Chloroplast Motifs - Imperfect AGTA Repeats
S.No | Sequence ID | Motif | Iterations | Start | End | Tract Length | Sequence Name |
---|---|---|---|---|---|---|---|
1 | NC_014674 | AGTA | 3 | 70888 | 70898 | 11 | Castanea mollissima chloroplast |
2 | NC_015403 | AGTA | 3 | 30985 | 30996 | 12 | Fistulifera sp. JPCC DA0580 chloroplast |
3 | NC_015543 | AGTA | 3 | 65314 | 65324 | 11 | Jacobaea vulgaris chloroplast |
4 | NC_015645 | AGTA | 3 | 136751 | 136761 | 11 | Schizomeris leibleinii chloroplast |
5 | NC_015983 | AGTA | 3 | 113013 | 113024 | 12 | Cucumis melo subsp. melo chloroplast |
6 | NC_016703 | AGTA | 3 | 57993 | 58004 | 12 | Phaeocystis antarctica strain CCMP1374 plastid |
7 | NC_018114 | AGTA | 3 | 27633 | 27644 | 12 | Erycina pusilla chloroplast |
8 | NC_020152 | AGTA | 3 | 70866 | 70876 | 11 | Quercus rubra plastid |
9 | NC_020795 | AGTA | 3 | 164229 | 164240 | 12 | Chondrus crispus plastid complete genome |
10 | NC_021075 | AGTA | 3 | 48719 | 48730 | 12 | Calliarthron tuberculosum chloroplast |
11 | NC_021101 | AGTA | 3 | 66861 | 66871 | 11 | Francoa sonchifolia plastid |
12 | NC_021111 | AGTA | 3 | 51681 | 51691 | 11 | Cistanche deserticola chloroplast |
13 | NC_021429 | AGTA | 3 | 30861 | 30871 | 11 | Cymbidium aloifolium voucher KUN:YJB100604 chloroplast |
14 | NC_021431 | AGTA | 3 | 31006 | 31016 | 11 | Cymbidium tortisepalum voucher KUN:HJL091027 chloroplast |
15 | NC_021432 | AGTA | 3 | 30489 | 30499 | 11 | Cymbidium tracyanum voucher KUN:YJB100606 chloroplast |
16 | NC_021433 | AGTA | 3 | 30751 | 30761 | 11 | Cymbidium mannii voucher KUN:YJB100602 chloroplast |
17 | NC_000925 | AGTA | 3 | 10844 | 10856 | 13 | Porphyra purpurea chloroplast |
18 | NC_001568 | AGTA | 3 | 68060 | 68070 | 11 | Epifagus virginiana chloroplast |
19 | NC_001840 | AGTA | 3 | 71077 | 71087 | 11 | Cyanidium caldarium chloroplast |
20 | NC_001840 | AGTA | 3 | 117421 | 117432 | 12 | Cyanidium caldarium chloroplast |
21 | NC_005086 | AGTA | 3 | 18881 | 18891 | 11 | Amborella trichopoda chloroplast |
22 | NC_005087 | AGTA | 3 | 823 | 834 | 12 | Physcomitrella patens subsp. patens chloroplast |
23 | NC_005353 | AGTA | 3 | 36793 | 36804 | 12 | Chlamydomonas reinhardtii chloroplast |
24 | NC_007144 | AGTA | 3 | 112728 | 112739 | 12 | Cucumis sativus chloroplast |
25 | NC_007932 | AGTA | 3 | 118526 | 118536 | 11 | Porphyra yezoensis chloroplast |
26 | NC_008097 | AGTA | 3 | 17453 | 17463 | 11 | Chara vulgaris chloroplast |
27 | NC_008101 | AGTA | 3 | 57369 | 57380 | 12 | Scenedesmus obliquus chloroplast |
28 | NC_008235 | AGTA | 3 | 67258 | 67268 | 11 | Populus alba chloroplast |
29 | NC_008336 | AGTA | 3 | 154629 | 154639 | 11 | Nandina domestica chloroplast |
30 | NC_008407 | AGTA | 3 | 85357 | 85367 | 11 | Jasminum nudiflorum chloroplast |
31 | NC_008408 | AGTA | 3 | 22758 | 22768 | 11 | Bigelowiella natans plastid |
32 | NC_009143 | AGTA | 3 | 67704 | 67714 | 11 | Populus trichocarpa chloroplast |
33 | NC_009962 | AGTA | 3 | 154371 | 154381 | 11 | Ceratophyllum demersum chloroplast |
34 | NC_010109 | AGTA | 3 | 122120 | 122131 | 12 | Lemna minor chloroplast |
35 | NC_010442 | AGTA | 3 | 80861 | 80871 | 11 | Trachelium caeruleum chloroplast |
36 | NC_010776 | AGTA | 3 | 7753 | 7763 | 11 | Fagopyrum esculentum subsp. ancestrale chloroplast |
37 | NC_011395 | AGTA | 3 | 4345 | 4355 | 11 | Babesia bovis T2Bo apicoplast |
38 | NC_012099 | AGTA | 3 | 20880 | 20890 | 11 | Pyramimonas parkeae chloroplast |
39 | NC_014056 | AGTA | 3 | 29840 | 29850 | 11 | Oncidium Gower Ramsey chloroplast |