Chloroplast Motifs - Imperfect TTGAA Repeats
S.No | Sequence ID | Motif | Iterations | Start | End | Tract Length | Sequence Name |
---|---|---|---|---|---|---|---|
1 | NC_014287 | TTGAA | 4 | 33866 | 33884 | 19 | Durinskia baltica chloroplast |
2 | NC_014340 | TTGAA | 4 | 5082 | 5100 | 19 | Chromera velia strain CCMP2878 chloroplast |
3 | NC_021109 | TTGAA | 4 | 1895 | 1913 | 19 | Pleodorina starrii plastid |
4 | NC_016731 | TTGAA | 4 | 33190 | 33208 | 19 | Synedra acus chloroplast |
5 | NC_012903 | TTGAA | 4 | 81406 | 81424 | 19 | Aureoumbra lagunensis chloroplast |
6 | NC_016986 | TTGAA | 4 | 71448 | 71466 | 19 | Ginkgo biloba chloroplast |
7 | NC_008454 | TTGAA | 3 | 209870 | 209884 | 15 | Pelargonium x hortorum chloroplast |
8 | NC_008590 | TTGAA | 3 | 58992 | 59006 | 15 | Hordeum vulgare subsp. vulgare chloroplast |
9 | NC_008336 | TTGAA | 3 | 54304 | 54317 | 14 | Nandina domestica chloroplast |
10 | NC_008155 | TTGAA | 3 | 63577 | 63591 | 15 | Oryza sativa Indica Group chloroplast |
11 | NC_006084 | TTGAA | 3 | 66087 | 66101 | 15 | Saccharum hybrid cultivar NCo 310 chloroplast |
12 | NC_006050 | TTGAA | 3 | 39803 | 39816 | 14 | Nymphaea alba chloroplast |
13 | NC_005973 | TTGAA | 3 | 63556 | 63570 | 15 | Oryza nivara chloroplast |
14 | NC_005878 | TTGAA | 3 | 127714 | 127728 | 15 | Saccharum hybrid cultivar SP-80-3280 chloroplast |
15 | NC_005087 | TTGAA | 3 | 69268 | 69281 | 14 | Physcomitrella patens subsp. patens chloroplast |
16 | NC_001666 | TTGAA | 3 | 65444 | 65458 | 15 | Zea mays chloroplast |
17 | NC_001320 | TTGAA | 3 | 63623 | 63637 | 15 | Oryza sativa Japonica Group plastid |
18 | NC_021372 | TTGAA | 3 | 66773 | 66787 | 15 | Pharus latifolius chloroplast |
19 | NC_021372 | TTGAA | 3 | 61436 | 61450 | 15 | Pharus latifolius chloroplast |
20 | NC_020366 | TTGAA | 3 | 68016 | 68030 | 15 | Bismarckia nobilis plastid |
21 | NC_020365 | TTGAA | 3 | 68696 | 68710 | 15 | Calamus caryotoides plastid |
22 | NC_020365 | TTGAA | 3 | 67106 | 67120 | 15 | Calamus caryotoides plastid |
23 | NC_020364 | TTGAA | 3 | 67483 | 67497 | 15 | Pseudophoenix vinifera plastid |
24 | NC_010776 | TTGAA | 3 | 18215 | 18228 | 14 | Fagopyrum esculentum subsp. ancestrale chloroplast |
25 | NC_014062 | TTGAA | 3 | 65582 | 65596 | 15 | Anomochloa marantoidea chloroplast |
26 | NC_013991 | TTGAA | 3 | 67796 | 67810 | 15 | Phoenix dactylifera chloroplast |
27 | NC_013823 | TTGAA | 3 | 64704 | 64717 | 14 | Typha latifolia chloroplast |
28 | NC_013273 | TTGAA | 3 | 65850 | 65864 | 15 | Coix lacryma-jobi chloroplast |
29 | NC_013088 | TTGAA | 3 | 65845 | 65859 | 15 | Dendrocalamus latiflorus chloroplast |
30 | NC_013088 | TTGAA | 3 | 60482 | 60496 | 15 | Dendrocalamus latiflorus chloroplast |
31 | NC_012927 | TTGAA | 3 | 65738 | 65752 | 15 | Bambusa oldhamii chloroplast |
32 | NC_012927 | TTGAA | 3 | 60362 | 60376 | 15 | Bambusa oldhamii chloroplast |
33 | NC_011713 | TTGAA | 3 | 58461 | 58475 | 15 | Festuca arundinacea chloroplast |
34 | NC_008589 | TTGAA | 3 | 24490 | 24503 | 14 | Thalassiosira pseudonana chloroplast |
35 | NC_009950 | TTGAA | 3 | 57929 | 57943 | 15 | Lolium perenne chloroplast |
36 | NC_009808 | TTGAA | 3 | 7227 | 7241 | 15 | Ipomoea purpurea chloroplast |
37 | NC_009601 | TTGAA | 3 | 64602 | 64616 | 15 | Dioscorea elephantipes chloroplast |
38 | NC_009600 | TTGAA | 3 | 69941 | 69955 | 15 | Illicium oligandrum chloroplast |
39 | NC_009573 | TTGAA | 3 | 250 | 263 | 14 | Rhodomonas salina chloroplast |
40 | NC_009274 | TTGAA | 3 | 63565 | 63578 | 14 | Lobularia maritima chloroplast |
41 | NC_008602 | TTGAA | 3 | 66296 | 66310 | 15 | Sorghum bicolor chloroplast |
42 | NC_020341 | TTGAA | 3 | 60728 | 60742 | 15 | Arundinaria gigantea chloroplast |
43 | NC_015820 | TTGAA | 3 | 60799 | 60813 | 15 | Acidosasa purpurea chloroplast |
44 | NC_015990 | TTGAA | 3 | 64796 | 64810 | 15 | Panicum virgatum chloroplast |
45 | NC_015831 | TTGAA | 3 | 65838 | 65852 | 15 | Ferrocalamus rimosivaginus plastid |
46 | NC_015831 | TTGAA | 3 | 60475 | 60489 | 15 | Ferrocalamus rimosivaginus plastid |
47 | NC_015830 | TTGAA | 3 | 65844 | 65858 | 15 | Bambusa emeiensis chloroplast |
48 | NC_015830 | TTGAA | 3 | 60467 | 60481 | 15 | Bambusa emeiensis chloroplast |
49 | NC_015826 | TTGAA | 3 | 66091 | 66105 | 15 | Phyllostachys nigra var. henonis chloroplast |
50 | NC_015826 | TTGAA | 3 | 60755 | 60769 | 15 | Phyllostachys nigra var. henonis chloroplast |
51 | NC_015820 | TTGAA | 3 | 66135 | 66149 | 15 | Acidosasa purpurea chloroplast |
52 | NC_015817 | TTGAA | 3 | 66082 | 66096 | 15 | Phyllostachys edulis chloroplast |
53 | NC_015817 | TTGAA | 3 | 60746 | 60760 | 15 | Phyllostachys edulis chloroplast |
54 | NC_015803 | TTGAA | 3 | 66129 | 66143 | 15 | Indocalamus longiauritus plastid |
55 | NC_015803 | TTGAA | 3 | 60793 | 60807 | 15 | Indocalamus longiauritus plastid |
56 | NC_017602 | TTGAA | 3 | 66706 | 66720 | 15 | Elaeis guineensis chloroplast |
57 | NC_020341 | TTGAA | 3 | 65472 | 65486 | 15 | Arundinaria gigantea chloroplast |
58 | NC_019651 | TTGAA | 3 | 57846 | 57860 | 15 | Lolium multiflorum plastid |
59 | NC_019650 | TTGAA | 3 | 57906 | 57920 | 15 | Festuca pratensis plastid |
60 | NC_019649 | TTGAA | 3 | 56452 | 56466 | 15 | Festuca ovina plastid |
61 | NC_019648 | TTGAA | 3 | 57875 | 57889 | 15 | Festuca altissima plastid |
62 | NC_018541 | TTGAA | 3 | 67428 | 67442 | 15 | Elodea canadensis chloroplast |
63 | NC_017835 | TTGAA | 3 | 63621 | 63635 | 15 | Oryza rufipogon chloroplast |
64 | NC_020362 | TTGAA | 3 | 71431 | 71445 | 15 | Heliconia collinsiana plastid |
65 | NC_016927 | TTGAA | 3 | 63634 | 63648 | 15 | Oryza meridionalis chloroplast |
66 | NC_016730 | TTGAA | 3 | 34404 | 34417 | 14 | Silene latifolia chloroplast |
67 | NC_016718 | TTGAA | 3 | 64984 | 64998 | 15 | Rhynchoryza subulata plastid |
68 | NC_016699 | TTGAA | 3 | 66087 | 66101 | 15 | Phyllostachys propinqua chloroplast |
69 | NC_016699 | TTGAA | 3 | 60750 | 60764 | 15 | Phyllostachys propinqua chloroplast |
70 | NC_016677 | TTGAA | 3 | 64997 | 65011 | 15 | Leersia tisserantii plastid |