ChloroMitoSSRDB 2.0 Webserver cum Database of Cholorplast and Mitochondrial Microsatellites

Back To Motif Summary

Chloroplast Motifs - Imperfect TTGAA Repeats

S.NoSequence IDMotifIterationsStartEndTract LengthSequence Name
1NC_014287TTGAA4338663388419Durinskia baltica chloroplast
2NC_014340TTGAA45082510019Chromera velia strain CCMP2878 chloroplast
3NC_021109TTGAA41895191319Pleodorina starrii plastid
4NC_016731TTGAA4331903320819Synedra acus chloroplast
5NC_012903TTGAA4814068142419 Aureoumbra lagunensis chloroplast
6NC_016986TTGAA4714487146619Ginkgo biloba chloroplast
7NC_008454TTGAA320987020988415 Pelargonium x hortorum chloroplast
8NC_008590TTGAA3589925900615 Hordeum vulgare subsp. vulgare chloroplast
9NC_008336TTGAA3543045431714 Nandina domestica chloroplast
10NC_008155TTGAA3635776359115 Oryza sativa Indica Group chloroplast
11NC_006084TTGAA3660876610115 Saccharum hybrid cultivar NCo 310 chloroplast
12NC_006050TTGAA3398033981614 Nymphaea alba chloroplast
13NC_005973TTGAA3635566357015 Oryza nivara chloroplast
14NC_005878TTGAA312771412772815 Saccharum hybrid cultivar SP-80-3280 chloroplast
15NC_005087TTGAA3692686928114 Physcomitrella patens subsp. patens chloroplast
16NC_001666TTGAA3654446545815 Zea mays chloroplast
17NC_001320TTGAA3636236363715 Oryza sativa Japonica Group plastid
18NC_021372TTGAA3667736678715Pharus latifolius chloroplast
19NC_021372TTGAA3614366145015Pharus latifolius chloroplast
20NC_020366TTGAA3680166803015Bismarckia nobilis plastid
21NC_020365TTGAA3686966871015Calamus caryotoides plastid
22NC_020365TTGAA3671066712015Calamus caryotoides plastid
23NC_020364TTGAA3674836749715Pseudophoenix vinifera plastid
24NC_010776TTGAA3182151822814 Fagopyrum esculentum subsp. ancestrale chloroplast
25NC_014062TTGAA3655826559615 Anomochloa marantoidea chloroplast
26NC_013991TTGAA3677966781015 Phoenix dactylifera chloroplast
27NC_013823TTGAA3647046471714 Typha latifolia chloroplast
28NC_013273TTGAA3658506586415 Coix lacryma-jobi chloroplast
29NC_013088TTGAA3658456585915 Dendrocalamus latiflorus chloroplast
30NC_013088TTGAA3604826049615 Dendrocalamus latiflorus chloroplast
31NC_012927TTGAA3657386575215 Bambusa oldhamii chloroplast
32NC_012927TTGAA3603626037615 Bambusa oldhamii chloroplast
33NC_011713TTGAA3584615847515 Festuca arundinacea chloroplast
34NC_008589TTGAA3244902450314 Thalassiosira pseudonana chloroplast
35NC_009950TTGAA3579295794315 Lolium perenne chloroplast
36NC_009808TTGAA37227724115 Ipomoea purpurea chloroplast
37NC_009601TTGAA3646026461615 Dioscorea elephantipes chloroplast
38NC_009600TTGAA3699416995515 Illicium oligandrum chloroplast
39NC_009573TTGAA325026314 Rhodomonas salina chloroplast
40NC_009274TTGAA3635656357814 Lobularia maritima chloroplast
41NC_008602TTGAA3662966631015 Sorghum bicolor chloroplast
42NC_020341TTGAA3607286074215Arundinaria gigantea chloroplast
43NC_015820TTGAA3607996081315Acidosasa purpurea chloroplast
44NC_015990TTGAA3647966481015Panicum virgatum chloroplast
45NC_015831TTGAA3658386585215Ferrocalamus rimosivaginus plastid
46NC_015831TTGAA3604756048915Ferrocalamus rimosivaginus plastid
47NC_015830TTGAA3658446585815Bambusa emeiensis chloroplast
48NC_015830TTGAA3604676048115Bambusa emeiensis chloroplast
49NC_015826TTGAA3660916610515Phyllostachys nigra var. henonis chloroplast
50NC_015826TTGAA3607556076915Phyllostachys nigra var. henonis chloroplast
51NC_015820TTGAA3661356614915Acidosasa purpurea chloroplast
52NC_015817TTGAA3660826609615Phyllostachys edulis chloroplast
53NC_015817TTGAA3607466076015Phyllostachys edulis chloroplast
54NC_015803TTGAA3661296614315Indocalamus longiauritus plastid
55NC_015803TTGAA3607936080715Indocalamus longiauritus plastid
56NC_017602TTGAA3667066672015Elaeis guineensis chloroplast
57NC_020341TTGAA3654726548615Arundinaria gigantea chloroplast
58NC_019651TTGAA3578465786015Lolium multiflorum plastid
59NC_019650TTGAA3579065792015Festuca pratensis plastid
60NC_019649TTGAA3564525646615Festuca ovina plastid
61NC_019648TTGAA3578755788915Festuca altissima plastid
62NC_018541TTGAA3674286744215Elodea canadensis chloroplast
63NC_017835TTGAA3636216363515Oryza rufipogon chloroplast
64NC_020362TTGAA3714317144515Heliconia collinsiana plastid
65NC_016927TTGAA3636346364815Oryza meridionalis chloroplast
66NC_016730TTGAA3344043441714Silene latifolia chloroplast
67NC_016718TTGAA3649846499815Rhynchoryza subulata plastid
68NC_016699TTGAA3660876610115Phyllostachys propinqua chloroplast
69NC_016699TTGAA3607506076415Phyllostachys propinqua chloroplast
70NC_016677TTGAA3649976501115Leersia tisserantii plastid