ChloroMitoSSRDB 2.0 Webserver cum Database of Cholorplast and Mitochondrial Microsatellites

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Chloroplast Motifs - Imperfect GTCT Repeats

S.NoSequence IDMotifIterationsStartEndTract LengthSequence Name
1NC_011087GTCT362079962080911Paulinella chromatophora chromatophore
2NC_011087GTCT394282794283711Paulinella chromatophora chromatophore
3NC_014348GTCT312755412756411Pteridium aquilinum subsp. aquilinum chloroplast
4NC_014570GTCT3539895400012Eucalyptus grandis chloroplast
5NC_014573GTCT3650726508211Geranium palmatum plastid
6NC_014575GTCT3809628097312Cedrus deodara chloroplast
7NC_014674GTCT3556025561312Castanea mollissima chloroplast
8NC_014676GTCT3535045351512Theobroma cacao chloroplast
9NC_014697GTCT3517075171812Prunus persica chloroplast
10NC_015204GTCT3531415315212Gossypium thurberi chloroplast
11NC_015983GTCT3521965220712Cucumis melo subsp. melo chloroplast
12NC_015996GTCT3534975350812Pyrus pyrifolia chloroplast
13NC_016430GTCT3775227753211Eleutherococcus senticosus chloroplast
14NC_016433GTCT3115301154112Sesamum indicum chloroplast
15NC_016668GTCT3529865299712Gossypium raimondii chloroplast
16NC_016670GTCT3532675327812Gossypium darwinii chloroplast
17NC_016690GTCT3532905330112Gossypium tomentosum chloroplast
18NC_016692GTCT3531415315212Gossypium herbaceum subsp. africanum chloroplast
19NC_016711GTCT3531955320612Gossypium mustelinum chloroplast
20NC_016712GTCT3531015311212Gossypium arboreum chloroplast
21NC_016921GTCT3516825169312Pentactina rupicola chloroplast
22NC_017609GTCT3119961200712Phalaenopsis equestris chloroplast
23NC_017894GTCT3530345304512Gossypium gossypioides chloroplast
24NC_018109GTCT3525025251312Gossypium incanum chloroplast
25NC_018110GTCT3526505266112Gossypium somalense chloroplast
26NC_018111GTCT3525025251312Gossypium capitis-viridis chloroplast
27NC_018112GTCT3526745268512Gossypium areysianum chloroplast
28NC_018113GTCT3527835279412Gossypium robinsonii chloroplast
29NC_018114GTCT3114281143912Erycina pusilla chloroplast
30NC_020019GTCT3120211203212Camellia sinensis chloroplast
31NC_020098GTCT3116611167212Tectona grandis chloroplast
32NC_020152GTCT3556045561512Quercus rubra plastid
33NC_020431GTCT3110411105212Salvia miltiorrhiza chloroplast
34NC_021429GTCT3110901110112Cymbidium aloifolium voucher KUN:YJB100604 chloroplast
35NC_021430GTCT3111241113512Cymbidium sinense voucher KUN:YJB100605 chloroplast
36NC_021431GTCT3111971120812Cymbidium tortisepalum voucher KUN:HJL091027 chloroplast
37NC_021432GTCT3109701098112Cymbidium tracyanum voucher KUN:YJB100606 chloroplast
38NC_021433GTCT3110771108812Cymbidium mannii voucher KUN:YJB100602 chloroplast
39NC_021433GTCT3161321614211Cymbidium mannii voucher KUN:YJB100602 chloroplast
40NC_021455GTCT3514865149712Prinsepia utilis plastid
41NC_004543GTCT3794547946411 Anthoceros formosae chloroplast
42NC_007144GTCT3525935260412 Cucumis sativus chloroplast
43NC_007499GTCT3119191193012 Phalaenopsis aphrodite subsp. formosana chloroplast
44NC_007944GTCT3531795319012 Gossypium hirsutum chloroplast
45NC_008115GTCT3540775408812 Eucalyptus globulus subsp. globulus chloroplast
46NC_008336GTCT313310413311512 Nandina domestica chloroplast
47NC_008359GTCT3526455265612 Morus indica chloroplast
48NC_008454GTCT313297113298111 Pelargonium x hortorum chloroplast
49NC_008641GTCT3532325324312 Gossypium barbadense chloroplast
50NC_008822GTCT3375113752212 Chlorokybus atmophyticus chloroplast
51NC_008822GTCT3650276503812 Chlorokybus atmophyticus chloroplast
52NC_009272GTCT3731027311211 Draba nemorosa chloroplast
53NC_010323GTCT3530425305312 Carica papaya chloroplast
54NC_010776GTCT3107031071412 Fagopyrum esculentum subsp. ancestrale chloroplast
55NC_014056GTCT3109531096412 Oncidium Gower Ramsey chloroplast