ChloroMitoSSRDB 2.0 Webserver cum Database of Cholorplast and Mitochondrial Microsatellites

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Chloroplast Motifs - Imperfect GTAA Repeats

S.NoSequence IDMotifIterationsStartEndTract LengthSequence Name
1NC_011087GTAA347862047863112Paulinella chromatophora chromatophore
2NC_014267GTAA3769967700712Kryptoperidinium foliaceum chloroplast
3NC_014287GTAA3689526896312Durinskia baltica chloroplast
4NC_014569GTAA3669526696312Erodium texanum plastid
5NC_014570GTAA3745477455711Eucalyptus grandis chloroplast
6NC_014674GTAA313446813447912Castanea mollissima chloroplast
7NC_014674GTAA315694915696012Castanea mollissima chloroplast
8NC_014676GTAA3469214693111Theobroma cacao chloroplast
9NC_014808GTAA3768897690012Thalassiosira oceanica CCMP1005 chloroplast
10NC_015083GTAA3268362684611Erodium carvifolium chloroplast
11NC_015113GTAA3102061021712Anthriscus cerefolium chloroplast
12NC_015139GTAA3436454365511Brassica rapa subsp. pekinensis chloroplast
13NC_015204GTAA3468684687811Gossypium thurberi chloroplast
14NC_015308GTAA3478634787311Hevea brasiliensis chloroplast
15NC_015621GTAA3438604387011Ageratina adenophora chloroplast
16NC_015645GTAA313932113933111Schizomeris leibleinii chloroplast
17NC_015894GTAA3788567886712Wolffiella lingulata chloroplast
18NC_016430GTAA3114691148012Eleutherococcus senticosus chloroplast
19NC_016471GTAA3176531766311Neottia nidus-avis plastid
20NC_016668GTAA3467164672611Gossypium raimondii chloroplast
21NC_016670GTAA3469684697811Gossypium darwinii chloroplast
22NC_016690GTAA3469754698511Gossypium tomentosum chloroplast
23NC_016692GTAA3468704688011Gossypium herbaceum subsp. africanum chloroplast
24NC_016711GTAA3469254693511Gossypium mustelinum chloroplast
25NC_016712GTAA3468304684011Gossypium arboreum chloroplast
26NC_016731GTAA3678916790212Synedra acus chloroplast
27NC_016734GTAA3435974360711Brassica napus chloroplast
28NC_016736GTAA3487084871811Ricinus communis chloroplast
29NC_017609GTAA3445804459011Phalaenopsis equestris chloroplast
30NC_017894GTAA3467354674511Gossypium gossypioides chloroplast
31NC_018109GTAA3463214633111Gossypium incanum chloroplast
32NC_018110GTAA3464584646811Gossypium somalense chloroplast
33NC_018111GTAA3463174632711Gossypium capitis-viridis chloroplast
34NC_018112GTAA3464824649211Gossypium areysianum chloroplast
35NC_018113GTAA3465284653811Gossypium robinsonii chloroplast
36NC_018523GTAA3323043231512Saccharina japonica chloroplast
37NC_018565GTAA3443144432411Pachycladon enysii chloroplast
38NC_020014GTAA3601276013913Nannochloropsis gaditana chloroplast
39NC_020147GTAA3151641517411Ophioglossum californicum chloroplast
40NC_020152GTAA315744015745112Quercus rubra plastid
41NC_020795GTAA3145351454511Chondrus crispus plastid complete genome
42NC_021102GTAA3438604387011Pachycladon cheesemanii chloroplast
43NC_021109GTAA3269342694411Pleodorina starrii plastid
44NC_021109GTAA3584905850011Pleodorina starrii plastid
45NC_021372GTAA3461584616811Pharus latifolius chloroplast
46NC_021423GTAA3480044801411Catharanthus roseus cultivar Pacifica Punch Halo chloroplast
47NC_021438GTAA311372211373413Gnetum montanum chloroplast
48NC_000927GTAA3430284303912 Nephroselmis olivacea chloroplast
49NC_000932GTAA3444754448511 Arabidopsis thaliana chloroplast
50NC_001603GTAA3813028131211 Euglena gracilis chloroplast
51NC_001840GTAA3588725888211 Cyanidium caldarium chloroplast
52NC_002202GTAA3430754308511 Spinacia oleracea plastid
53NC_002694GTAA311500511501612 Lotus japonicus chloroplast
54NC_004543GTAA314565814566912 Anthoceros formosae chloroplast
55NC_004766GTAA3282832829412 Adiantum capillus-veneris chloroplast
56NC_004766GTAA3755297553911 Adiantum capillus-veneris chloroplast
57NC_005087GTAA3531055311511 Physcomitrella patens subsp. patens chloroplast
58NC_006050GTAA3723077231913 Nymphaea alba chloroplast
59NC_006137GTAA310048110049212 Gracilaria tenuistipitata var. liui chloroplast
60NC_006290GTAA3114881149912 Panax ginseng chloroplast
61NC_007407GTAA3447574476711 Acorus calamus plastid
62NC_007407GTAA315029115030212 Acorus calamus plastid
63NC_007499GTAA3444284443811 Phalaenopsis aphrodite subsp. formosana chloroplast
64NC_007758GTAA3202362024712 Theileria parva strain Muguga apicoplast
65NC_007898GTAA3147681478013 Solanum lycopersicum chloroplast
66NC_007932GTAA312925112926111 Porphyra yezoensis chloroplast
67NC_007943GTAA3147951480713 Solanum bulbocastanum chloroplast
68NC_007944GTAA3468934690311 Gossypium hirsutum chloroplast
69NC_008096GTAA3149101492213 Solanum tuberosum chloroplast
70NC_008099GTAA3375803759011 Oltmannsiellopsis viridis chloroplast
71NC_008114GTAA3937229373312 Pseudendoclonium akinetum chloroplast
72NC_008115GTAA3746397464911 Eucalyptus globulus subsp. globulus chloroplast
73NC_008235GTAA3442534426311 Populus alba chloroplast
74NC_008325GTAA3102581026912 Daucus carota chloroplast
75NC_008454GTAA3121781218811 Pelargonium x hortorum chloroplast
76NC_008589GTAA3715507156112 Thalassiosira pseudonana chloroplast
77NC_008641GTAA3469444695411 Gossypium barbadense chloroplast
78NC_008829GTAA3514795148911 Angiopteris evecta chloroplast
79NC_009143GTAA3446014461111 Populus trichocarpa chloroplast
80NC_009265GTAA3438894389911 Aethionema cordifolium chloroplast
81NC_009266GTAA3439244393411 Aethionema grandiflorum chloroplast
82NC_009267GTAA3440994410911 Olimarabidopsis pumila chloroplast
83NC_009268GTAA3437024371211 Arabis hirsuta chloroplast
84NC_009269GTAA3443144432411 Barbarea verna chloroplast
85NC_009270GTAA3438874389711 Capsella bursa-pastoris chloroplast
86NC_009271GTAA3440664407611 Crucihimalaya wallichii chloroplast
87NC_009272GTAA3434554346511 Draba nemorosa chloroplast
88NC_009273GTAA3441324414211 Lepidium virginicum chloroplast
89NC_009274GTAA3430274303711 Lobularia maritima chloroplast
90NC_009275GTAA3441364414611 Nasturtium officinale chloroplast
91NC_009573GTAA3250982510912 Rhodomonas salina chloroplast
92NC_009601GTAA3439174392711 Dioscorea elephantipes chloroplast
93NC_009681GTAA3968099682113 Leptosira terrestris chloroplast
94NC_010093GTAA3444374444711 Acorus americanus chloroplast
95NC_010093GTAA314996114997212 Acorus americanus chloroplast
96NC_010360GTAA3706497065911 Oenothera glazioviana chloroplast
97NC_010433GTAA3470814709111 Manihot esculenta chloroplast
98NC_010776GTAA310360110361111 Fagopyrum esculentum subsp. ancestrale chloroplast
99NC_011942GTAA3561225613413 Gnetum parvifolium chloroplast
100NC_012097GTAA3117671177711 Pycnococcus provasolii chloroplast
101NC_012097GTAA3140711408313 Pycnococcus provasolii chloroplast
102NC_012097GTAA3223482235912 Pycnococcus provasolii chloroplast
103NC_012224GTAA3494334944311 Jatropha curcas chloroplast
104NC_012575GTAA3469574696812 Micromonas sp. RCC299 chloroplast
105NC_012575GTAA3680636807412 Micromonas sp. RCC299 chloroplast
106NC_012818GTAA314424914426012 Alsophila spinulosa chloroplast