Chloroplast Motifs - Imperfect GTAA Repeats
S.No | Sequence ID | Motif | Iterations | Start | End | Tract Length | Sequence Name |
---|---|---|---|---|---|---|---|
1 | NC_011087 | GTAA | 3 | 478620 | 478631 | 12 | Paulinella chromatophora chromatophore |
2 | NC_014267 | GTAA | 3 | 76996 | 77007 | 12 | Kryptoperidinium foliaceum chloroplast |
3 | NC_014287 | GTAA | 3 | 68952 | 68963 | 12 | Durinskia baltica chloroplast |
4 | NC_014569 | GTAA | 3 | 66952 | 66963 | 12 | Erodium texanum plastid |
5 | NC_014570 | GTAA | 3 | 74547 | 74557 | 11 | Eucalyptus grandis chloroplast |
6 | NC_014674 | GTAA | 3 | 134468 | 134479 | 12 | Castanea mollissima chloroplast |
7 | NC_014674 | GTAA | 3 | 156949 | 156960 | 12 | Castanea mollissima chloroplast |
8 | NC_014676 | GTAA | 3 | 46921 | 46931 | 11 | Theobroma cacao chloroplast |
9 | NC_014808 | GTAA | 3 | 76889 | 76900 | 12 | Thalassiosira oceanica CCMP1005 chloroplast |
10 | NC_015083 | GTAA | 3 | 26836 | 26846 | 11 | Erodium carvifolium chloroplast |
11 | NC_015113 | GTAA | 3 | 10206 | 10217 | 12 | Anthriscus cerefolium chloroplast |
12 | NC_015139 | GTAA | 3 | 43645 | 43655 | 11 | Brassica rapa subsp. pekinensis chloroplast |
13 | NC_015204 | GTAA | 3 | 46868 | 46878 | 11 | Gossypium thurberi chloroplast |
14 | NC_015308 | GTAA | 3 | 47863 | 47873 | 11 | Hevea brasiliensis chloroplast |
15 | NC_015621 | GTAA | 3 | 43860 | 43870 | 11 | Ageratina adenophora chloroplast |
16 | NC_015645 | GTAA | 3 | 139321 | 139331 | 11 | Schizomeris leibleinii chloroplast |
17 | NC_015894 | GTAA | 3 | 78856 | 78867 | 12 | Wolffiella lingulata chloroplast |
18 | NC_016430 | GTAA | 3 | 11469 | 11480 | 12 | Eleutherococcus senticosus chloroplast |
19 | NC_016471 | GTAA | 3 | 17653 | 17663 | 11 | Neottia nidus-avis plastid |
20 | NC_016668 | GTAA | 3 | 46716 | 46726 | 11 | Gossypium raimondii chloroplast |
21 | NC_016670 | GTAA | 3 | 46968 | 46978 | 11 | Gossypium darwinii chloroplast |
22 | NC_016690 | GTAA | 3 | 46975 | 46985 | 11 | Gossypium tomentosum chloroplast |
23 | NC_016692 | GTAA | 3 | 46870 | 46880 | 11 | Gossypium herbaceum subsp. africanum chloroplast |
24 | NC_016711 | GTAA | 3 | 46925 | 46935 | 11 | Gossypium mustelinum chloroplast |
25 | NC_016712 | GTAA | 3 | 46830 | 46840 | 11 | Gossypium arboreum chloroplast |
26 | NC_016731 | GTAA | 3 | 67891 | 67902 | 12 | Synedra acus chloroplast |
27 | NC_016734 | GTAA | 3 | 43597 | 43607 | 11 | Brassica napus chloroplast |
28 | NC_016736 | GTAA | 3 | 48708 | 48718 | 11 | Ricinus communis chloroplast |
29 | NC_017609 | GTAA | 3 | 44580 | 44590 | 11 | Phalaenopsis equestris chloroplast |
30 | NC_017894 | GTAA | 3 | 46735 | 46745 | 11 | Gossypium gossypioides chloroplast |
31 | NC_018109 | GTAA | 3 | 46321 | 46331 | 11 | Gossypium incanum chloroplast |
32 | NC_018110 | GTAA | 3 | 46458 | 46468 | 11 | Gossypium somalense chloroplast |
33 | NC_018111 | GTAA | 3 | 46317 | 46327 | 11 | Gossypium capitis-viridis chloroplast |
34 | NC_018112 | GTAA | 3 | 46482 | 46492 | 11 | Gossypium areysianum chloroplast |
35 | NC_018113 | GTAA | 3 | 46528 | 46538 | 11 | Gossypium robinsonii chloroplast |
36 | NC_018523 | GTAA | 3 | 32304 | 32315 | 12 | Saccharina japonica chloroplast |
37 | NC_018565 | GTAA | 3 | 44314 | 44324 | 11 | Pachycladon enysii chloroplast |
38 | NC_020014 | GTAA | 3 | 60127 | 60139 | 13 | Nannochloropsis gaditana chloroplast |
39 | NC_020147 | GTAA | 3 | 15164 | 15174 | 11 | Ophioglossum californicum chloroplast |
40 | NC_020152 | GTAA | 3 | 157440 | 157451 | 12 | Quercus rubra plastid |
41 | NC_020795 | GTAA | 3 | 14535 | 14545 | 11 | Chondrus crispus plastid complete genome |
42 | NC_021102 | GTAA | 3 | 43860 | 43870 | 11 | Pachycladon cheesemanii chloroplast |
43 | NC_021109 | GTAA | 3 | 26934 | 26944 | 11 | Pleodorina starrii plastid |
44 | NC_021109 | GTAA | 3 | 58490 | 58500 | 11 | Pleodorina starrii plastid |
45 | NC_021372 | GTAA | 3 | 46158 | 46168 | 11 | Pharus latifolius chloroplast |
46 | NC_021423 | GTAA | 3 | 48004 | 48014 | 11 | Catharanthus roseus cultivar Pacifica Punch Halo chloroplast |
47 | NC_021438 | GTAA | 3 | 113722 | 113734 | 13 | Gnetum montanum chloroplast |
48 | NC_000927 | GTAA | 3 | 43028 | 43039 | 12 | Nephroselmis olivacea chloroplast |
49 | NC_000932 | GTAA | 3 | 44475 | 44485 | 11 | Arabidopsis thaliana chloroplast |
50 | NC_001603 | GTAA | 3 | 81302 | 81312 | 11 | Euglena gracilis chloroplast |
51 | NC_001840 | GTAA | 3 | 58872 | 58882 | 11 | Cyanidium caldarium chloroplast |
52 | NC_002202 | GTAA | 3 | 43075 | 43085 | 11 | Spinacia oleracea plastid |
53 | NC_002694 | GTAA | 3 | 115005 | 115016 | 12 | Lotus japonicus chloroplast |
54 | NC_004543 | GTAA | 3 | 145658 | 145669 | 12 | Anthoceros formosae chloroplast |
55 | NC_004766 | GTAA | 3 | 28283 | 28294 | 12 | Adiantum capillus-veneris chloroplast |
56 | NC_004766 | GTAA | 3 | 75529 | 75539 | 11 | Adiantum capillus-veneris chloroplast |
57 | NC_005087 | GTAA | 3 | 53105 | 53115 | 11 | Physcomitrella patens subsp. patens chloroplast |
58 | NC_006050 | GTAA | 3 | 72307 | 72319 | 13 | Nymphaea alba chloroplast |
59 | NC_006137 | GTAA | 3 | 100481 | 100492 | 12 | Gracilaria tenuistipitata var. liui chloroplast |
60 | NC_006290 | GTAA | 3 | 11488 | 11499 | 12 | Panax ginseng chloroplast |
61 | NC_007407 | GTAA | 3 | 44757 | 44767 | 11 | Acorus calamus plastid |
62 | NC_007407 | GTAA | 3 | 150291 | 150302 | 12 | Acorus calamus plastid |
63 | NC_007499 | GTAA | 3 | 44428 | 44438 | 11 | Phalaenopsis aphrodite subsp. formosana chloroplast |
64 | NC_007758 | GTAA | 3 | 20236 | 20247 | 12 | Theileria parva strain Muguga apicoplast |
65 | NC_007898 | GTAA | 3 | 14768 | 14780 | 13 | Solanum lycopersicum chloroplast |
66 | NC_007932 | GTAA | 3 | 129251 | 129261 | 11 | Porphyra yezoensis chloroplast |
67 | NC_007943 | GTAA | 3 | 14795 | 14807 | 13 | Solanum bulbocastanum chloroplast |
68 | NC_007944 | GTAA | 3 | 46893 | 46903 | 11 | Gossypium hirsutum chloroplast |
69 | NC_008096 | GTAA | 3 | 14910 | 14922 | 13 | Solanum tuberosum chloroplast |
70 | NC_008099 | GTAA | 3 | 37580 | 37590 | 11 | Oltmannsiellopsis viridis chloroplast |
71 | NC_008114 | GTAA | 3 | 93722 | 93733 | 12 | Pseudendoclonium akinetum chloroplast |
72 | NC_008115 | GTAA | 3 | 74639 | 74649 | 11 | Eucalyptus globulus subsp. globulus chloroplast |
73 | NC_008235 | GTAA | 3 | 44253 | 44263 | 11 | Populus alba chloroplast |
74 | NC_008325 | GTAA | 3 | 10258 | 10269 | 12 | Daucus carota chloroplast |
75 | NC_008454 | GTAA | 3 | 12178 | 12188 | 11 | Pelargonium x hortorum chloroplast |
76 | NC_008589 | GTAA | 3 | 71550 | 71561 | 12 | Thalassiosira pseudonana chloroplast |
77 | NC_008641 | GTAA | 3 | 46944 | 46954 | 11 | Gossypium barbadense chloroplast |
78 | NC_008829 | GTAA | 3 | 51479 | 51489 | 11 | Angiopteris evecta chloroplast |
79 | NC_009143 | GTAA | 3 | 44601 | 44611 | 11 | Populus trichocarpa chloroplast |
80 | NC_009265 | GTAA | 3 | 43889 | 43899 | 11 | Aethionema cordifolium chloroplast |
81 | NC_009266 | GTAA | 3 | 43924 | 43934 | 11 | Aethionema grandiflorum chloroplast |
82 | NC_009267 | GTAA | 3 | 44099 | 44109 | 11 | Olimarabidopsis pumila chloroplast |
83 | NC_009268 | GTAA | 3 | 43702 | 43712 | 11 | Arabis hirsuta chloroplast |
84 | NC_009269 | GTAA | 3 | 44314 | 44324 | 11 | Barbarea verna chloroplast |
85 | NC_009270 | GTAA | 3 | 43887 | 43897 | 11 | Capsella bursa-pastoris chloroplast |
86 | NC_009271 | GTAA | 3 | 44066 | 44076 | 11 | Crucihimalaya wallichii chloroplast |
87 | NC_009272 | GTAA | 3 | 43455 | 43465 | 11 | Draba nemorosa chloroplast |
88 | NC_009273 | GTAA | 3 | 44132 | 44142 | 11 | Lepidium virginicum chloroplast |
89 | NC_009274 | GTAA | 3 | 43027 | 43037 | 11 | Lobularia maritima chloroplast |
90 | NC_009275 | GTAA | 3 | 44136 | 44146 | 11 | Nasturtium officinale chloroplast |
91 | NC_009573 | GTAA | 3 | 25098 | 25109 | 12 | Rhodomonas salina chloroplast |
92 | NC_009601 | GTAA | 3 | 43917 | 43927 | 11 | Dioscorea elephantipes chloroplast |
93 | NC_009681 | GTAA | 3 | 96809 | 96821 | 13 | Leptosira terrestris chloroplast |
94 | NC_010093 | GTAA | 3 | 44437 | 44447 | 11 | Acorus americanus chloroplast |
95 | NC_010093 | GTAA | 3 | 149961 | 149972 | 12 | Acorus americanus chloroplast |
96 | NC_010360 | GTAA | 3 | 70649 | 70659 | 11 | Oenothera glazioviana chloroplast |
97 | NC_010433 | GTAA | 3 | 47081 | 47091 | 11 | Manihot esculenta chloroplast |
98 | NC_010776 | GTAA | 3 | 103601 | 103611 | 11 | Fagopyrum esculentum subsp. ancestrale chloroplast |
99 | NC_011942 | GTAA | 3 | 56122 | 56134 | 13 | Gnetum parvifolium chloroplast |
100 | NC_012097 | GTAA | 3 | 11767 | 11777 | 11 | Pycnococcus provasolii chloroplast |
101 | NC_012097 | GTAA | 3 | 14071 | 14083 | 13 | Pycnococcus provasolii chloroplast |
102 | NC_012097 | GTAA | 3 | 22348 | 22359 | 12 | Pycnococcus provasolii chloroplast |
103 | NC_012224 | GTAA | 3 | 49433 | 49443 | 11 | Jatropha curcas chloroplast |
104 | NC_012575 | GTAA | 3 | 46957 | 46968 | 12 | Micromonas sp. RCC299 chloroplast |
105 | NC_012575 | GTAA | 3 | 68063 | 68074 | 12 | Micromonas sp. RCC299 chloroplast |
106 | NC_012818 | GTAA | 3 | 144249 | 144260 | 12 | Alsophila spinulosa chloroplast |