ChloroMitoSSRDB 2.0 Webserver cum Database of Cholorplast and Mitochondrial Microsatellites

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Chloroplast Motifs - Imperfect TAG Repeats

S.NoSequence IDMotifIterationsStartEndTract LengthSequence Name
1NC_004543TAG13418454188339 Anthoceros formosae chloroplast
2NC_020362TAG12276322766534Heliconia collinsiana plastid
3NC_013086TAG1113525213528433 Selaginella moellendorffii plastid
4NC_020795TAG6682006821718Chondrus crispus plastid complete genome
5NC_011087TAG539282139283515Paulinella chromatophora chromatophore
6NC_014573TAG514225614226914Geranium palmatum plastid
7NC_015359TAG511993211994615Chlorella variabilis plastid
8NC_015605TAG5355853559814Nelumbo lutea chloroplast
9NC_015830TAG5379343794815Bambusa emeiensis chloroplast
10NC_015891TAG5373043731815Spirodela polyrhiza chloroplast
11NC_016677TAG5370473706115Leersia tisserantii plastid
12NC_016927TAG5357583577215Oryza meridionalis chloroplast
13NC_017006TAG510030110031515Mankyua chejuensis chloroplast
14NC_017835TAG5357513576515Oryza rufipogon chloroplast
15NC_020362TAG5406324064716Heliconia collinsiana plastid
16NC_022099TAG5900129002514Medicago truncatula cultivar Jemalong 2HA plastid
17NC_022100TAG5898118982414Medicago truncatula cultivar Borung plastid
18NC_001320TAG5357553576915 Oryza sativa Japonica Group plastid
19NC_003119TAG5900129002514 Medicago truncatula chloroplast
20NC_005973TAG5356893570315 Oryza nivara chloroplast
21NC_006861TAG5850638507715 Huperzia lucidula chloroplast
22NC_008155TAG5357153572915 Oryza sativa Indica Group chloroplast
23NC_008829TAG5840668408015 Angiopteris evecta chloroplast
24NC_012927TAG5378113782515 Bambusa oldhamii chloroplast
25NC_013088TAG5379763799015 Dendrocalamus latiflorus chloroplast
26NC_011087TAG414896114897111Paulinella chromatophora chromatophore
27NC_011087TAG420511320512412Paulinella chromatophora chromatophore
28NC_011087TAG422385022386112Paulinella chromatophora chromatophore
29NC_011087TAG437643137644111Paulinella chromatophora chromatophore
30NC_011087TAG438970138971111Paulinella chromatophora chromatophore
31NC_011087TAG458943158944111Paulinella chromatophora chromatophore
32NC_011087TAG472267272268211Paulinella chromatophora chromatophore
33NC_011087TAG485056685057712Paulinella chromatophora chromatophore
34NC_011087TAG41015465101547612Paulinella chromatophora chromatophore
35NC_014287TAG4289402895112Durinskia baltica chloroplast
36NC_014570TAG4152241523411Eucalyptus grandis chloroplast
37NC_014573TAG4187211873212Geranium palmatum plastid
38NC_014676TAG4466414665111Theobroma cacao chloroplast
39NC_014874TAG44266427611Rhizanthella gardneri plastid
40NC_015113TAG4139341394411Anthriscus cerefolium chloroplast
41NC_015113TAG4139531396412Anthriscus cerefolium chloroplast
42NC_015113TAG4553805539112Anthriscus cerefolium chloroplast
43NC_015204TAG4465544656411Gossypium thurberi chloroplast
44NC_015605TAG4305543056512Nelumbo lutea chloroplast
45NC_015605TAG4642126422312Nelumbo lutea chloroplast
46NC_015605TAG413616013617112Nelumbo lutea chloroplast
47NC_015610TAG4642786428912Nelumbo nucifera chloroplast
48NC_015610TAG413624913626012Nelumbo nucifera chloroplast
49NC_015621TAG4537695378012Ageratina adenophora chloroplast
50NC_015803TAG4460914610111Indocalamus longiauritus plastid
51NC_015817TAG4460274603711Phyllostachys edulis chloroplast
52NC_015826TAG4459994600911Phyllostachys nigra var. henonis chloroplast
53NC_015983TAG4628066281611Cucumis melo subsp. melo chloroplast
54NC_015983TAG412944212945312Cucumis melo subsp. melo chloroplast
55NC_016063TAG410154310155412Cephalotaxus wilsoniana chloroplast DNA
56NC_016068TAG4325353254612Nicotiana undulata chloroplast
57NC_016068TAG4458994590911Nicotiana undulata chloroplast
58NC_016430TAG4596685967811Eleutherococcus senticosus chloroplast
59NC_016670TAG4466544666411Gossypium darwinii chloroplast
60NC_016690TAG4466524666211Gossypium tomentosum chloroplast
61NC_016692TAG4465564656611Gossypium herbaceum subsp. africanum chloroplast
62NC_016699TAG4460304604011Phyllostachys propinqua chloroplast
63NC_016703TAG4299792999012Phaeocystis antarctica strain CCMP1374 plastid
64NC_016711TAG4466114662111Gossypium mustelinum chloroplast
65NC_016712TAG4465164652611Gossypium arboreum chloroplast
66NC_016731TAG4476894770012Synedra acus chloroplast
67NC_016732TAG44996500712Dunaliella salina chloroplast
68NC_016732TAG4382933830412Dunaliella salina chloroplast
69NC_016986TAG4174931750412Ginkgo biloba chloroplast
70NC_018109TAG4460264603611Gossypium incanum chloroplast
71NC_018110TAG4461664617611Gossypium somalense chloroplast
72NC_018111TAG4460194602911Gossypium capitis-viridis chloroplast
73NC_018112TAG4461904620011Gossypium areysianum chloroplast
74NC_018113TAG4462254623511Gossypium robinsonii chloroplast
75NC_018117TAG4323583236912Datura stramonium chloroplast
76NC_018117TAG4456994570911Datura stramonium chloroplast
77NC_018523TAG4317973180812Saccharina japonica chloroplast
78NC_018523TAG4809948100512Saccharina japonica chloroplast
79NC_018541TAG411264611265712Elodea canadensis chloroplast
80NC_018541TAG411271211272312Elodea canadensis chloroplast
81NC_018541TAG411274511275612Elodea canadensis chloroplast
82NC_018552TAG4324573246812Capsicum annuum chloroplast
83NC_018552TAG4457094571911Capsicum annuum chloroplast
84NC_018565TAG4440604407011Pachycladon enysii chloroplast
85NC_019616TAG4452994531012Vaccinium macrocarpon plastid
86NC_020319TAG4731807319112Cycas revoluta chloroplast
87NC_020363TAG4379193792911Zingiber spectabile plastid
88NC_020367TAG4564585646912Dasypogon bromeliifolius plastid
89NC_020371TAG4224512246212Pavlova lutheri chloroplast
90NC_020371TAG4525585256912Pavlova lutheri chloroplast
91NC_020438TAG4650056501612Gonium pectorale chloroplast
92NC_020795TAG45561557212Chondrus crispus plastid complete genome
93NC_020795TAG4297332974311Chondrus crispus plastid complete genome
94NC_020795TAG413303313304311Chondrus crispus plastid complete genome
95NC_020795TAG417955417956512Chondrus crispus plastid complete genome
96NC_021075TAG416463116464212Calliarthron tuberculosum chloroplast
97NC_021075TAG417858017859112Calliarthron tuberculosum chloroplast
98NC_021101TAG4560525606312Francoa sonchifolia plastid
99NC_021102TAG4436154362511Pachycladon cheesemanii chloroplast
100NC_021110TAG410047810048912Cephalotaxus oliveri chloroplast
101NC_021189TAG4430024301211Pyropia haitanensis voucher PH-38 chloroplast
102NC_021189TAG411308811309912Pyropia haitanensis voucher PH-38 chloroplast
103NC_021429TAG4320763208611Cymbidium aloifolium voucher KUN:YJB100604 chloroplast
104NC_021433TAG4319823199211Cymbidium mannii voucher KUN:YJB100602 chloroplast
105NC_021449TAG4554795549012Utricularia gibba chloroplast
106NC_021618TAG4755687557811Grateloupia taiwanensis plastid
107NC_021645TAG4100381005013Glycine cyrtoloba voucher CSIRO:G1267 chloroplast
108NC_021646TAG4100171002913Glycine stenophita voucher CSIRO:G1974 chloroplast
109NC_021649TAG4470954710612Glycine falcata voucher CSIRO:G1718 chloroplast
110NC_022099TAG4767117672111Medicago truncatula cultivar Jemalong 2HA plastid
111NC_022100TAG4765137652311Medicago truncatula cultivar Borung plastid
112NC_000925TAG416258016259011 Porphyra purpurea chloroplast
113NC_000927TAG415126015127112 Nephroselmis olivacea chloroplast
114NC_000932TAG4442304424011 Arabidopsis thaliana chloroplast
115NC_001568TAG42865287612 Epifagus virginiana chloroplast
116NC_001603TAG47673768311 Euglena gracilis chloroplast
117NC_001603TAG4257872579812 Euglena gracilis chloroplast
118NC_001879TAG4325053251612 Nicotiana tabacum plastid
119NC_001879TAG4458884589811 Nicotiana tabacum plastid
120NC_002186TAG4483434835311 Mesostigma viride chloroplast
121NC_002694TAG4464224643312 Lotus japonicus chloroplast
122NC_003119TAG4767117672111 Medicago truncatula chloroplast
123NC_003386TAG4340293404012 Psilotum nudum chloroplast
124NC_003386TAG4742537426412 Psilotum nudum chloroplast
125NC_003386TAG412452112453313 Psilotum nudum chloroplast
126NC_004115TAG4486414865212 Chaetosphaeridium globosum chloroplast
127NC_004543TAG413808913809911 Anthoceros formosae chloroplast
128NC_004561TAG4456484565811 Atropa belladonna chloroplast
129NC_004766TAG4425214253313 Adiantum capillus-veneris chloroplast
130NC_006050TAG4358513586111 Nymphaea alba chloroplast
131NC_006290TAG4592175922711 Panax ginseng chloroplast
132NC_006861TAG4485284853912 Huperzia lucidula chloroplast
133NC_006861TAG413468913470012 Huperzia lucidula chloroplast
134NC_007144TAG4135861359611 Cucumis sativus chloroplast
135NC_007144TAG4633386334811 Cucumis sativus chloroplast
136NC_007500TAG4325023251312 Nicotiana sylvestris chloroplast
137NC_007500TAG4458854589511 Nicotiana sylvestris chloroplast
138NC_007602TAG4324493246012 Nicotiana tomentosiformis chloroplast
139NC_007898TAG4320933210412 Solanum lycopersicum chloroplast
140NC_007898TAG4449444495411 Solanum lycopersicum chloroplast
141NC_007943TAG4321133212412 Solanum bulbocastanum chloroplast
142NC_007943TAG4449704498011 Solanum bulbocastanum chloroplast
143NC_007944TAG4465794658911 Gossypium hirsutum chloroplast
144NC_007957TAG4459224593312 Vitis vinifera chloroplast
145NC_007977TAG4537635377412 Helianthus annuus chloroplast
146NC_008096TAG4322343224512 Solanum tuberosum chloroplast
147NC_008096TAG4450894509911 Solanum tuberosum chloroplast
148NC_008097TAG4286962870712 Chara vulgaris chloroplast
149NC_008097TAG4315183152811 Chara vulgaris chloroplast
150NC_008100TAG49209922012 Helicosporidium sp. ex Simulium jonesii plastid
151NC_008114TAG414008814009811 Pseudendoclonium akinetum chloroplast
152NC_008115TAG4153221533211 Eucalyptus globulus subsp. globulus chloroplast
153NC_008116TAG4234712348111 Staurastrum punctulatum chloroplast
154NC_008117TAG4645906460112 Zygnema circumcarinatum chloroplast
155NC_008325TAG4139481395811 Daucus carota chloroplast
156NC_008326TAG4578915790212 Liriodendron tulipifera chloroplast
157NC_008334TAG4296132962412 Citrus sinensis chloroplast
158NC_008335TAG4304683047912 Platanus occidentalis chloroplast
159NC_008359TAG4567215673212 Morus indica chloroplast
160NC_008454TAG415965415966411 Pelargonium x hortorum chloroplast
161NC_008641TAG4466304664011 Gossypium barbadense chloroplast
162NC_008788TAG413191213192312 Nuphar advena chloroplast
163NC_008822TAG4778997791012 Chlorokybus atmophyticus chloroplast
164NC_008822TAG410391510392612 Chlorokybus atmophyticus chloroplast
165NC_009259TAG4234852349612 Phaseolus vulgaris chloroplast
166NC_009265TAG4436394364911 Aethionema cordifolium chloroplast
167NC_009266TAG4436804369011 Aethionema grandiflorum chloroplast
168NC_009267TAG4438564386611 Olimarabidopsis pumila chloroplast
169NC_009268TAG4434644347411 Arabis hirsuta chloroplast
170NC_009269TAG4440714408111 Barbarea verna chloroplast
171NC_009271TAG4438174382711 Crucihimalaya wallichii chloroplast
172NC_009273TAG4438884389811 Lepidium virginicum chloroplast
173NC_009274TAG4427844279411 Lobularia maritima chloroplast
174NC_009275TAG4438904390011 Nasturtium officinale chloroplast
175NC_009573TAG4697666977611 Rhodomonas salina chloroplast
176NC_009573TAG4703797039012 Rhodomonas salina chloroplast
177NC_009573TAG4793957940612 Rhodomonas salina chloroplast
178NC_009599TAG45034504512 Buxus microphylla chloroplast
179NC_009599TAG4294182942912 Buxus microphylla chloroplast
180NC_009681TAG411103811105013 Leptosira terrestris chloroplast
181NC_009765TAG4516575166812 Cuscuta gronovii chloroplast
182NC_009765TAG4607646077411 Cuscuta gronovii chloroplast
183NC_009808TAG413791013792112 Ipomoea purpurea chloroplast
184NC_009949TAG4508865089712 Cuscuta obtusiflora chloroplast
185NC_009949TAG4597555976511 Cuscuta obtusiflora chloroplast
186NC_010323TAG4135211353111 Carica papaya chloroplast
187NC_010601TAG4538285383912 Guizotia abyssinica chloroplast
188NC_010776TAG4552435525412 Fagopyrum esculentum subsp. ancestrale chloroplast
189NC_010776TAG4642686427811 Fagopyrum esculentum subsp. ancestrale chloroplast
190NC_011031TAG417749617750712 Oedogonium cardiacum chloroplast
191NC_011032TAG4172461725712 Brachypodium distachyon chloroplast
192NC_011600TAG410176910178012 Vaucheria litorea chloroplast
193NC_011828TAG4296342964411 Trifolium subterraneum chloroplast
194NC_011942TAG489690712 Gnetum parvifolium chloroplast
195NC_012097TAG4288022881312 Pycnococcus provasolii chloroplast
196NC_012818TAG4368983690811 Alsophila spinulosa chloroplast
197NC_012898TAG4466994670911 Aureococcus anophagefferens chloroplast
198NC_012898TAG4495954960612 Aureococcus anophagefferens chloroplast
199NC_013359TAG4578725788312 Bryopsis hypnoides chloroplast
200NC_013553TAG4545055451612 Parthenium argentatum chloroplast
201NC_013703TAG4351203513112 Cryptomonas paramecium plastid
202NC_013823TAG4579205793112 Typha latifolia chloroplast
203NC_014057TAG4801558016511 Pisum sativum chloroplast
204NC_014063TAG49852986312 Lathyrus sativus chloroplast