Chloroplast Motifs - Imperfect C Repeats
| S.No | Sequence ID | Motif | Iterations | Start | End | Tract Length | Sequence Name |
| 1 | NC_021109 | C | 32 | 187753 | 187784 | 32 | Pleodorina starrii plastid |
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| 2 | NC_020362 | C | 24 | 40679 | 40702 | 24 | Heliconia collinsiana plastid |
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| 3 | NC_008099 | C | 23 | 20268 | 20290 | 23 | Oltmannsiellopsis viridis chloroplast |
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| 4 | NC_009618 | C | 19 | 87881 | 87899 | 19 | Cycas taitungensis chloroplast |
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| 5 | NC_012818 | C | 19 | 69754 | 69772 | 19 | Alsophila spinulosa chloroplast |
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| 6 | NC_010433 | C | 18 | 63211 | 63228 | 18 | Manihot esculenta chloroplast |
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| 7 | NC_019628 | C | 17 | 97093 | 97109 | 17 | Pellia endiviifolia chloroplast |
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| 8 | NC_008457 | C | 17 | 9314 | 9330 | 17 | Piper cenocladum chloroplast |
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| 9 | NC_014592 | C | 16 | 58508 | 58523 | 16 | Cheilanthes lindheimeri chloroplast |
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| 10 | NC_014592 | C | 16 | 133201 | 133216 | 16 | Cheilanthes lindheimeri chloroplast |
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| 11 | NC_018112 | C | 16 | 36863 | 36878 | 16 | Gossypium areysianum chloroplast |
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| 12 | NC_004766 | C | 16 | 13649 | 13664 | 16 | Adiantum capillus-veneris chloroplast |
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| 13 | NC_004766 | C | 16 | 61706 | 61721 | 16 | Adiantum capillus-veneris chloroplast |
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| 14 | NC_004766 | C | 16 | 93614 | 93629 | 16 | Adiantum capillus-veneris chloroplast |
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| 15 | NC_009266 | C | 16 | 70376 | 70391 | 16 | Aethionema grandiflorum chloroplast |
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| 16 | NC_009618 | C | 16 | 49203 | 49218 | 16 | Cycas taitungensis chloroplast |
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| 17 | NC_009963 | C | 16 | 52164 | 52179 | 16 | Cuscuta exaltata chloroplast |
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| 18 | NC_010358 | C | 16 | 18029 | 18044 | 16 | Oenothera argillicola chloroplast |
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| 19 | NC_010359 | C | 16 | 20849 | 20864 | 16 | Aneura mirabilis chloroplast |
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| 20 | NC_012818 | C | 16 | 129616 | 129631 | 16 | Alsophila spinulosa chloroplast |
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| 21 | NC_014592 | C | 15 | 63248 | 63262 | 15 | Cheilanthes lindheimeri chloroplast |
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| 22 | NC_022136 | C | 15 | 110366 | 110380 | 15 | Lygodium japonicum chloroplast |
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| 23 | NC_004766 | C | 15 | 127394 | 127408 | 15 | Adiantum capillus-veneris chloroplast |
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| 24 | NC_007602 | C | 15 | 82297 | 82311 | 15 | Nicotiana tomentosiformis chloroplast |
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| 25 | NC_008099 | C | 15 | 15478 | 15492 | 15 | Oltmannsiellopsis viridis chloroplast |
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| 26 | NC_008788 | C | 15 | 5193 | 5207 | 15 | Nuphar advena chloroplast |
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| 27 | NC_009267 | C | 15 | 64497 | 64511 | 15 | Olimarabidopsis pumila chloroplast |
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| 28 | NC_009950 | C | 15 | 47279 | 47293 | 15 | Lolium perenne chloroplast |
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| 29 | NC_010359 | C | 15 | 38762 | 38776 | 15 | Aneura mirabilis chloroplast |
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| 30 | NC_012818 | C | 15 | 8126 | 8140 | 15 | Alsophila spinulosa chloroplast |
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| 31 | NC_012818 | C | 15 | 45321 | 45335 | 15 | Alsophila spinulosa chloroplast |
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| 32 | NC_012818 | C | 15 | 132548 | 132562 | 15 | Alsophila spinulosa chloroplast |
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| 33 | NC_014569 | C | 14 | 93890 | 93903 | 14 | Erodium texanum plastid |
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| 34 | NC_014699 | C | 14 | 102928 | 102941 | 14 | Equisetum arvense chloroplast |
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| 35 | NC_015610 | C | 14 | 24774 | 24787 | 14 | Nelumbo nucifera chloroplast |
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| 36 | NC_016692 | C | 14 | 14674 | 14687 | 14 | Gossypium herbaceum subsp. africanum chloroplast |
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| 37 | NC_020366 | C | 14 | 59213 | 59226 | 14 | Bismarckia nobilis plastid |
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| 38 | NC_020438 | C | 14 | 201564 | 201577 | 14 | Gonium pectorale chloroplast |
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| 39 | NC_020607 | C | 14 | 5430 | 5443 | 14 | Artemisia frigida chloroplast |
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| 40 | NC_021102 | C | 14 | 66347 | 66360 | 14 | Pachycladon cheesemanii chloroplast |
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| 41 | NC_004766 | C | 14 | 34824 | 34837 | 14 | Adiantum capillus-veneris chloroplast |
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| 42 | NC_004766 | C | 14 | 104850 | 104863 | 14 | Adiantum capillus-veneris chloroplast |
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| 43 | NC_004766 | C | 14 | 127862 | 127875 | 14 | Adiantum capillus-veneris chloroplast |
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| 44 | NC_007944 | C | 14 | 14703 | 14716 | 14 | Gossypium hirsutum chloroplast |
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| 45 | NC_008326 | C | 14 | 7219 | 7232 | 14 | Liriodendron tulipifera chloroplast |
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| 46 | NC_009600 | C | 14 | 5908 | 5921 | 14 | Illicium oligandrum chloroplast |
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| 47 | NC_009618 | C | 14 | 17560 | 17573 | 14 | Cycas taitungensis chloroplast |
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| 48 | NC_014592 | C | 13 | 63783 | 63795 | 13 | Cheilanthes lindheimeri chloroplast |
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| 49 | NC_014674 | C | 13 | 24789 | 24801 | 13 | Castanea mollissima chloroplast |
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| 50 | NC_014697 | C | 13 | 60639 | 60651 | 13 | Prunus persica chloroplast |
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| 51 | NC_014699 | C | 13 | 101874 | 101886 | 13 | Equisetum arvense chloroplast |
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| 52 | NC_015204 | C | 13 | 14687 | 14699 | 13 | Gossypium thurberi chloroplast |
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| 53 | NC_015610 | C | 13 | 7795 | 7807 | 13 | Nelumbo nucifera chloroplast |
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| 54 | NC_016712 | C | 13 | 14675 | 14687 | 13 | Gossypium arboreum chloroplast |
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| 55 | NC_016736 | C | 13 | 40216 | 40228 | 13 | Ricinus communis chloroplast |
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| 56 | NC_018569 | C | 13 | 112552 | 112564 | 13 | Trebouxiophyceae sp. MX-AZ01 chloroplast |
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| 57 | NC_019650 | C | 13 | 14090 | 14102 | 13 | Festuca pratensis plastid |
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| 58 | NC_020152 | C | 13 | 24714 | 24726 | 13 | Quercus rubra plastid |
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| 59 | NC_020361 | C | 13 | 72121 | 72133 | 13 | Podocarpus totara chloroplast |
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| 60 | NC_020363 | C | 13 | 37959 | 37971 | 13 | Zingiber spectabile plastid |
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| 61 | NC_020366 | C | 13 | 5029 | 5041 | 13 | Bismarckia nobilis plastid |
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| 62 | NC_021109 | C | 13 | 191077 | 191089 | 13 | Pleodorina starrii plastid |
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| 63 | NC_021646 | C | 13 | 9516 | 9528 | 13 | Glycine stenophita voucher CSIRO:G1974 chloroplast |
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| 64 | NC_022136 | C | 13 | 132392 | 132404 | 13 | Lygodium japonicum chloroplast |
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| 65 | NC_006050 | C | 13 | 39698 | 39710 | 13 | Nymphaea alba chloroplast |
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| 66 | NC_008334 | C | 13 | 104854 | 104866 | 13 | Citrus sinensis chloroplast |
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| 67 | NC_008454 | C | 13 | 153270 | 153282 | 13 | Pelargonium x hortorum chloroplast |
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| 68 | NC_008457 | C | 13 | 5540 | 5552 | 13 | Piper cenocladum chloroplast |
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| 69 | NC_008602 | C | 13 | 21443 | 21455 | 13 | Sorghum bicolor chloroplast |
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| 70 | NC_009268 | C | 13 | 61755 | 61767 | 13 | Arabis hirsuta chloroplast |
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| 71 | NC_009268 | C | 13 | 65663 | 65675 | 13 | Arabis hirsuta chloroplast |
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| 72 | NC_009599 | C | 13 | 120789 | 120801 | 13 | Buxus microphylla chloroplast |
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| 73 | NC_009950 | C | 13 | 14120 | 14132 | 13 | Lolium perenne chloroplast |
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| 74 | NC_009962 | C | 13 | 84863 | 84875 | 13 | Ceratophyllum demersum chloroplast |
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| 75 | NC_010359 | C | 13 | 28921 | 28933 | 13 | Aneura mirabilis chloroplast |
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| 76 | NC_010359 | C | 13 | 59608 | 59620 | 13 | Aneura mirabilis chloroplast |
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| 77 | NC_010433 | C | 13 | 53498 | 53510 | 13 | Manihot esculenta chloroplast |
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| 78 | NC_010433 | C | 13 | 140995 | 141007 | 13 | Manihot esculenta chloroplast |
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| 79 | NC_011156 | C | 13 | 15100 | 15112 | 13 | Pinus lambertiana chloroplast |
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| 80 | NC_011942 | C | 13 | 66911 | 66923 | 13 | Gnetum parvifolium chloroplast |
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| 81 | NC_011942 | C | 13 | 86140 | 86152 | 13 | Gnetum parvifolium chloroplast |
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| 82 | NC_012818 | C | 13 | 9680 | 9692 | 13 | Alsophila spinulosa chloroplast |
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| 83 | NC_012818 | C | 13 | 62525 | 62537 | 13 | Alsophila spinulosa chloroplast |
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| 84 | NC_012818 | C | 13 | 70488 | 70500 | 13 | Alsophila spinulosa chloroplast |
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| 85 | NC_013991 | C | 13 | 58958 | 58970 | 13 | Phoenix dactylifera chloroplast |
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| 86 | NC_014348 | C | 12 | 22243 | 22254 | 12 | Pteridium aquilinum subsp. aquilinum chloroplast |
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| 87 | NC_014582 | C | 12 | 114713 | 114724 | 12 | Monsonia speciosa plastid |
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| 88 | NC_014589 | C | 12 | 27880 | 27891 | 12 | Cathaya argyrophylla chloroplast |
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| 89 | NC_014674 | C | 12 | 4392 | 4403 | 12 | Castanea mollissima chloroplast |
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| 90 | NC_014676 | C | 12 | 134237 | 134248 | 12 | Theobroma cacao chloroplast |
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| 91 | NC_015831 | C | 12 | 49786 | 49797 | 12 | Ferrocalamus rimosivaginus plastid |
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| 92 | NC_015891 | C | 12 | 5407 | 5418 | 12 | Spirodela polyrhiza chloroplast |
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| 93 | NC_016069 | C | 12 | 56679 | 56690 | 12 | Picea morrisonicola chloroplast |
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| 94 | NC_016430 | C | 12 | 5457 | 5468 | 12 | Eleutherococcus senticosus chloroplast |
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| 95 | NC_016430 | C | 12 | 137427 | 137438 | 12 | Eleutherococcus senticosus chloroplast |
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| 96 | NC_016668 | C | 12 | 14632 | 14643 | 12 | Gossypium raimondii chloroplast |
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| 97 | NC_016670 | C | 12 | 14722 | 14733 | 12 | Gossypium darwinii chloroplast |
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| 98 | NC_016690 | C | 12 | 14720 | 14731 | 12 | Gossypium tomentosum chloroplast |
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| 99 | NC_016711 | C | 12 | 71315 | 71326 | 12 | Gossypium mustelinum chloroplast |
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| 100 | NC_016736 | C | 12 | 4697 | 4708 | 12 | Ricinus communis chloroplast |
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| 101 | NC_016736 | C | 12 | 45777 | 45788 | 12 | Ricinus communis chloroplast |
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| 102 | NC_016736 | C | 12 | 69640 | 69651 | 12 | Ricinus communis chloroplast |
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| 103 | NC_020098 | C | 12 | 5222 | 5233 | 12 | Tectona grandis chloroplast |
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| 104 | NC_020152 | C | 12 | 70817 | 70828 | 12 | Quercus rubra plastid |
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| 105 | NC_020364 | C | 12 | 4789 | 4800 | 12 | Pseudophoenix vinifera plastid |
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| 106 | NC_021645 | C | 12 | 9534 | 9545 | 12 | Glycine cyrtoloba voucher CSIRO:G1267 chloroplast |
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| 107 | NC_021648 | C | 12 | 9634 | 9645 | 12 | Glycine dolichocarpa voucher CSIRO:G1134 chloroplast |
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| 108 | NC_021650 | C | 12 | 9635 | 9646 | 12 | Glycine syndetika voucher CSIRO:G1300 chloroplast |
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| 109 | NC_004677 | C | 12 | 15012 | 15023 | 12 | Pinus koraiensis chloroplast |
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| 110 | NC_004766 | C | 12 | 14753 | 14764 | 12 | Adiantum capillus-veneris chloroplast |
|---|
| 111 | NC_004766 | C | 12 | 51386 | 51397 | 12 | Adiantum capillus-veneris chloroplast |
|---|
| 112 | NC_004993 | C | 12 | 70435 | 70446 | 12 | Calycanthus floridus var. glaucus chloroplast |
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| 113 | NC_004993 | C | 12 | 110341 | 110352 | 12 | Calycanthus floridus var. glaucus chloroplast |
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| 114 | NC_006050 | C | 12 | 5545 | 5556 | 12 | Nymphaea alba chloroplast |
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| 115 | NC_006861 | C | 12 | 42657 | 42668 | 12 | Huperzia lucidula chloroplast |
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| 116 | NC_006861 | C | 12 | 100124 | 100135 | 12 | Huperzia lucidula chloroplast |
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| 117 | NC_008099 | C | 12 | 12283 | 12294 | 12 | Oltmannsiellopsis viridis chloroplast |
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| 118 | NC_008326 | C | 12 | 32527 | 32538 | 12 | Liriodendron tulipifera chloroplast |
|---|
| 119 | NC_008326 | C | 12 | 118567 | 118578 | 12 | Liriodendron tulipifera chloroplast |
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| 120 | NC_009269 | C | 12 | 14763 | 14774 | 12 | Barbarea verna chloroplast |
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| 121 | NC_009618 | C | 12 | 5105 | 5116 | 12 | Cycas taitungensis chloroplast |
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| 122 | NC_010323 | C | 12 | 150029 | 150040 | 12 | Carica papaya chloroplast |
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| 123 | NC_010358 | C | 12 | 4106 | 4117 | 12 | Oenothera argillicola chloroplast |
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| 124 | NC_010358 | C | 12 | 117739 | 117750 | 12 | Oenothera argillicola chloroplast |
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| 125 | NC_010360 | C | 12 | 18359 | 18370 | 12 | Oenothera glazioviana chloroplast |
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| 126 | NC_010362 | C | 12 | 18266 | 18277 | 12 | Oenothera parviflora chloroplast |
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| 127 | NC_010362 | C | 12 | 117785 | 117796 | 12 | Oenothera parviflora chloroplast |
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| 128 | NC_010433 | C | 12 | 4360 | 4371 | 12 | Manihot esculenta chloroplast |
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| 129 | NC_010776 | C | 12 | 150158 | 150169 | 12 | Fagopyrum esculentum subsp. ancestrale chloroplast |
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| 130 | NC_011159 | C | 12 | 21198 | 21209 | 12 | Pinus nelsonii chloroplast |
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| 131 | NC_012101 | C | 12 | 21903 | 21914 | 12 | Monomastix sp. OKE-1 chloroplast |
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| 132 | NC_012224 | C | 12 | 46404 | 46415 | 12 | Jatropha curcas chloroplast |
|---|
| 133 | NC_012818 | C | 12 | 14045 | 14056 | 12 | Alsophila spinulosa chloroplast |
|---|
| 134 | NC_012818 | C | 12 | 66640 | 66651 | 12 | Alsophila spinulosa chloroplast |
|---|