 | 14556 | 12 | Lolium multiflorum plastid |
35 | NC_020321 | TAGG | 3 | 88133 | 88143 | 11 | Taxus mairei voucher NN014 chloroplast |
36 | NC_021109 | TAGG | 3 | 118940 | 118951 | 12 | Pleodorina starrii plastid |
37 | NC_021437 | TAGG | 3 | 65683 | 65694 | 12 | Cunninghamia lanceolata chloroplast |
38 | NC_001666 | TAGG | 3 | 14834 | 14845 | 12 | Zea mays chloroplast |
39 | NC_002693 | TAGG | 3 | 41608 | 41618 | 11 | Oenothera elata subsp. hookeri plastid plastome I |
40 | NC_005878 | TAGG | 3 | 76955 | 76966 | 12 | Saccharum hybrid cultivar SP-80-3280 chloroplast |
41 | NC_006084 | TAGG | 3 | 15328 | 15339 | 12 | Saccharum hybrid cultivar NCo 310 chloroplast |
42 | NC_008602 | TAGG | 3 | 15714 | 15725 | 12 | Sorghum bicolor chloroplast |
43 | NC_009259 | TAGG | 3 | 38901 | 38911 | 11 | Phaseolus vulgaris chloroplast |
44 | NC_009950 | TAGG | 3 | 14583 | 14594 | 12 | Lolium perenne chloroplast |
45 | NC_010358 | TAGG | 3 | 41137 | 41147 | 11 | Oenothera argillicola chloroplast |
46 | NC_010360 | TAGG | 3 | 41450 | 41460 | 11 | Oenothera glazioviana chloroplast |
47 | NC_010361 | TAGG | 3 | 41539 | 41549 | 11 | Oenothera biennis chloroplast |
48 | NC_010362 | TAGG | 3 | 41412 | 41422 | 11 | Oenothera parviflora chloroplast |
49 | NC_010442 | TAGG | 3 | 77270 | 77280 | 11 | Trachelium caeruleum chloroplast |
50 | NC_011713 | TAGG | 3 | 14584 | 14595 | 12 | Festuca arundinacea chloroplast |
51 | NC_012099 | TAGG | 3 | 63022 | 63032 | 11 | Pyramimonas parkeae chloroplast |
52 | NC_012927 | TAGG | 3 | 14805 | 14816 | 12 | Bambusa oldhamii chloroplast |
53 | NC_013088 | TAGG | 3 | 14887 | 14898 | 12 | Dendrocalamus latiflorus chloroplast |
54 | NC_013273 | TAGG | 3 | 15306 | 15317 | 12 | Coix lacryma-jobi chloroplast |