ChloroMitoSSRDB 2.0 Webserver cum Database of Cholorplast and Mitochondrial Microsatellites

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Chloroplast Motifs - Imperfect GAGG Repeats

S.NoSequence IDMotifIterationsStartEndTract LengthSequence Name
1NC_014348GAGG314727814728912Pteridium aquilinum subsp. aquilinum chloroplast
2NC_014570GAGG311089611090712Eucalyptus grandis chloroplast
3NC_014573GAGG3904429045312Geranium palmatum plastid
4NC_014575GAGG3389743898512Cedrus deodara chloroplast
5NC_014582GAGG310775210776312Monsonia speciosa plastid
6NC_014592GAGG315068215069312Cheilanthes lindheimeri chloroplast
7NC_014674GAGG311178311179412Castanea mollissima chloroplast
8NC_014675GAGG310113510114612Isoetes flaccida chloroplast
9NC_014676GAGG311160511161612Theobroma cacao chloroplast
10NC_014697GAGG310795210796312Prunus persica chloroplast
11NC_014699GAGG3995769958712Equisetum arvense chloroplast
12NC_014807GAGG311022811023912Corynocarpus laevigata chloroplast
13NC_015083GAGG3998619987212Erodium carvifolium chloroplast
14NC_015113GAGG310601810602912Anthriscus cerefolium chloroplast
15NC_015139GAGG310520910522012Brassica rapa subsp. pekinensis chloroplast
16NC_015204GAGG311098811099912Gossypium thurberi chloroplast
17NC_015206GAGG310735910737012Fragaria vesca subsp. vesca chloroplast
18NC_015308GAGG311149011150112Hevea brasiliensis chloroplast
19NC_015401GAGG310799210800312Olea europaea subsp. europaea plastid
20NC_015402GAGG3869418695212Ptilidium pulcherrimum chloroplast
21NC_015543GAGG310393710394812Jacobaea vulgaris chloroplast
22NC_015604GAGG310800010801112Olea europaea subsp. cuspidata chloroplast
23NC_015605GAGG311367911369012Nelumbo lutea chloroplast
24NC_015608GAGG310808410809512Olea woodiana subsp. woodiana chloroplast
25NC_015610GAGG311377811378912Nelumbo nucifera chloroplast
26NC_015621GAGG310539010540112Ageratina adenophora chloroplast
27NC_015623GAGG310801110802212Olea europaea subsp. maroccana chloroplast
28NC_015891GAGG311330111331212Spirodela polyrhiza chloroplast
29NC_015892GAGG311000011001112Magnolia kwangsiensis chloroplast
30NC_015894GAGG311395811396912Wolffiella lingulata chloroplast
31NC_015899GAGG311356411357512Wolffia australiana chloroplast
32NC_015983GAGG310763810764912Cucumis melo subsp. melo chloroplast
33NC_015996GAGG310984110985212Pyrus pyrifolia chloroplast
34NC_016058GAGG3591945920512Larix decidua chloroplast
35NC_016064GAGG3912189122912Pseudotsuga sinensis var. wilsoniana chloroplast
36NC_016068GAGG310771310772412Nicotiana undulata chloroplast
37NC_016430GAGG310795910797012Eleutherococcus senticosus chloroplast
38NC_016471GAGG3568265683712Neottia nidus-avis plastid
39NC_016668GAGG311093411094512Gossypium raimondii chloroplast
40NC_016670GAGG311112611113712Gossypium darwinii chloroplast
41NC_016670GAGG311523911524911Gossypium darwinii chloroplast
42NC_016690GAGG311116411117512Gossypium tomentosum chloroplast
43NC_016690GAGG311527711528711Gossypium tomentosum chloroplast
44NC_016692GAGG311102211103312Gossypium herbaceum subsp. africanum chloroplast
45NC_016692GAGG311514011515011Gossypium herbaceum subsp. africanum chloroplast
46NC_016708GAGG3996489965912Millettia pinnata chloroplast
47NC_016708GAGG310514410515512Millettia pinnata chloroplast
48NC_016711GAGG311104711105812Gossypium mustelinum chloroplast
49NC_016711GAGG311516011517011Gossypium mustelinum chloroplast
50NC_016712GAGG311095111096212Gossypium arboreum chloroplast
51NC_016712GAGG311506911507911Gossypium arboreum chloroplast
52NC_016727GAGG310302410303512Silene vulgaris chloroplast
53NC_016728GAGG3984129842312Silene noctiflora chloroplast
54NC_016729GAGG3985119852212Silene conica chloroplast
55NC_016730GAGG310346910348012Silene latifolia chloroplast
56NC_016734GAGG310489110490212Brassica napus chloroplast
57NC_016736GAGG311256611257712Ricinus communis chloroplast
58NC_016753GAGG311198311199412Colocasia esculenta chloroplast
59NC_016921GAGG310701410702512Pentactina rupicola chloroplast
60NC_016986GAGG311277911279012Ginkgo biloba chloroplast
61NC_017602GAGG310770910772012Elaeis guineensis chloroplast
62NC_017609GAGG310862110863212Phalaenopsis equestris chloroplast
63NC_017894GAGG311101311102412Gossypium gossypioides chloroplast
64NC_018051GAGG310363010364112Vigna unguiculata chloroplast
65NC_018109GAGG311007011008112Gossypium incanum chloroplast
66NC_018110GAGG311035211036312Gossypium somalense chloroplast
67NC_018111GAGG311030111031212Gossypium capitis-viridis chloroplast
68NC_018112GAGG311038411039512Gossypium areysianum chloroplast
69NC_018113GAGG311069011070112Gossypium robinsonii chloroplast
70NC_018114GAGG310458910460012Erycina pusilla chloroplast
71NC_018117GAGG310753510754612Datura stramonium chloroplast
72NC_018357GAGG311013811014912Magnolia denudata chloroplast
73NC_018541GAGG310725610726712Elodea canadensis chloroplast
74NC_018552GAGG310878110879212Capsicum annuum chloroplast
75NC_018565GAGG310608310609412Pachycladon enysii chloroplast
76NC_018766GAGG310740910742012Fragaria vesca subsp. bracteata chloroplast
77NC_018767GAGG310742110743212Fragaria mandshurica plastid
78NC_019601GAGG310731310732412Fragaria chiloensis chloroplast
79NC_019602GAGG310733210734312Fragaria virginiana chloroplast
80NC_019616GAGG311499011500112Vaccinium macrocarpon plastid
81NC_020019GAGG310845410846512Camellia sinensis chloroplast
82NC_020092GAGG310405110406212Chrysanthemum x morifolium chloroplast
83NC_020146GAGG3986109862112Equisetum hyemale chloroplast
84NC_020147GAGG310537710538812Ophioglossum californicum chloroplast
85NC_020147GAGG310697910699113Ophioglossum californicum chloroplast
86NC_020152GAGG311208411209512Quercus rubra plastid
87NC_020316GAGG311024811025912Magnolia officinalis chloroplast
88NC_020317GAGG311019411020512Magnolia officinalis subsp. biloba voucher SC001 chloroplast
89NC_020318GAGG310978610979712Magnolia grandiflora voucher NJ016 chloroplast
90NC_020319GAGG313506513507612Cycas revoluta chloroplast
91NC_020320GAGG310400710401812Chrysanthemum indicum voucher HeN001 chloroplast
92NC_020362GAGG311229411230512Heliconia collinsiana plastid
93NC_020363GAGG310759610760712Zingiber spectabile plastid
94NC_020364GAGG310843110844212Pseudophoenix vinifera plastid
95NC_020365GAGG310805210806312Calamus caryotoides plastid
96NC_020366GAGG310908510909612Bismarckia nobilis plastid
97NC_020367GAGG310896110897212Dasypogon bromeliifolius plastid
98NC_020607GAGG310402710403812Artemisia frigida chloroplast
99NC_021091GAGG310403210404312Vigna angularis chloroplast DNA
100NC_021101GAGG310816710817812Francoa sonchifolia plastid
101NC_021102GAGG310573610574712Pachycladon cheesemanii chloroplast
102NC_021121GAGG310788010789112Ardisia polysticta chloroplast
103NC_021423GAGG310720710721812Catharanthus roseus cultivar Pacifica Punch Halo chloroplast
104NC_021425GAGG311038111039212Tetracentron sinense chloroplast
105NC_021426GAGG311151711152812Trochodendron aralioides chloroplast
106NC_021429GAGG310818010819112Cymbidium aloifolium voucher KUN:YJB100604 chloroplast
107NC_021430GAGG310747510748612Cymbidium sinense voucher KUN:YJB100605 chloroplast
108NC_021431GAGG310752310753412Cymbidium tortisepalum voucher KUN:HJL091027 chloroplast
109NC_021432GAGG310752510753612Cymbidium tracyanum voucher KUN:YJB100606 chloroplast
110NC_021433GAGG310737210738312Cymbidium mannii voucher KUN:YJB100602 chloroplast
111NC_021438GAGG3826718268212Gnetum montanum chloroplast
112NC_021439GAGG3898038981412Pinus massoniana chloroplast
113NC_021440GAGG3905309054112Pinus taeda chloroplast
114NC_021455GAGG310714210715312Prinsepia utilis plastid
115NC_021636GAGG310557510558612Glycine tomentella voucher CSIRO:G1403 chloroplast
116NC_021645GAGG310529310530412Glycine cyrtoloba voucher CSIRO:G1267 chloroplast
117NC_021646GAGG310560410561512Glycine stenophita voucher CSIRO:G1974 chloroplast
118NC_021647GAGG310536410537512Glycine canescens voucher CSIRO:G1232 chloroplast
119NC_021648GAGG310561810562912Glycine dolichocarpa voucher CSIRO:G1134 chloroplast
120NC_021649GAGG310584110585212Glycine falcata voucher CSIRO:G1718 chloroplast
121NC_021650GAGG310562910564012Glycine syndetika voucher CSIRO:G1300 chloroplast
122NC_021936GAGG311059911061012Najas flexilis chloroplast
123NC_022136GAGG315125915127012Lygodium japonicum chloroplast
124NC_000932GAGG310613310614412 Arabidopsis thaliana chloroplast
125NC_001631GAGG3897928980312 Pinus thunbergii chloroplast
126NC_001879GAGG310777310778412 Nicotiana tabacum plastid
127NC_002202GAGG310309710310812 Spinacia oleracea plastid
128NC_002693GAGG311267011268112 Oenothera elata subsp. hookeri plastid plastome I
129NC_002694GAGG310336910338012 Lotus japonicus chloroplast
130NC_003386GAGG3964529646312 Psilotum nudum chloroplast
131NC_004561GAGG310806210807312 Atropa belladonna chloroplast
132NC_004677GAGG3881928820312 Pinus koraiensis chloroplast
133NC_004766GAGG314537514538612 Adiantum capillus-veneris chloroplast
134NC_004993GAGG310673310674412 Calycanthus floridus var. glaucus chloroplast
135NC_005086GAGG311299311300412 Amborella trichopoda chloroplast
136NC_006050GAGG311180811181912 Nymphaea alba chloroplast
137NC_006290GAGG310727110728212 Panax ginseng chloroplast
138NC_006861GAGG311335511336612 Huperzia lucidula chloroplast
139NC_007144GAGG310744810745912 Cucumis sativus chloroplast
140NC_007407GAGG310519110520212 Acorus calamus plastid
141NC_007499GAGG310849810850912 Phalaenopsis aphrodite subsp. formosana chloroplast
142NC_007500GAGG310777110778212 Nicotiana sylvestris chloroplast
143NC_007578GAGG310554410555512 Lactuca sativa chloroplast
144NC_007602GAGG310755210756312 Nicotiana tomentosiformis chloroplast
145NC_007898GAGG310710510711612 Solanum lycopersicum chloroplast
146NC_007942GAGG310497010498112 Glycine max chloroplast
147NC_007943GAGG310698010699112 Solanum bulbocastanum chloroplast
148NC_007944GAGG311103611104712 Gossypium hirsutum chloroplast
149NC_007944GAGG311514911515911 Gossypium hirsutum chloroplast
150NC_007957GAGG311114511115612 Vitis vinifera chloroplast
151NC_007977GAGG310441110442212 Helianthus annuus chloroplast
152NC_008096GAGG310693310694412 Solanum tuberosum chloroplast
153NC_008115GAGG311102411103512 Eucalyptus globulus subsp. globulus chloroplast
154NC_008235GAGG310723410724512 Populus alba chloroplast
155NC_008325GAGG310637610638712 Daucus carota chloroplast
156NC_008326GAGG311015711016812 Liriodendron tulipifera chloroplast
157NC_008334GAGG311042311043412 Citrus sinensis chloroplast
158NC_008335GAGG311362811363912 Platanus occidentalis chloroplast
159NC_008336GAGG310740710741812 Nandina domestica chloroplast
160NC_008359GAGG310885710886812 Morus indica chloroplast
161NC_008372GAGG33814382512 Stigeoclonium helveticum chloroplast
162NC_008407GAGG311313211314312 Jasminum nudiflorum chloroplast
163NC_008454GAGG319601519602612 Pelargonium x hortorum chloroplast
164NC_008457GAGG310997910999012 Piper cenocladum chloroplast
165NC_008535GAGG310668210669312 Coffea arabica chloroplast
166NC_008641GAGG311106011107112 Gossypium barbadense chloroplast
167NC_008788GAGG311255511256612 Nuphar advena chloroplast
168NC_008796GAGG310633210634312 Ranunculus macranthus chloroplast
169NC_008829GAGG310760910762012 Angiopteris evecta chloroplast
170NC_009143GAGG310774010775112 Populus trichocarpa chloroplast
171NC_009259GAGG310252110253212 Phaseolus vulgaris chloroplast
172NC_009265GAGG310561710562812 Aethionema cordifolium chloroplast
173NC_009266GAGG310566310567412 Aethionema grandiflorum chloroplast
174NC_009267GAGG310606210607312 Olimarabidopsis pumila chloroplast
175NC_009268GAGG310493410494512 Arabis hirsuta chloroplast
176NC_009269GAGG310561210562312 Barbarea verna chloroplast
177NC_009270GAGG310589210590312 Capsella bursa-pastoris chloroplast
178NC_009271GAGG310630210631312 Crucihimalaya wallichii chloroplast
179NC_009272GAGG310451610452712 Draba nemorosa chloroplast
180NC_009273GAGG310617810618912 Lepidium virginicum chloroplast
181NC_009274GAGG310439410440512 Lobularia maritima chloroplast
182NC_009275GAGG310646210647312 Nasturtium officinale chloroplast
183NC_009598GAGG310863910865012 Chloranthus spicatus chloroplast
184NC_009599GAGG311022411023512 Buxus microphylla chloroplast
185NC_009600GAGG310945810946912 Illicium oligandrum chloroplast
186NC_009601GAGG310469010470112 Dioscorea elephantipes chloroplast
187NC_009618GAGG311106511107612 Cycas taitungensis chloroplast
188NC_009765GAGG3623656237612 Cuscuta gronovii chloroplast
189NC_009766GAGG3934089341912 Cuscuta reflexa chloroplast
190NC_009808GAGG310717710718812 Ipomoea purpurea chloroplast
191NC_009949GAGG3613766138712 Cuscuta obtusiflora chloroplast
192NC_009962GAGG310816210817312 Ceratophyllum demersum chloroplast
193NC_009963GAGG3966059661612 Cuscuta exaltata chloroplast
194NC_010093GAGG310486610487712 Acorus americanus chloroplast
195NC_010109GAGG311130311131412 Lemna minor chloroplast
196NC_010323GAGG311087711088812 Carica papaya chloroplast
197NC_010358GAGG311194211195312 Oenothera argillicola chloroplast
198NC_010359GAGG3832368324712 Aneura mirabilis chloroplast
199NC_010360GAGG311262711263812 Oenothera glazioviana chloroplast
200NC_010361GAGG311209511210612 Oenothera biennis chloroplast
201NC_010362GAGG311076111077212 Oenothera parviflora chloroplast
202NC_010433GAGG311159111160212 Manihot esculenta chloroplast
203NC_010442GAGG310630610631712 Trachelium caeruleum chloroplast
204NC_010601GAGG310483110484212 Guizotia abyssinica chloroplast
205NC_010654GAGG3851248513512 Welwitschia mirabilis chloroplast
206NC_010776GAGG310633510634612 Fagopyrum esculentum subsp. ancestrale chloroplast
207NC_011152GAGG3901629017312 Picea sitchensis chloroplast
208NC_011153GAGG3898048981512 Pinus contorta chloroplast
209NC_011154GAGG3890448905512 Pinus gerardiana chloroplast
210NC_011155GAGG3888598887012 Pinus krempfii chloroplast
211NC_011156GAGG3883558836612 Pinus lambertiana chloroplast
212NC_011158GAGG3885888859912 Pinus monophylla chloroplast
213NC_011159GAGG3891518916212 Pinus nelsonii chloroplast
214NC_011163GAGG310241910243012 Cicer arietinum chloroplast
215NC_011930GAGG3105601057112 Keteleeria davidiana chloroplast
216NC_011942GAGG3251362514712 Gnetum parvifolium chloroplast
217NC_011954GAGG3755797559012 Ephedra equisetina chloroplast
218NC_012099GAGG3715717158212 Pyramimonas parkeae chloroplast
219NC_012224GAGG311340611341712 Jatropha curcas chloroplast
220NC_012615GAGG311056111057212 Megaleranthis saniculifolia chloroplast
221NC_012818GAGG315107215108312 Alsophila spinulosa chloroplast
222NC_013088GAGG3173571736812 Dendrocalamus latiflorus chloroplast
223NC_013553GAGG310593510594612 Parthenium argentatum chloroplast
224NC_013823GAGG311177211178312 Typha latifolia chloroplast
225NC_013843GAGG310365410366512 Vigna radiata chloroplast
226NC_013991GAGG310890410891512 Phoenix dactylifera chloroplast
227NC_014056GAGG310472010473112 Oncidium Gower Ramsey chloroplast
228NC_013707GAGG310797810798912 Olea europaea chloroplast