Chloroplast Motifs - Imperfect TAG Repeats
S.No | Sequence ID | Motif | Iterations | Start | End | Tract Length | Sequence Name |
---|---|---|---|---|---|---|---|
1 | NC_004543 | TAG | 13 | 41845 | 41883 | 39 | Anthoceros formosae chloroplast |
2 | NC_020362 | TAG | 12 | 27632 | 27665 | 34 | Heliconia collinsiana plastid |
3 | NC_013086 | TAG | 11 | 135252 | 135284 | 33 | Selaginella moellendorffii plastid |
4 | NC_020795 | TAG | 6 | 68200 | 68217 | 18 | Chondrus crispus plastid complete genome |
5 | NC_011087 | TAG | 5 | 392821 | 392835 | 15 | Paulinella chromatophora chromatophore |
6 | NC_014573 | TAG | 5 | 142256 | 142269 | 14 | Geranium palmatum plastid |
7 | NC_015359 | TAG | 5 | 119932 | 119946 | 15 | Chlorella variabilis plastid |
8 | NC_015605 | TAG | 5 | 35585 | 35598 | 14 | Nelumbo lutea chloroplast |
9 | NC_015830 | TAG | 5 | 37934 | 37948 | 15 | Bambusa emeiensis chloroplast |
10 | NC_015891 | TAG | 5 | 37304 | 37318 | 15 | Spirodela polyrhiza chloroplast |
11 | NC_016677 | TAG | 5 | 37047 | 37061 | 15 | Leersia tisserantii plastid |
12 | NC_016927 | TAG | 5 | 35758 | 35772 | 15 | Oryza meridionalis chloroplast |
13 | NC_017006 | TAG | 5 | 100301 | 100315 | 15 | Mankyua chejuensis chloroplast |
14 | NC_017835 | TAG | 5 | 35751 | 35765 | 15 | Oryza rufipogon chloroplast |
15 | NC_020362 | TAG | 5 | 40632 | 40647 | 16 | Heliconia collinsiana plastid |
16 | NC_022099 | TAG | 5 | 90012 | 90025 | 14 | Medicago truncatula cultivar Jemalong 2HA plastid |
17 | NC_022100 | TAG | 5 | 89811 | 89824 | 14 | Medicago truncatula cultivar Borung plastid |
18 | NC_001320 | TAG | 5 | 35755 | 35769 | 15 | Oryza sativa Japonica Group plastid |
19 | NC_003119 | TAG | 5 | 90012 | 90025 | 14 | Medicago truncatula chloroplast |
20 | NC_005973 | TAG | 5 | 35689 | 35703 | 15 | Oryza nivara chloroplast |
21 | NC_006861 | TAG | 5 | 85063 | 85077 | 15 | Huperzia lucidula chloroplast |
22 | NC_008155 | TAG | 5 | 35715 | 35729 | 15 | Oryza sativa Indica Group chloroplast |
23 | NC_008829 | TAG | 5 | 84066 | 84080 | 15 | Angiopteris evecta chloroplast |
24 | NC_012927 | TAG | 5 | 37811 | 37825 | 15 | Bambusa oldhamii chloroplast |
25 | NC_013088 | TAG | 5 | 37976 | 37990 | 15 | Dendrocalamus latiflorus chloroplast |
26 | NC_011087 | TAG | 4 | 148961 | 148971 | 11 | Paulinella chromatophora chromatophore |
27 | NC_011087 | TAG | 4 | 205113 | 205124 | 12 | Paulinella chromatophora chromatophore |
28 | NC_011087 | TAG | 4 | 223850 | 223861 | 12 | Paulinella chromatophora chromatophore |
29 | NC_011087 | TAG | 4 | 376431 | 376441 | 11 | Paulinella chromatophora chromatophore |
30 | NC_011087 | TAG | 4 | 389701 | 389711 | 11 | Paulinella chromatophora chromatophore |
31 | NC_011087 | TAG | 4 | 589431 | 589441 | 11 | Paulinella chromatophora chromatophore |
32 | NC_011087 | TAG | 4 | 722672 | 722682 | 11 | Paulinella chromatophora chromatophore |
33 | NC_011087 | TAG | 4 | 850566 | 850577 | 12 | Paulinella chromatophora chromatophore |
34 | NC_011087 | TAG | 4 | 1015465 | 1015476 | 12 | Paulinella chromatophora chromatophore |
35 | NC_014287 | TAG | 4 | 28940 | 28951 | 12 | Durinskia baltica chloroplast |
36 | NC_014570 | TAG | 4 | 15224 | 15234 | 11 | Eucalyptus grandis chloroplast |
37 | NC_014573 | TAG | 4 | 18721 | 18732 | 12 | Geranium palmatum plastid |
38 | NC_014676 | TAG | 4 | 46641 | 46651 | 11 | Theobroma cacao chloroplast |
39 | NC_014874 | TAG | 4 | 4266 | 4276 | 11 | Rhizanthella gardneri plastid |
40 | NC_015113 | TAG | 4 | 13934 | 13944 | 11 | Anthriscus cerefolium chloroplast |
41 | NC_015113 | TAG | 4 | 13953 | 13964 | 12 | Anthriscus cerefolium chloroplast |
42 | NC_015113 | TAG | 4 | 55380 | 55391 | 12 | Anthriscus cerefolium chloroplast |
43 | NC_015204 | TAG | 4 | 46554 | 46564 | 11 | Gossypium thurberi chloroplast |
44 | NC_015605 | TAG | 4 | 30554 | 30565 | 12 | Nelumbo lutea chloroplast |
45 | NC_015605 | TAG | 4 | 64212 | 64223 | 12 | Nelumbo lutea chloroplast |
46 | NC_015605 | TAG | 4 | 136160 | 136171 | 12 | Nelumbo lutea chloroplast |
47 | NC_015610 | TAG | 4 | 64278 | 64289 | 12 | Nelumbo nucifera chloroplast |
48 | NC_015610 | TAG | 4 | 136249 | 136260 | 12 | Nelumbo nucifera chloroplast |
49 | NC_015621 | TAG | 4 | 53769 | 53780 | 12 | Ageratina adenophora chloroplast |
50 | NC_015803 | TAG | 4 | 46091 | 46101 | 11 | Indocalamus longiauritus plastid |
51 | NC_015817 | TAG | 4 | 46027 | 46037 | 11 | Phyllostachys edulis chloroplast |
52 | NC_015826 | TAG | 4 | 45999 | 46009 | 11 | Phyllostachys nigra var. henonis chloroplast |
53 | NC_015983 | TAG | 4 | 62806 | 62816 | 11 | Cucumis melo subsp. melo chloroplast |
54 | NC_015983 | TAG | 4 | 129442 | 129453 | 12 | Cucumis melo subsp. melo chloroplast |
55 | NC_016063 | TAG | 4 | 101543 | 101554 | 12 | Cephalotaxus wilsoniana chloroplast DNA |
56 | NC_016068 | TAG | 4 | 32535 | 32546 | 12 | Nicotiana undulata chloroplast |
57 | NC_016068 | TAG | 4 | 45899 | 45909 | 11 | Nicotiana undulata chloroplast |
58 | NC_016430 | TAG | 4 | 59668 | 59678 | 11 | Eleutherococcus senticosus chloroplast |
59 | NC_016670 | TAG | 4 | 46654 | 46664 | 11 | Gossypium darwinii chloroplast |
60 | NC_016690 | TAG | 4 | 46652 | 46662 | 11 | Gossypium tomentosum chloroplast |
61 | NC_016692 | TAG | 4 | 46556 | 46566 | 11 | Gossypium herbaceum subsp. africanum chloroplast |
62 | NC_016699 | TAG | 4 | 46030 | 46040 | 11 | Phyllostachys propinqua chloroplast |
63 | NC_016703 | TAG | 4 | 29979 | 29990 | 12 | Phaeocystis antarctica strain CCMP1374 plastid |
64 | NC_016711 | TAG | 4 | 46611 | 46621 | 11 | Gossypium mustelinum chloroplast |
65 | NC_016712 | TAG | 4 | 46516 | 46526 | 11 | Gossypium arboreum chloroplast |
66 | NC_016731 | TAG | 4 | 47689 | 47700 | 12 | Synedra acus chloroplast |
67 | NC_016732 | TAG | 4 | 4996 | 5007 | 12 | Dunaliella salina chloroplast |
68 | NC_016732 | TAG | 4 | 38293 | 38304 | 12 | Dunaliella salina chloroplast |
69 | NC_016986 | TAG | 4 | 17493 | 17504 | 12 | Ginkgo biloba chloroplast |
70 | NC_018109 | TAG | 4 | 46026 | 46036 | 11 | Gossypium incanum chloroplast |
71 | NC_018110 | TAG | 4 | 46166 | 46176 | 11 | Gossypium somalense chloroplast |
72 | NC_018111 | TAG | 4 | 46019 | 46029 | 11 | Gossypium capitis-viridis chloroplast |
73 | NC_018112 | TAG | 4 | 46190 | 46200 | 11 | Gossypium areysianum chloroplast |
74 | NC_018113 | TAG | 4 | 46225 | 46235 | 11 | Gossypium robinsonii chloroplast |
75 | NC_018117 | TAG | 4 | 32358 | 32369 | 12 | Datura stramonium chloroplast |
76 | NC_018117 | TAG | 4 | 45699 | 45709 | 11 | Datura stramonium chloroplast |
77 | NC_018523 | TAG | 4 | 31797 | 31808 | 12 | Saccharina japonica chloroplast |
78 | NC_018523 | TAG | 4 | 80994 | 81005 | 12 | Saccharina japonica chloroplast |
79 | NC_018541 | TAG | 4 | 112646 | 112657 | 12 | Elodea canadensis chloroplast |
80 | NC_018541 | TAG | 4 | 112712 | 112723 | 12 | Elodea canadensis chloroplast |
81 | NC_018541 | TAG | 4 | 112745 | 112756 | 12 | Elodea canadensis chloroplast |
82 | NC_018552 | TAG | 4 | 32457 | 32468 | 12 | Capsicum annuum chloroplast |
83 | NC_018552 | TAG | 4 | 45709 | 45719 | 11 | Capsicum annuum chloroplast |
84 | NC_018565 | TAG | 4 | 44060 | 44070 | 11 | Pachycladon enysii chloroplast |
85 | NC_019616 | TAG | 4 | 45299 | 45310 | 12 | Vaccinium macrocarpon plastid |
86 | NC_020319 | TAG | 4 | 73180 | 73191 | 12 | Cycas revoluta chloroplast |
87 | NC_020363 | TAG | 4 | 37919 | 37929 | 11 | Zingiber spectabile plastid |
88 | NC_020367 | TAG | 4 | 56458 | 56469 | 12 | Dasypogon bromeliifolius plastid |
89 | NC_020371 | TAG | 4 | 22451 | 22462 | 12 | Pavlova lutheri chloroplast |
90 | NC_020371 | TAG | 4 | 52558 | 52569 | 12 | Pavlova lutheri chloroplast |
91 | NC_020438 | TAG | 4 | 65005 | 65016 | 12 | Gonium pectorale chloroplast |
92 | NC_020795 | TAG | 4 | 5561 | 5572 | 12 | Chondrus crispus plastid complete genome |
93 | NC_020795 | TAG | 4 | 29733 | 29743 | 11 | Chondrus crispus plastid complete genome |
94 | NC_020795 | TAG | 4 | 133033 | 133043 | 11 | Chondrus crispus plastid complete genome |
95 | NC_020795 | TAG | 4 | 179554 | 179565 | 12 | Chondrus crispus plastid complete genome |
96 | NC_021075 | TAG | 4 | 164631 | 164642 | 12 | Calliarthron tuberculosum chloroplast |
97 | NC_021075 | TAG | 4 | 178580 | 178591 | 12 | Calliarthron tuberculosum chloroplast |
98 | NC_021101 | TAG | 4 | 56052 | 56063 | 12 | Francoa sonchifolia plastid |
99 | NC_021102 | TAG | 4 | 43615 | 43625 | 11 | Pachycladon cheesemanii chloroplast |
100 | NC_021110 | TAG | 4 | 100478 | 100489 | 12 | Cephalotaxus oliveri chloroplast |
101 | NC_021189 | TAG | 4 | 43002 | 43012 | 11 | Pyropia haitanensis voucher PH-38 chloroplast |
102 | NC_021189 | TAG | 4 | 113088 | 113099 | 12 | Pyropia haitanensis voucher PH-38 chloroplast |
103 | NC_021429 | TAG | 4 | 32076 | 32086 | 11 | Cymbidium aloifolium voucher KUN:YJB100604 chloroplast |
104 | NC_021433 | TAG | 4 | 31982 | 31992 | 11 | Cymbidium mannii voucher KUN:YJB100602 chloroplast |
105 | NC_021449 | TAG | 4 | 55479 | 55490 | 12 | Utricularia gibba chloroplast |
106 | NC_021618 | TAG | 4 | 75568 | 75578 | 11 | Grateloupia taiwanensis plastid |
107 | NC_021645 | TAG | 4 | 10038 | 10050 | 13 | Glycine cyrtoloba voucher CSIRO:G1267 chloroplast |
108 | NC_021646 | TAG | 4 | 10017 | 10029 | 13 | Glycine stenophita voucher CSIRO:G1974 chloroplast |
109 | NC_021649 | TAG | 4 | 47095 | 47106 | 12 | Glycine falcata voucher CSIRO:G1718 chloroplast |
110 | NC_022099 | TAG | 4 | 76711 | 76721 | 11 | Medicago truncatula cultivar Jemalong 2HA plastid |
111 | NC_022100 | TAG | 4 | 76513 | 76523 | 11 | Medicago truncatula cultivar Borung plastid |
112 | NC_000925 | TAG | 4 | 162580 | 162590 | 11 | Porphyra purpurea chloroplast |
113 | NC_000927 | TAG | 4 | 151260 | 151271 | 12 | Nephroselmis olivacea chloroplast |
114 | NC_000932 | TAG | 4 | 44230 | 44240 | 11 | Arabidopsis thaliana chloroplast |
115 | NC_001568 | TAG | 4 | 2865 | 2876 | 12 | Epifagus virginiana chloroplast |
116 | NC_001603 | TAG | 4 | 7673 | 7683 | 11 | Euglena gracilis chloroplast |
117 | NC_001603 | TAG | 4 | 25787 | 25798 | 12 | Euglena gracilis chloroplast |
118 | NC_001879 | TAG | 4 | 32505 | 32516 | 12 | Nicotiana tabacum plastid |
119 | NC_001879 | TAG | 4 | 45888 | 45898 | 11 | Nicotiana tabacum plastid |
120 | NC_002186 | TAG | 4 | 48343 | 48353 | 11 | Mesostigma viride chloroplast |
121 | NC_002694 | TAG | 4 | 46422 | 46433 | 12 | Lotus japonicus chloroplast |
122 | NC_003119 | TAG | 4 | 76711 | 76721 | 11 | Medicago truncatula chloroplast |
123 | NC_003386 | TAG | 4 | 34029 | 34040 | 12 | Psilotum nudum chloroplast |
124 | NC_003386 | TAG | 4 | 74253 | 74264 | 12 | Psilotum nudum chloroplast |
125 | NC_003386 | TAG | 4 | 124521 | 124533 | 13 | Psilotum nudum chloroplast |
126 | NC_004115 | TAG | 4 | 48641 | 48652 | 12 | Chaetosphaeridium globosum chloroplast |
127 | NC_004543 | TAG | 4 | 138089 | 138099 | 11 | Anthoceros formosae chloroplast |
128 | NC_004561 | TAG | 4 | 45648 | 45658 | 11 | Atropa belladonna chloroplast |
129 | NC_004766 | TAG | 4 | 42521 | 42533 | 13 | Adiantum capillus-veneris chloroplast |
130 | NC_006050 | TAG | 4 | 35851 | 35861 | 11 | Nymphaea alba chloroplast |
131 | NC_006290 | TAG | 4 | 59217 | 59227 | 11 | Panax ginseng chloroplast |
132 | NC_006861 | TAG | 4 | 48528 | 48539 | 12 | Huperzia lucidula chloroplast |
133 | NC_006861 | TAG | 4 | 134689 | 134700 | 12 | Huperzia lucidula chloroplast |
134 | NC_007144 | TAG | 4 | 13586 | 13596 | 11 | Cucumis sativus chloroplast |
135 | NC_007144 | TAG | 4 | 63338 | 63348 | 11 | Cucumis sativus chloroplast |
136 | NC_007500 | TAG | 4 | 32502 | 32513 | 12 | Nicotiana sylvestris chloroplast |
137 | NC_007500 | TAG | 4 | 45885 | 45895 | 11 | Nicotiana sylvestris chloroplast |
138 | NC_007602 | TAG | 4 | 32449 | 32460 | 12 | Nicotiana tomentosiformis chloroplast |
139 | NC_007898 | TAG | 4 | 32093 | 32104 | 12 | Solanum lycopersicum chloroplast |
140 | NC_007898 | TAG | 4 | 44944 | 44954 | 11 | Solanum lycopersicum chloroplast |
141 | NC_007943 | TAG | 4 | 32113 | 32124 | 12 | Solanum bulbocastanum chloroplast |
142 | NC_007943 | TAG | 4 | 44970 | 44980 | 11 | Solanum bulbocastanum chloroplast |
143 | NC_007944 | TAG | 4 | 46579 | 46589 | 11 | Gossypium hirsutum chloroplast |
144 | NC_007957 | TAG | 4 | 45922 | 45933 | 12 | Vitis vinifera chloroplast |
145 | NC_007977 | TAG | 4 | 53763 | 53774 | 12 | Helianthus annuus chloroplast |
146 | NC_008096 | TAG | 4 | 32234 | 32245 | 12 | Solanum tuberosum chloroplast |
147 | NC_008096 | TAG | 4 | 45089 | 45099 | 11 | Solanum tuberosum chloroplast |
148 | NC_008097 | TAG | 4 | 28696 | 28707 | 12 | Chara vulgaris chloroplast |
149 | NC_008097 | TAG | 4 | 31518 | 31528 | 11 | Chara vulgaris chloroplast |
150 | NC_008100 | TAG | 4 | 9209 | 9220 | 12 | Helicosporidium sp. ex Simulium jonesii plastid |
151 | NC_008114 | TAG | 4 | 140088 | 140098 | 11 | Pseudendoclonium akinetum chloroplast |
152 | NC_008115 | TAG | 4 | 15322 | 15332 | 11 | Eucalyptus globulus subsp. globulus chloroplast |
153 | NC_008116 | TAG | 4 | 23471 | 23481 | 11 | Staurastrum punctulatum chloroplast |
154 | NC_008117 | TAG | 4 | 64590 | 64601 | 12 | Zygnema circumcarinatum chloroplast |
155 | NC_008325 | TAG | 4 | 13948 | 13958 | 11 | Daucus carota chloroplast |
156 | NC_008326 | TAG | 4 | 57891 | 57902 | 12 | Liriodendron tulipifera chloroplast |
157 | NC_008334 | TAG | 4 | 29613 | 29624 | 12 | Citrus sinensis chloroplast |
158 | NC_008335 | TAG | 4 | 30468 | 30479 | 12 | Platanus occidentalis chloroplast |
159 | NC_008359 | TAG | 4 | 56721 | 56732 | 12 | Morus indica chloroplast |
160 | NC_008454 | TAG | 4 | 159654 | 159664 | 11 | Pelargonium x hortorum chloroplast |
161 | NC_008641 | TAG | 4 | 46630 | 46640 | 11 | Gossypium barbadense chloroplast |
162 | NC_008788 | TAG | 4 | 131912 | 131923 | 12 | Nuphar advena chloroplast |
163 | NC_008822 | TAG | 4 | 77899 | 77910 | 12 | Chlorokybus atmophyticus chloroplast |
164 | NC_008822 | TAG | 4 | 103915 | 103926 | 12 | Chlorokybus atmophyticus chloroplast |
165 | NC_009259 | TAG | 4 | 23485 | 23496 | 12 | Phaseolus vulgaris chloroplast |
166 | NC_009265 | TAG | 4 | 43639 | 43649 | 11 | Aethionema cordifolium chloroplast |
167 | NC_009266 | TAG | 4 | 43680 | 43690 | 11 | Aethionema grandiflorum chloroplast |
168 | NC_009267 | TAG | 4 | 43856 | 43866 | 11 | Olimarabidopsis pumila chloroplast |
169 | NC_009268 | TAG | 4 | 43464 | 43474 | 11 | Arabis hirsuta chloroplast |
170 | NC_009269 | TAG | 4 | 44071 | 44081 | 11 | Barbarea verna chloroplast |
171 | NC_009271 | TAG | 4 | 43817 | 43827 | 11 | Crucihimalaya wallichii chloroplast |
172 | NC_009273 | TAG | 4 | 43888 | 43898 | 11 | Lepidium virginicum chloroplast |
173 | NC_009274 | TAG | 4 | 42784 | 42794 | 11 | Lobularia maritima chloroplast |
174 | NC_009275 | TAG | 4 | 43890 | 43900 | 11 | Nasturtium officinale chloroplast |
175 | NC_009573 | TAG | 4 | 69766 | 69776 | 11 | Rhodomonas salina chloroplast |
176 | NC_009573 | TAG | 4 | 70379 | 70390 | 12 | Rhodomonas salina chloroplast |
177 | NC_009573 | TAG | 4 | 79395 | 79406 | 12 | Rhodomonas salina chloroplast |
178 | NC_009599 | TAG | 4 | 5034 | 5045 | 12 | Buxus microphylla chloroplast |
179 | NC_009599 | TAG | 4 | 29418 | 29429 | 12 | Buxus microphylla chloroplast |
180 | NC_009681 | TAG | 4 | 111038 | 111050 | 13 | Leptosira terrestris chloroplast |
181 | NC_009765 | TAG | 4 | 51657 | 51668 | 12 | Cuscuta gronovii chloroplast |
182 | NC_009765 | TAG | 4 | 60764 | 60774 | 11 | Cuscuta gronovii chloroplast |
183 | NC_009808 | TAG | 4 | 137910 | 137921 | 12 | Ipomoea purpurea chloroplast |
184 | NC_009949 | TAG | 4 | 50886 | 50897 | 12 | Cuscuta obtusiflora chloroplast |
185 | NC_009949 | TAG | 4 | 59755 | 59765 | 11 | Cuscuta obtusiflora chloroplast |
186 | NC_010323 | TAG | 4 | 13521 | 13531 | 11 | Carica papaya chloroplast |
187 | NC_010601 | TAG | 4 | 53828 | 53839 | 12 | Guizotia abyssinica chloroplast |
188 | NC_010776 | TAG | 4 | 55243 | 55254 | 12 | Fagopyrum esculentum subsp. ancestrale chloroplast |
189 | NC_010776 | TAG | 4 | 64268 | 64278 | 11 | Fagopyrum esculentum subsp. ancestrale chloroplast |
190 | NC_011031 | TAG | 4 | 177496 | 177507 | 12 | Oedogonium cardiacum chloroplast |
191 | NC_011032 | TAG | 4 | 17246 | 17257 | 12 | Brachypodium distachyon chloroplast |
192 | NC_011600 | TAG | 4 | 101769 | 101780 | 12 | Vaucheria litorea chloroplast |
193 | NC_011828 | TAG | 4 | 29634 | 29644 | 11 | Trifolium subterraneum chloroplast |
194 | NC_011942 | TAG | 4 | 896 | 907 | 12 | Gnetum parvifolium chloroplast |
195 | NC_012097 | TAG | 4 | 28802 | 28813 | 12 | Pycnococcus provasolii chloroplast |
196 | NC_012818 | TAG | 4 | 36898 | 36908 | 11 | Alsophila spinulosa chloroplast |
197 | NC_012898 | TAG | 4 | 46699 | 46709 | 11 | Aureococcus anophagefferens chloroplast |
198 | NC_012898 | TAG | 4 | 49595 | 49606 | 12 | Aureococcus anophagefferens chloroplast |
199 | NC_013359 | TAG | 4 | 57872 | 57883 | 12 | Bryopsis hypnoides chloroplast |
200 | NC_013553 | TAG | 4 | 54505 | 54516 | 12 | Parthenium argentatum chloroplast |
201 | NC_013703 | TAG | 4 | 35120 | 35131 | 12 | Cryptomonas paramecium plastid |
202 | NC_013823 | TAG | 4 | 57920 | 57931 | 12 | Typha latifolia chloroplast |
203 | NC_014057 | TAG | 4 | 80155 | 80165 | 11 | Pisum sativum chloroplast |
204 | NC_014063 | TAG | 4 | 9852 | 9863 | 12 | Lathyrus sativus chloroplast |