ChloroMitoSSRDB 2.0 Webserver cum Database of Cholorplast and Mitochondrial Microsatellites

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Chloroplast Motifs - Imperfect TCGT Repeats

S.NoSequence IDMotifIterationsStartEndTract LengthSequence Name
1NC_021440TCGT3619506196011Pinus taeda chloroplast
2NC_004677TCGT3600716008111 Pinus koraiensis chloroplast
3NC_002762TCGT311700111701212 Triticum aestivum chloroplast
4NC_001666TCGT312060912062012 Zea mays chloroplast
5NC_001631TCGT3612926130211 Pinus thunbergii chloroplast
6NC_001320TCGT311683911685012 Oryza sativa Japonica Group plastid
7NC_021637TCGT3877878779711Phaeocystis globosa strain Pg-G(A) chloroplast
8NC_005878TCGT3418254183612 Saccharum hybrid cultivar SP-80-3280 chloroplast
9NC_021439TCGT3612366124611Pinus massoniana chloroplast
10NC_021372TCGT312222312223412Pharus latifolius chloroplast
11NC_021111TCGT3551465515712Cistanche deserticola chloroplast
12NC_020341TCGT312029212030312Arundinaria gigantea chloroplast
13NC_019651TCGT311685111686212Lolium multiflorum plastid
14NC_019650TCGT311696511697612Festuca pratensis plastid
15NC_019649TCGT311503611504712Festuca ovina plastid
16NC_019648TCGT311695611696712Festuca altissima plastid
17NC_011154TCGT3607656077511 Pinus gerardiana chloroplast
18NC_013273TCGT312098612099712 Coix lacryma-jobi chloroplast
19NC_013088TCGT312079212080312 Dendrocalamus latiflorus chloroplast
20NC_012927TCGT312071512072612 Bambusa oldhamii chloroplast
21NC_011930TCGT310070010071011 Keteleeria davidiana chloroplast
22NC_011713TCGT311757311758412 Festuca arundinacea chloroplast
23NC_011159TCGT3605776058711 Pinus nelsonii chloroplast
24NC_011158TCGT3603986040811 Pinus monophylla chloroplast
25NC_011156TCGT3601936020311 Pinus lambertiana chloroplast
26NC_011155TCGT3606686067811 Pinus krempfii chloroplast
27NC_017835TCGT311686011687112Oryza rufipogon chloroplast
28NC_011153TCGT3613746138411 Pinus contorta chloroplast
29NC_011032TCGT311678311679412 Brachypodium distachyon chloroplast
30NC_009950TCGT311693411694512 Lolium perenne chloroplast
31NC_008602TCGT312147212148312 Sorghum bicolor chloroplast
32NC_008591TCGT311859111860212 Agrostis stolonifera chloroplast
33NC_008590TCGT311860211861312 Hordeum vulgare subsp. vulgare chloroplast
34NC_008155TCGT311681511682612 Oryza sativa Indica Group chloroplast
35NC_006084TCGT312138212139312 Saccharum hybrid cultivar NCo 310 chloroplast
36NC_005973TCGT311680911682012 Oryza nivara chloroplast
37NC_015826TCGT312113112114212Phyllostachys nigra var. henonis chloroplast
38NC_015820TCGT312105712106812Acidosasa purpurea chloroplast
39NC_015817TCGT312103612104712Phyllostachys edulis chloroplast
40NC_015803TCGT312103112104212Indocalamus longiauritus plastid
41NC_015610TCGT3724747248411Nelumbo nucifera chloroplast
42NC_015605TCGT3724327244211Nelumbo lutea chloroplast
43NC_015083TCGT3698796989012Erodium carvifolium chloroplast
44NC_014575TCGT3106441065411Cedrus deodara chloroplast
45NC_015830TCGT312084712085812Bambusa emeiensis chloroplast
46NC_016927TCGT311687211688312Oryza meridionalis chloroplast
47NC_016718TCGT311856911858012Rhynchoryza subulata plastid
48NC_016699TCGT312105912107012Phyllostachys propinqua chloroplast
49NC_016677TCGT311880611881712Leersia tisserantii plastid
50NC_016064TCGT3625516256111Pseudotsuga sinensis var. wilsoniana chloroplast
51NC_016058TCGT3304373044711Larix decidua chloroplast
52NC_015990TCGT311987011988112Panicum virgatum chloroplast
53NC_015831TCGT312079312080412Ferrocalamus rimosivaginus plastid