Chloroplast Motifs - Imperfect CAAAA Repeats
S.No | Sequence ID | Motif | Iterations | Start | End | Tract Length | Sequence Name |
---|---|---|---|---|---|---|---|
1 | NC_010433 | CAAAA | 4 | 13715 | 13734 | 20 | Manihot esculenta chloroplast |
2 | NC_010776 | CAAAA | 4 | 131699 | 131719 | 21 | Fagopyrum esculentum subsp. ancestrale chloroplast |
3 | NC_012052 | CAAAA | 4 | 101138 | 101156 | 19 | Syntrichia ruralis chloroplast |
4 | NC_014346 | CAAAA | 3 | 176983 | 176997 | 15 | Floydiella terrestris chloroplast |
5 | NC_014346 | CAAAA | 3 | 433939 | 433952 | 14 | Floydiella terrestris chloroplast |
6 | NC_014346 | CAAAA | 3 | 519962 | 519975 | 14 | Floydiella terrestris chloroplast |
7 | NC_015831 | CAAAA | 3 | 131233 | 131246 | 14 | Ferrocalamus rimosivaginus plastid |
8 | NC_016736 | CAAAA | 3 | 14532 | 14546 | 15 | Ricinus communis chloroplast |
9 | NC_018565 | CAAAA | 3 | 29743 | 29757 | 15 | Pachycladon enysii chloroplast |
10 | NC_019628 | CAAAA | 3 | 33280 | 33294 | 15 | Pellia endiviifolia chloroplast |
11 | NC_020795 | CAAAA | 3 | 112043 | 112056 | 14 | Chondrus crispus plastid complete genome |
12 | NC_021102 | CAAAA | 3 | 29342 | 29356 | 15 | Pachycladon cheesemanii chloroplast |
13 | NC_021109 | CAAAA | 3 | 212125 | 212138 | 14 | Pleodorina starrii plastid |
14 | NC_021437 | CAAAA | 3 | 74130 | 74143 | 14 | Cunninghamia lanceolata chloroplast |
15 | NC_021438 | CAAAA | 3 | 106096 | 106109 | 14 | Gnetum montanum chloroplast |
16 | NC_021449 | CAAAA | 3 | 35414 | 35428 | 15 | Utricularia gibba chloroplast |
17 | NC_001865 | CAAAA | 3 | 123621 | 123636 | 16 | Chlorella vulgaris chloroplast |
18 | NC_004543 | CAAAA | 3 | 66459 | 66472 | 14 | Anthoceros formosae chloroplast |
19 | NC_004799 | CAAAA | 3 | 3936 | 3949 | 14 | Cyanidioschyzon merolae strain 10D chloroplast |
20 | NC_005353 | CAAAA | 3 | 105803 | 105816 | 14 | Chlamydomonas reinhardtii chloroplast |
21 | NC_008099 | CAAAA | 3 | 19736 | 19749 | 14 | Oltmannsiellopsis viridis chloroplast |
22 | NC_008101 | CAAAA | 3 | 141624 | 141638 | 15 | Scenedesmus obliquus chloroplast |
23 | NC_008114 | CAAAA | 3 | 9152 | 9165 | 14 | Pseudendoclonium akinetum chloroplast |
24 | NC_008114 | CAAAA | 3 | 37523 | 37537 | 15 | Pseudendoclonium akinetum chloroplast |
25 | NC_008114 | CAAAA | 3 | 59396 | 59409 | 14 | Pseudendoclonium akinetum chloroplast |
26 | NC_008114 | CAAAA | 3 | 127848 | 127861 | 14 | Pseudendoclonium akinetum chloroplast |
27 | NC_008235 | CAAAA | 3 | 113103 | 113116 | 14 | Populus alba chloroplast |
28 | NC_008372 | CAAAA | 3 | 2266 | 2280 | 15 | Stigeoclonium helveticum chloroplast |
29 | NC_009143 | CAAAA | 3 | 113624 | 113637 | 14 | Populus trichocarpa chloroplast |
30 | NC_009270 | CAAAA | 3 | 69786 | 69800 | 15 | Capsella bursa-pastoris chloroplast |
31 | NC_010323 | CAAAA | 3 | 4642 | 4656 | 15 | Carica papaya chloroplast |
32 | NC_010654 | CAAAA | 3 | 72178 | 72192 | 15 | Welwitschia mirabilis chloroplast |
33 | NC_010654 | CAAAA | 3 | 110416 | 110429 | 14 | Welwitschia mirabilis chloroplast |
34 | NC_011031 | CAAAA | 3 | 123709 | 123722 | 14 | Oedogonium cardiacum chloroplast |
35 | NC_011942 | CAAAA | 3 | 48496 | 48509 | 14 | Gnetum parvifolium chloroplast |
36 | NC_011954 | CAAAA | 3 | 101379 | 101392 | 14 | Ephedra equisetina chloroplast |
37 | NC_012052 | CAAAA | 3 | 101315 | 101330 | 16 | Syntrichia ruralis chloroplast |
38 | NC_012615 | CAAAA | 3 | 47641 | 47654 | 14 | Megaleranthis saniculifolia chloroplast |
39 | NC_013703 | CAAAA | 3 | 60918 | 60932 | 15 | Cryptomonas paramecium plastid |