ChloroMitoSSRDB 2.0 Webserver cum Database of Cholorplast and Mitochondrial Microsatellites

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Chloroplast Motifs - Imperfect ATCC Repeats

S.NoSequence IDMotifIterationsStartEndTract LengthSequence Name
1NC_001603ATCC535437219 Euglena gracilis chloroplast
2NC_011087ATCC332524832526013Paulinella chromatophora chromatophore
3NC_014346ATCC320059420060411Floydiella terrestris chloroplast
4NC_014348ATCC36901691212Pteridium aquilinum subsp. aquilinum chloroplast
5NC_014569ATCC3864188642912Erodium texanum plastid
6NC_014570ATCC310763210764312Eucalyptus grandis chloroplast
7NC_014573ATCC3806988070912Geranium palmatum plastid
8NC_014575ATCC3357193573012Cedrus deodara chloroplast
9NC_014575ATCC3960979610711Cedrus deodara chloroplast
10NC_014582ATCC310447710448812Monsonia speciosa plastid
11NC_014674ATCC310852810853912Castanea mollissima chloroplast
12NC_014675ATCC3980309804112Isoetes flaccida chloroplast
13NC_014697ATCC310468710469812Prunus persica chloroplast
14NC_014807ATCC310706410707512Corynocarpus laevigata chloroplast
15NC_015083ATCC3959329594312Erodium carvifolium chloroplast
16NC_015113ATCC310275110276212Anthriscus cerefolium chloroplast
17NC_015139ATCC310210010211112Brassica rapa subsp. pekinensis chloroplast
18NC_015206ATCC310408110409212Fragaria vesca subsp. vesca chloroplast
19NC_015308ATCC310826510827612Hevea brasiliensis chloroplast
20NC_015359ATCC3611356114511Chlorella variabilis plastid
21NC_015401ATCC310473810474912Olea europaea subsp. europaea plastid
22NC_015543ATCC310084410085512Jacobaea vulgaris chloroplast
23NC_015604ATCC310474610475712Olea europaea subsp. cuspidata chloroplast
24NC_015605ATCC311061511062612Nelumbo lutea chloroplast
25NC_015608ATCC310483010484112Olea woodiana subsp. woodiana chloroplast
26NC_015610ATCC311071411072512Nelumbo nucifera chloroplast
27NC_015621ATCC313301113302212Ageratina adenophora chloroplast
28NC_015623ATCC310475710476812Olea europaea subsp. maroccana chloroplast
29NC_015645ATCC3831538316311Schizomeris leibleinii chloroplast
30NC_015803ATCC3970389704912Indocalamus longiauritus plastid
31NC_015817ATCC3969789698912Phyllostachys edulis chloroplast
32NC_015820ATCC3970359704612Acidosasa purpurea chloroplast
33NC_015826ATCC3969999701012Phyllostachys nigra var. henonis chloroplast
34NC_015830ATCC3967569676712Bambusa emeiensis chloroplast
35NC_015831ATCC3968879689812Ferrocalamus rimosivaginus plastid
36NC_015891ATCC311019911021012Spirodela polyrhiza chloroplast
37NC_015892ATCC310679010680112Magnolia kwangsiensis chloroplast
38NC_015894ATCC311084511085612Wolffiella lingulata chloroplast
39NC_015899ATCC311046311047412Wolffia australiana chloroplast
40NC_015983ATCC310451310452412Cucumis melo subsp. melo chloroplast
41NC_015990ATCC3965379654812Panicum virgatum chloroplast
42NC_015990ATCC311640311641412Panicum virgatum chloroplast
43NC_015996ATCC310657610658712Pyrus pyrifolia chloroplast
44NC_016058ATCC3559285593912Larix decidua chloroplast
45NC_016058ATCC3747837479412Larix decidua chloroplast
46NC_016063ATCC3752777528913Cephalotaxus wilsoniana chloroplast DNA
47NC_016064ATCC3879708798112Pseudotsuga sinensis var. wilsoniana chloroplast
48NC_016064ATCC310603710604812Pseudotsuga sinensis var. wilsoniana chloroplast
49NC_016068ATCC310478710479812Nicotiana undulata chloroplast
50NC_016430ATCC310470510471612Eleutherococcus senticosus chloroplast
51NC_016433ATCC310280310281412Sesamum indicum chloroplast
52NC_016468ATCC310283710284812Boea hygrometrica chloroplast
53NC_016677ATCC3947349474512Leersia tisserantii plastid
54NC_016699ATCC3969939700412Phyllostachys propinqua chloroplast
55NC_016718ATCC3948869489712Rhynchoryza subulata plastid
56NC_016727ATCC3997499976012Silene vulgaris chloroplast
57NC_016728ATCC3951409515112Silene noctiflora chloroplast
58NC_016729ATCC3952279523812Silene conica chloroplast
59NC_016729ATCC314273614274611Silene conica chloroplast
60NC_016730ATCC310018510019612Silene latifolia chloroplast
61NC_016734ATCC310183310184412Brassica napus chloroplast
62NC_016736ATCC310931210932312Ricinus communis chloroplast
63NC_016753ATCC310874310875412Colocasia esculenta chloroplast
64NC_016921ATCC310374610375712Pentactina rupicola chloroplast
65NC_016927ATCC3934159342612Oryza meridionalis chloroplast
66NC_016986ATCC3295372954711Ginkgo biloba chloroplast
67NC_016986ATCC3299642997411Ginkgo biloba chloroplast
68NC_016986ATCC310956010957112Ginkgo biloba chloroplast
69NC_017006ATCC310998911000012Mankyua chejuensis chloroplast
70NC_017602ATCC310447310448412Elaeis guineensis chloroplast
71NC_017835ATCC3934049341512Oryza rufipogon chloroplast
72NC_018114ATCC310133710134812Erycina pusilla chloroplast
73NC_018117ATCC310450110451212Datura stramonium chloroplast
74NC_018357ATCC310690210691312Magnolia denudata chloroplast
75NC_018552ATCC310574210575312Capsicum annuum chloroplast
76NC_018565ATCC310283610284712Pachycladon enysii chloroplast
77NC_018569ATCC310967710968711Trebouxiophyceae sp. MX-AZ01 chloroplast
78NC_018766ATCC310413110414212Fragaria vesca subsp. bracteata chloroplast
79NC_018767ATCC310414310415412Fragaria mandshurica plastid
80NC_019601ATCC310403510404612Fragaria chiloensis chloroplast
81NC_019602ATCC310405410406512Fragaria virginiana chloroplast
82NC_019616ATCC311173711174812Vaccinium macrocarpon plastid
83NC_019648ATCC3934119342212Festuca altissima plastid
84NC_019649ATCC3917259173612Festuca ovina plastid
85NC_019650ATCC3935269353712Festuca pratensis plastid
86NC_019651ATCC3934389344912Lolium multiflorum plastid
87NC_020019ATCC310519210520312Camellia sinensis chloroplast
88NC_020092ATCC310095910097012Chrysanthemum x morifolium chloroplast
89NC_020098ATCC310319910321012Tectona grandis chloroplast
90NC_020147ATCC310222710223812Ophioglossum californicum chloroplast
91NC_020152ATCC310883010884112Quercus rubra plastid
92NC_020316ATCC310701110702212Magnolia officinalis chloroplast
93NC_020317ATCC310699610700712Magnolia officinalis subsp. biloba voucher SC001 chloroplast
94NC_020318ATCC310655110656212Magnolia grandiflora voucher NJ016 chloroplast
95NC_020319ATCC313185113186212Cycas revoluta chloroplast
96NC_020320ATCC310091410092512Chrysanthemum indicum voucher HeN001 chloroplast
97NC_020341ATCC3963979640812Arundinaria gigantea chloroplast
98NC_020362ATCC310905810906912Heliconia collinsiana plastid
99NC_020363ATCC310435310436412Zingiber spectabile plastid
100NC_020364ATCC310519110520212Pseudophoenix vinifera plastid
101NC_020365ATCC310481510482612Calamus caryotoides plastid
102NC_020366ATCC310584310585412Bismarckia nobilis plastid
103NC_020367ATCC310571310572412Dasypogon bromeliifolius plastid
104NC_020431ATCC310077910079012Salvia miltiorrhiza chloroplast
105NC_020607ATCC310093510094612Artemisia frigida chloroplast
106NC_020795ATCC39544955411Chondrus crispus plastid complete genome
107NC_021101ATCC310487210488312Francoa sonchifolia plastid
108NC_021102ATCC310248010249112Pachycladon cheesemanii chloroplast
109NC_021110ATCC3747547476613Cephalotaxus oliveri chloroplast
110NC_021110ATCC3760737608513Cephalotaxus oliveri chloroplast
111NC_021111ATCC3159081591912Cistanche deserticola chloroplast
112NC_021372ATCC3983159832612Pharus latifolius chloroplast
113NC_021423ATCC310390910392012Catharanthus roseus cultivar Pacifica Punch Halo chloroplast
114NC_021425ATCC310710710711812Tetracentron sinense chloroplast
115NC_021426ATCC310824810825912Trochodendron aralioides chloroplast
116NC_021439ATCC3264912650111Pinus massoniana chloroplast
117NC_021439ATCC3865338654412Pinus massoniana chloroplast
118NC_021440ATCC3272882729811Pinus taeda chloroplast
119NC_021440ATCC3872788728912Pinus taeda chloroplast
120NC_021449ATCC3995989960912Utricularia gibba chloroplast
121NC_021455ATCC310387110388212Prinsepia utilis plastid
122NC_021760ATCC3957049571512Triticum monococcum chloroplast
123NC_021761ATCC3941549416512Secale cereale chloroplast
124NC_021762ATCC3950799509012Triticum urartu chloroplast
125NC_022133ATCC3934199343012Aegilops tauschii chloroplast
126NC_022135ATCC3928259283612Aegilops speltoides isolate SPE0661 chloroplast
127NC_000932ATCC310310410311512 Arabidopsis thaliana chloroplast
128NC_001320ATCC3934069341712 Oryza sativa Japonica Group plastid
129NC_001631ATCC3264182642811 Pinus thunbergii chloroplast
130NC_001631ATCC3865218653212 Pinus thunbergii chloroplast
131NC_001666ATCC3972609727112 Zea mays chloroplast
132NC_001666ATCC311711911713012 Zea mays chloroplast
133NC_001879ATCC310485610486712 Nicotiana tabacum plastid
134NC_002202ATCC310004010005112 Spinacia oleracea plastid
135NC_002693ATCC310939910941012 Oenothera elata subsp. hookeri plastid plastome I
136NC_002762ATCC3931589316912 Triticum aestivum chloroplast
137NC_004561ATCC310516410517512 Atropa belladonna chloroplast
138NC_004677ATCC3261832619311 Pinus koraiensis chloroplast
139NC_004677ATCC3849358494612 Pinus koraiensis chloroplast
140NC_004993ATCC310348910350012 Calycanthus floridus var. glaucus chloroplast
141NC_005086ATCC313464613465712 Amborella trichopoda chloroplast
142NC_005878ATCC3184141842512 Saccharum hybrid cultivar SP-80-3280 chloroplast
143NC_005878ATCC3383133832412 Saccharum hybrid cultivar SP-80-3280 chloroplast
144NC_005973ATCC3933549336512 Oryza nivara chloroplast
145NC_006050ATCC310866410867512 Nymphaea alba chloroplast
146NC_006050ATCC312585412586613 Nymphaea alba chloroplast
147NC_006084ATCC3979719798212 Saccharum hybrid cultivar NCo 310 chloroplast
148NC_006084ATCC311787011788112 Saccharum hybrid cultivar NCo 310 chloroplast
149NC_006290ATCC310401910403012 Panax ginseng chloroplast
150NC_007144ATCC310432110433212 Cucumis sativus chloroplast
151NC_007407ATCC310194610195712 Acorus calamus plastid
152NC_007500ATCC310485410486512 Nicotiana sylvestris chloroplast
153NC_007578ATCC310228310229412 Lactuca sativa chloroplast
154NC_007602ATCC310462610463712 Nicotiana tomentosiformis chloroplast
155NC_007898ATCC310407110408212 Solanum lycopersicum chloroplast
156NC_007943ATCC310394610395712 Solanum bulbocastanum chloroplast
157NC_007957ATCC310788710789812 Vitis vinifera chloroplast
158NC_007977ATCC310131110132212 Helianthus annuus chloroplast
159NC_008096ATCC310389910391012 Solanum tuberosum chloroplast
160NC_008115ATCC310775910777012 Eucalyptus globulus subsp. globulus chloroplast
161NC_008155ATCC3933599337012 Oryza sativa Indica Group chloroplast
162NC_008235ATCC310398510399612 Populus alba chloroplast
163NC_008325ATCC310313610314712 Daucus carota chloroplast
164NC_008326ATCC310691610692712 Liriodendron tulipifera chloroplast
165NC_008335ATCC311038711039812 Platanus occidentalis chloroplast
166NC_008336ATCC310416710417812 Nandina domestica chloroplast
167NC_008359ATCC310560510561612 Morus indica chloroplast
168NC_008454ATCC319263519264612 Pelargonium x hortorum chloroplast
169NC_008456ATCC310772410773512 Drimys granadensis chloroplast
170NC_008457ATCC3629786299013 Piper cenocladum chloroplast
171NC_008457ATCC310671810672912 Piper cenocladum chloroplast
172NC_008535ATCC310342510343612 Coffea arabica chloroplast
173NC_008590ATCC3947929480312 Hordeum vulgare subsp. vulgare chloroplast
174NC_008591ATCC3948719488212 Agrostis stolonifera chloroplast
175NC_008602ATCC3981389814912 Sorghum bicolor chloroplast
176NC_008602ATCC311797811798912 Sorghum bicolor chloroplast
177NC_008796ATCC310308410309512 Ranunculus macranthus chloroplast
178NC_008822ATCC314152014153011 Chlorokybus atmophyticus chloroplast
179NC_009143ATCC310448610449712 Populus trichocarpa chloroplast
180NC_009265ATCC310237010238112 Aethionema cordifolium chloroplast
181NC_009266ATCC310241610242712 Aethionema grandiflorum chloroplast
182NC_009267ATCC310281510282612 Olimarabidopsis pumila chloroplast
183NC_009268ATCC310168810169912 Arabis hirsuta chloroplast
184NC_009269ATCC310236510237612 Barbarea verna chloroplast
185NC_009270ATCC310265310266412 Capsella bursa-pastoris chloroplast
186NC_009271ATCC310306310307412 Crucihimalaya wallichii chloroplast
187NC_009272ATCC310126410127512 Draba nemorosa chloroplast
188NC_009273ATCC310293110294212 Lepidium virginicum chloroplast
189NC_009274ATCC310113910115012 Lobularia maritima chloroplast
190NC_009275ATCC310321410322512 Nasturtium officinale chloroplast
191NC_009598ATCC310538510539612 Chloranthus spicatus chloroplast
192NC_009599ATCC310697010698112 Buxus microphylla chloroplast
193NC_009600ATCC310620110621212 Illicium oligandrum chloroplast
194NC_009600ATCC312486812488013 Illicium oligandrum chloroplast
195NC_009601ATCC310145610146712 Dioscorea elephantipes chloroplast
196NC_009618ATCC310785110786212 Cycas taitungensis chloroplast
197NC_009766ATCC3901909020112 Cuscuta reflexa chloroplast
198NC_009808ATCC310392610393712 Ipomoea purpurea chloroplast
199NC_009950ATCC3935779358812 Lolium perenne chloroplast
200NC_009962ATCC3625106252213 Ceratophyllum demersum chloroplast
201NC_009963ATCC3933879339812 Cuscuta exaltata chloroplast
202NC_010093ATCC310162110163212 Acorus americanus chloroplast
203NC_010109ATCC310825110826212 Lemna minor chloroplast
204NC_010358ATCC310867110868212 Oenothera argillicola chloroplast
205NC_010359ATCC3422064221712 Aneura mirabilis chloroplast
206NC_010359ATCC3529315294212 Aneura mirabilis chloroplast
207NC_010360ATCC310935610936712 Oenothera glazioviana chloroplast
208NC_010361ATCC310882410883512 Oenothera biennis chloroplast
209NC_010362ATCC310749010750112 Oenothera parviflora chloroplast
210NC_010433ATCC310833310834412 Manihot esculenta chloroplast
211NC_010442ATCC310306110307212 Trachelium caeruleum chloroplast
212NC_010601ATCC310173710174812 Guizotia abyssinica chloroplast
213NC_010654ATCC3819378194812 Welwitschia mirabilis chloroplast
214NC_010654ATCC3947339474311 Welwitschia mirabilis chloroplast
215NC_010776ATCC310307410308512 Fagopyrum esculentum subsp. ancestrale chloroplast
216NC_010776ATCC315127015128011 Fagopyrum esculentum subsp. ancestrale chloroplast
217NC_011031ATCC319502919504012 Oedogonium cardiacum chloroplast
218NC_011152ATCC3263732638311 Picea sitchensis chloroplast
219NC_011152ATCC3561195613113 Picea sitchensis chloroplast
220NC_011152ATCC3869008691112 Picea sitchensis chloroplast
221NC_011152ATCC310586910588012 Picea sitchensis chloroplast
222NC_011153ATCC3264862649611 Pinus contorta chloroplast
223NC_011153ATCC3865468655712 Pinus contorta chloroplast
224NC_011154ATCC3262332624311 Pinus gerardiana chloroplast
225NC_011154ATCC3857788578912 Pinus gerardiana chloroplast
226NC_011155ATCC3261452615511 Pinus krempfii chloroplast
227NC_011155ATCC3855938560412 Pinus krempfii chloroplast
228NC_011156ATCC3262682627811 Pinus lambertiana chloroplast
229NC_011156ATCC3850948510512 Pinus lambertiana chloroplast
230NC_011158ATCC3259902600011 Pinus monophylla chloroplast
231NC_011158ATCC3853548536512 Pinus monophylla chloroplast
232NC_011159ATCC3259402595011 Pinus nelsonii chloroplast
233NC_011159ATCC3859078591812 Pinus nelsonii chloroplast
234NC_011163ATCC3886778868711 Cicer arietinum chloroplast
235NC_011713ATCC3943509436112 Festuca arundinacea chloroplast
236NC_011930ATCC37298730912 Keteleeria davidiana chloroplast
237NC_011930ATCC3672806729011 Keteleeria davidiana chloroplast
238NC_011930ATCC3909359094612 Keteleeria davidiana chloroplast
239NC_012224ATCC311013811014912 Jatropha curcas chloroplast
240NC_012615ATCC310731310732412 Megaleranthis saniculifolia chloroplast
241NC_012818ATCC310616810617912 Alsophila spinulosa chloroplast
242NC_012927ATCC3966459665612 Bambusa oldhamii chloroplast
243NC_013088ATCC3967349674512 Dendrocalamus latiflorus chloroplast
244NC_013273ATCC3976749768512 Coix lacryma-jobi chloroplast
245NC_013273ATCC311751311752412 Coix lacryma-jobi chloroplast
246NC_013359ATCC310905910907012 Bryopsis hypnoides chloroplast
247NC_013553ATCC310283410284512 Parthenium argentatum chloroplast
248NC_013823ATCC310853210854312 Typha latifolia chloroplast
249NC_013991ATCC310566110567212 Phoenix dactylifera chloroplast
250NC_014056ATCC310149410150512 Oncidium Gower Ramsey chloroplast
251NC_014062ATCC3946739468412 Anomochloa marantoidea chloroplast
252NC_013707ATCC310472410473512 Olea europaea chloroplast