Chloroplast Motifs - Imperfect TCGT Repeats
S.No | Sequence ID | Motif | Iterations | Start | End | Tract Length | Sequence Name |
---|---|---|---|---|---|---|---|
1 | NC_021440 | TCGT | 3 | 61950 | 61960 | 11 | Pinus taeda chloroplast |
2 | NC_004677 | TCGT | 3 | 60071 | 60081 | 11 | Pinus koraiensis chloroplast |
3 | NC_002762 | TCGT | 3 | 117001 | 117012 | 12 | Triticum aestivum chloroplast |
4 | NC_001666 | TCGT | 3 | 120609 | 120620 | 12 | Zea mays chloroplast |
5 | NC_001631 | TCGT | 3 | 61292 | 61302 | 11 | Pinus thunbergii chloroplast |
6 | NC_001320 | TCGT | 3 | 116839 | 116850 | 12 | Oryza sativa Japonica Group plastid |
7 | NC_021637 | TCGT | 3 | 87787 | 87797 | 11 | Phaeocystis globosa strain Pg-G(A) chloroplast |
8 | NC_005878 | TCGT | 3 | 41825 | 41836 | 12 | Saccharum hybrid cultivar SP-80-3280 chloroplast |
9 | NC_021439 | TCGT | 3 | 61236 | 61246 | 11 | Pinus massoniana chloroplast |
10 | NC_021372 | TCGT | 3 | 122223 | 122234 | 12 | Pharus latifolius chloroplast |
11 | NC_021111 | TCGT | 3 | 55146 | 55157 | 12 | Cistanche deserticola chloroplast |
12 | NC_020341 | TCGT | 3 | 120292 | 120303 | 12 | Arundinaria gigantea chloroplast |
13 | NC_019651 | TCGT | 3 | 116851 | 116862 | 12 | Lolium multiflorum plastid |
14 | NC_019650 | TCGT | 3 | 116965 | 116976 | 12 | Festuca pratensis plastid |
15 | NC_019649 | TCGT | 3 | 115036 | 115047 | 12 | Festuca ovina plastid |
16 | NC_019648 | TCGT | 3 | 116956 | 116967 | 12 | Festuca altissima plastid |
17 | NC_011154 | TCGT | 3 | 60765 | 60775 | 11 | Pinus gerardiana chloroplast |
18 | NC_013273 | TCGT | 3 | 120986 | 120997 | 12 | Coix lacryma-jobi chloroplast |
19 | NC_013088 | TCGT | 3 | 120792 | 120803 | 12 | Dendrocalamus latiflorus chloroplast |
20 | NC_012927 | TCGT | 3 | 120715 | 120726 | 12 | Bambusa oldhamii chloroplast |
21 | NC_011930 | TCGT | 3 | 100700 | 100710 | 11 | Keteleeria davidiana chloroplast |
22 | NC_011713 | TCGT | 3 | 117573 | 117584 | 12 | Festuca arundinacea chloroplast |
23 | NC_011159 | TCGT | 3 | 60577 | 60587 | 11 | Pinus nelsonii chloroplast |
24 | NC_011158 | TCGT | 3 | 60398 | 60408 | 11 | Pinus monophylla chloroplast |
25 | NC_011156 | TCGT | 3 | 60193 | 60203 | 11 | Pinus lambertiana chloroplast |
26 | NC_011155 | TCGT | 3 | 60668 | 60678 | 11 | Pinus krempfii chloroplast |
27 | NC_017835 | TCGT | 3 | 116860 | 116871 | 12 | Oryza rufipogon chloroplast |
28 | NC_011153 | TCGT | 3 | 61374 | 61384 | 11 | Pinus contorta chloroplast |
29 | NC_011032 | TCGT | 3 | 116783 | 116794 | 12 | Brachypodium distachyon chloroplast |
30 | NC_009950 | TCGT | 3 | 116934 | 116945 | 12 | Lolium perenne chloroplast |
31 | NC_008602 | TCGT | 3 | 121472 | 121483 | 12 | Sorghum bicolor chloroplast |
32 | NC_008591 | TCGT | 3 | 118591 | 118602 | 12 | Agrostis stolonifera chloroplast |
33 | NC_008590 | TCGT | 3 | 118602 | 118613 | 12 | Hordeum vulgare subsp. vulgare chloroplast |
34 | NC_008155 | TCGT | 3 | 116815 | 116826 | 12 | Oryza sativa Indica Group chloroplast |
35 | NC_006084 | TCGT | 3 | 121382 | 121393 | 12 | Saccharum hybrid cultivar NCo 310 chloroplast |
36 | NC_005973 | TCGT | 3 | 116809 | 116820 | 12 | Oryza nivara chloroplast |
37 | NC_015826 | TCGT | 3 | 121131 | 121142 | 12 | Phyllostachys nigra var. henonis chloroplast |
38 | NC_015820 | TCGT | 3 | 121057 | 121068 | 12 | Acidosasa purpurea chloroplast |
39 | NC_015817 | TCGT | 3 | 121036 | 121047 | 12 | Phyllostachys edulis chloroplast |
40 | NC_015803 | TCGT | 3 | 121031 | 121042 | 12 | Indocalamus longiauritus plastid |
41 | NC_015610 | TCGT | 3 | 72474 | 72484 | 11 | Nelumbo nucifera chloroplast |
42 | NC_015605 | TCGT | 3 | 72432 | 72442 | 11 | Nelumbo lutea chloroplast |
43 | NC_015083 | TCGT | 3 | 69879 | 69890 | 12 | Erodium carvifolium chloroplast |
44 | NC_014575 | TCGT | 3 | 10644 | 10654 | 11 | Cedrus deodara chloroplast |
45 | NC_015830 | TCGT | 3 | 120847 | 120858 | 12 | Bambusa emeiensis chloroplast |
46 | NC_016927 | TCGT | 3 | 116872 | 116883 | 12 | Oryza meridionalis chloroplast |
47 | NC_016718 | TCGT | 3 | 118569 | 118580 | 12 | Rhynchoryza subulata plastid |
48 | NC_016699 | TCGT | 3 | 121059 | 121070 | 12 | Phyllostachys propinqua chloroplast |
49 | NC_016677 | TCGT | 3 | 118806 | 118817 | 12 | Leersia tisserantii plastid |
50 | NC_016064 | TCGT | 3 | 62551 | 62561 | 11 | Pseudotsuga sinensis var. wilsoniana chloroplast |
51 | NC_016058 | TCGT | 3 | 30437 | 30447 | 11 | Larix decidua chloroplast |
52 | NC_015990 | TCGT | 3 | 119870 | 119881 | 12 | Panicum virgatum chloroplast |
53 | NC_015831 | TCGT | 3 | 120793 | 120804 | 12 | Ferrocalamus rimosivaginus plastid |