Chloroplast Motifs - Imperfect CATAC Repeats
S.No | Sequence ID | Motif | Iterations | Start | End | Tract Length | Sequence Name |
---|---|---|---|---|---|---|---|
1 | NC_014570 | CATAC | 3 | 150905 | 150918 | 14 | Eucalyptus grandis chloroplast |
2 | NC_014676 | CATAC | 3 | 151281 | 151294 | 14 | Theobroma cacao chloroplast |
3 | NC_014697 | CATAC | 3 | 148281 | 148294 | 14 | Prunus persica chloroplast |
4 | NC_015113 | CATAC | 3 | 145985 | 145998 | 14 | Anthriscus cerefolium chloroplast |
5 | NC_015204 | CATAC | 3 | 150952 | 150965 | 14 | Gossypium thurberi chloroplast |
6 | NC_015206 | CATAC | 3 | 146474 | 146487 | 14 | Fragaria vesca subsp. vesca chloroplast |
7 | NC_015308 | CATAC | 3 | 151787 | 151800 | 14 | Hevea brasiliensis chloroplast |
8 | NC_015401 | CATAC | 3 | 146641 | 146654 | 14 | Olea europaea subsp. europaea plastid |
9 | NC_015604 | CATAC | 3 | 146628 | 146641 | 14 | Olea europaea subsp. cuspidata chloroplast |
10 | NC_015605 | CATAC | 3 | 153921 | 153934 | 14 | Nelumbo lutea chloroplast |
11 | NC_015608 | CATAC | 3 | 146716 | 146729 | 14 | Olea woodiana subsp. woodiana chloroplast |
12 | NC_015610 | CATAC | 3 | 154004 | 154017 | 14 | Nelumbo nucifera chloroplast |
13 | NC_015623 | CATAC | 3 | 146662 | 146675 | 14 | Olea europaea subsp. maroccana chloroplast |
14 | NC_015892 | CATAC | 3 | 150473 | 150486 | 14 | Magnolia kwangsiensis chloroplast |
15 | NC_015996 | CATAC | 3 | 150441 | 150454 | 14 | Pyrus pyrifolia chloroplast |
16 | NC_016068 | CATAC | 3 | 146641 | 146654 | 14 | Nicotiana undulata chloroplast |
17 | NC_016430 | CATAC | 3 | 148022 | 148035 | 14 | Eleutherococcus senticosus chloroplast |
18 | NC_016433 | CATAC | 3 | 144610 | 144623 | 14 | Sesamum indicum chloroplast |
19 | NC_016468 | CATAC | 3 | 144242 | 144255 | 14 | Boea hygrometrica chloroplast |
20 | NC_016668 | CATAC | 3 | 150802 | 150815 | 14 | Gossypium raimondii chloroplast |
21 | NC_016670 | CATAC | 3 | 151069 | 151082 | 14 | Gossypium darwinii chloroplast |
22 | NC_016690 | CATAC | 3 | 151124 | 151137 | 14 | Gossypium tomentosum chloroplast |
23 | NC_016692 | CATAC | 3 | 151002 | 151015 | 14 | Gossypium herbaceum subsp. africanum chloroplast |
24 | NC_016711 | CATAC | 3 | 150997 | 151010 | 14 | Gossypium mustelinum chloroplast |
25 | NC_016712 | CATAC | 3 | 150917 | 150930 | 14 | Gossypium arboreum chloroplast |
26 | NC_016736 | CATAC | 3 | 153130 | 153143 | 14 | Ricinus communis chloroplast |
27 | NC_016921 | CATAC | 3 | 147202 | 147215 | 14 | Pentactina rupicola chloroplast |
28 | NC_017894 | CATAC | 3 | 150665 | 150678 | 14 | Gossypium gossypioides chloroplast |
29 | NC_018109 | CATAC | 3 | 149903 | 149916 | 14 | Gossypium incanum chloroplast |
30 | NC_018110 | CATAC | 3 | 150225 | 150238 | 14 | Gossypium somalense chloroplast |
31 | NC_018111 | CATAC | 3 | 150142 | 150155 | 14 | Gossypium capitis-viridis chloroplast |
32 | NC_018112 | CATAC | 3 | 150258 | 150271 | 14 | Gossypium areysianum chloroplast |
33 | NC_018113 | CATAC | 3 | 150535 | 150548 | 14 | Gossypium robinsonii chloroplast |
34 | NC_018117 | CATAC | 3 | 146607 | 146620 | 14 | Datura stramonium chloroplast |
35 | NC_018357 | CATAC | 3 | 150832 | 150845 | 14 | Magnolia denudata chloroplast |
36 | NC_018552 | CATAC | 3 | 147290 | 147303 | 14 | Capsicum annuum chloroplast |
37 | NC_018565 | CATAC | 3 | 145522 | 145535 | 14 | Pachycladon enysii chloroplast |
38 | NC_019601 | CATAC | 3 | 146380 | 146393 | 14 | Fragaria chiloensis chloroplast |
39 | NC_019602 | CATAC | 3 | 146398 | 146411 | 14 | Fragaria virginiana chloroplast |
40 | NC_020019 | CATAC | 3 | 147784 | 147797 | 14 | Camellia sinensis chloroplast |
41 | NC_020098 | CATAC | 3 | 144673 | 144686 | 14 | Tectona grandis chloroplast |
42 | NC_020152 | CATAC | 3 | 152045 | 152058 | 14 | Quercus rubra plastid |
43 | NC_020316 | CATAC | 3 | 150962 | 150975 | 14 | Magnolia officinalis chloroplast |
44 | NC_020317 | CATAC | 3 | 150884 | 150897 | 14 | Magnolia officinalis subsp. biloba voucher SC001 chloroplast |
45 | NC_020318 | CATAC | 3 | 150413 | 150426 | 14 | Magnolia grandiflora voucher NJ016 chloroplast |
46 | NC_020431 | CATAC | 3 | 142060 | 142073 | 14 | Salvia miltiorrhiza chloroplast |
47 | NC_021101 | CATAC | 3 | 148028 | 148041 | 14 | Francoa sonchifolia plastid |
48 | NC_021102 | CATAC | 3 | 145123 | 145136 | 14 | Pachycladon cheesemanii chloroplast |
49 | NC_021111 | CATAC | 3 | 44431 | 44444 | 14 | Cistanche deserticola chloroplast |
50 | NC_021121 | CATAC | 3 | 147187 | 147200 | 14 | Ardisia polysticta chloroplast |
51 | NC_021423 | CATAC | 3 | 145704 | 145717 | 14 | Catharanthus roseus cultivar Pacifica Punch Halo chloroplast |
52 | NC_021449 | CATAC | 3 | 143003 | 143016 | 14 | Utricularia gibba chloroplast |
53 | NC_021455 | CATAC | 3 | 146759 | 146772 | 14 | Prinsepia utilis plastid |
54 | NC_000932 | CATAC | 3 | 145091 | 145104 | 14 | Arabidopsis thaliana chloroplast |
55 | NC_001879 | CATAC | 3 | 146698 | 146711 | 14 | Nicotiana tabacum plastid |
56 | NC_002202 | CATAC | 3 | 142534 | 142547 | 14 | Spinacia oleracea plastid |
57 | NC_002693 | CATAC | 3 | 155707 | 155720 | 14 | Oenothera elata subsp. hookeri plastid plastome I |
58 | NC_004561 | CATAC | 3 | 147359 | 147372 | 14 | Atropa belladonna chloroplast |
59 | NC_004993 | CATAC | 3 | 145684 | 145697 | 14 | Calycanthus floridus var. glaucus chloroplast |
60 | NC_005086 | CATAC | 3 | 153478 | 153491 | 14 | Amborella trichopoda chloroplast |
61 | NC_006050 | CATAC | 3 | 150828 | 150841 | 14 | Nymphaea alba chloroplast |
62 | NC_006290 | CATAC | 3 | 147603 | 147616 | 14 | Panax ginseng chloroplast |
63 | NC_007500 | CATAC | 3 | 146696 | 146709 | 14 | Nicotiana sylvestris chloroplast |
64 | NC_007602 | CATAC | 3 | 146439 | 146452 | 14 | Nicotiana tomentosiformis chloroplast |
65 | NC_007898 | CATAC | 3 | 146107 | 146120 | 14 | Solanum lycopersicum chloroplast |
66 | NC_007943 | CATAC | 3 | 146048 | 146061 | 14 | Solanum bulbocastanum chloroplast |
67 | NC_007944 | CATAC | 3 | 150992 | 151005 | 14 | Gossypium hirsutum chloroplast |
68 | NC_008096 | CATAC | 3 | 146001 | 146014 | 14 | Solanum tuberosum chloroplast |
69 | NC_008115 | CATAC | 3 | 151048 | 151061 | 14 | Eucalyptus globulus subsp. globulus chloroplast |
70 | NC_008235 | CATAC | 3 | 146777 | 146790 | 14 | Populus alba chloroplast |
71 | NC_008325 | CATAC | 3 | 147231 | 147244 | 14 | Daucus carota chloroplast |
72 | NC_008326 | CATAC | 3 | 150698 | 150711 | 14 | Liriodendron tulipifera chloroplast |
73 | NC_008334 | CATAC | 3 | 150285 | 150298 | 14 | Citrus sinensis chloroplast |
74 | NC_008336 | CATAC | 3 | 147298 | 147311 | 14 | Nandina domestica chloroplast |
75 | NC_008407 | CATAC | 3 | 156646 | 156659 | 14 | Jasminum nudiflorum chloroplast |
76 | NC_008456 | CATAC | 3 | 150980 | 150993 | 14 | Drimys granadensis chloroplast |
77 | NC_008641 | CATAC | 3 | 151024 | 151037 | 14 | Gossypium barbadense chloroplast |
78 | NC_008788 | CATAC | 3 | 151530 | 151543 | 14 | Nuphar advena chloroplast |
79 | NC_009143 | CATAC | 3 | 147295 | 147308 | 14 | Populus trichocarpa chloroplast |
80 | NC_009265 | CATAC | 3 | 144766 | 144779 | 14 | Aethionema cordifolium chloroplast |
81 | NC_009266 | CATAC | 3 | 144873 | 144886 | 14 | Aethionema grandiflorum chloroplast |
82 | NC_009267 | CATAC | 3 | 145358 | 145371 | 14 | Olimarabidopsis pumila chloroplast |
83 | NC_009268 | CATAC | 3 | 144304 | 144317 | 14 | Arabis hirsuta chloroplast |
84 | NC_009269 | CATAC | 3 | 145156 | 145169 | 14 | Barbarea verna chloroplast |
85 | NC_009270 | CATAC | 3 | 145124 | 145137 | 14 | Capsella bursa-pastoris chloroplast |
86 | NC_009271 | CATAC | 3 | 145795 | 145808 | 14 | Crucihimalaya wallichii chloroplast |
87 | NC_009272 | CATAC | 3 | 143976 | 143989 | 14 | Draba nemorosa chloroplast |
88 | NC_009273 | CATAC | 3 | 145383 | 145396 | 14 | Lepidium virginicum chloroplast |
89 | NC_009274 | CATAC | 3 | 143285 | 143298 | 14 | Lobularia maritima chloroplast |
90 | NC_009599 | CATAC | 3 | 149770 | 149783 | 14 | Buxus microphylla chloroplast |
91 | NC_009766 | CATAC | 3 | 118817 | 118830 | 14 | Cuscuta reflexa chloroplast |
92 | NC_009963 | CATAC | 3 | 122672 | 122685 | 14 | Cuscuta exaltata chloroplast |
93 | NC_010323 | CATAC | 3 | 150667 | 150680 | 14 | Carica papaya chloroplast |
94 | NC_010358 | CATAC | 3 | 154960 | 154973 | 14 | Oenothera argillicola chloroplast |
95 | NC_010360 | CATAC | 3 | 155079 | 155092 | 14 | Oenothera glazioviana chloroplast |
96 | NC_010361 | CATAC | 3 | 154947 | 154960 | 14 | Oenothera biennis chloroplast |
97 | NC_010362 | CATAC | 3 | 153537 | 153550 | 14 | Oenothera parviflora chloroplast |
98 | NC_010433 | CATAC | 3 | 151897 | 151910 | 14 | Manihot esculenta chloroplast |
99 | NC_010776 | CATAC | 3 | 150557 | 150570 | 14 | Fagopyrum esculentum subsp. ancestrale chloroplast |
100 | NC_012615 | CATAC | 3 | 150619 | 150632 | 14 | Megaleranthis saniculifolia chloroplast |
101 | NC_013707 | CATAC | 3 | 146631 | 146644 | 14 | Olea europaea chloroplast |