Chloroplast Motifs - Imperfect GTCT Repeats
S.No | Sequence ID | Motif | Iterations | Start | End | Tract Length | Sequence Name |
---|---|---|---|---|---|---|---|
1 | NC_011087 | GTCT | 3 | 620799 | 620809 | 11 | Paulinella chromatophora chromatophore |
2 | NC_011087 | GTCT | 3 | 942827 | 942837 | 11 | Paulinella chromatophora chromatophore |
3 | NC_014348 | GTCT | 3 | 127554 | 127564 | 11 | Pteridium aquilinum subsp. aquilinum chloroplast |
4 | NC_014570 | GTCT | 3 | 53989 | 54000 | 12 | Eucalyptus grandis chloroplast |
5 | NC_014573 | GTCT | 3 | 65072 | 65082 | 11 | Geranium palmatum plastid |
6 | NC_014575 | GTCT | 3 | 80962 | 80973 | 12 | Cedrus deodara chloroplast |
7 | NC_014674 | GTCT | 3 | 55602 | 55613 | 12 | Castanea mollissima chloroplast |
8 | NC_014676 | GTCT | 3 | 53504 | 53515 | 12 | Theobroma cacao chloroplast |
9 | NC_014697 | GTCT | 3 | 51707 | 51718 | 12 | Prunus persica chloroplast |
10 | NC_015204 | GTCT | 3 | 53141 | 53152 | 12 | Gossypium thurberi chloroplast |
11 | NC_015983 | GTCT | 3 | 52196 | 52207 | 12 | Cucumis melo subsp. melo chloroplast |
12 | NC_015996 | GTCT | 3 | 53497 | 53508 | 12 | Pyrus pyrifolia chloroplast |
13 | NC_016430 | GTCT | 3 | 77522 | 77532 | 11 | Eleutherococcus senticosus chloroplast |
14 | NC_016433 | GTCT | 3 | 11530 | 11541 | 12 | Sesamum indicum chloroplast |
15 | NC_016668 | GTCT | 3 | 52986 | 52997 | 12 | Gossypium raimondii chloroplast |
16 | NC_016670 | GTCT | 3 | 53267 | 53278 | 12 | Gossypium darwinii chloroplast |
17 | NC_016690 | GTCT | 3 | 53290 | 53301 | 12 | Gossypium tomentosum chloroplast |
18 | NC_016692 | GTCT | 3 | 53141 | 53152 | 12 | Gossypium herbaceum subsp. africanum chloroplast |
19 | NC_016711 | GTCT | 3 | 53195 | 53206 | 12 | Gossypium mustelinum chloroplast |
20 | NC_016712 | GTCT | 3 | 53101 | 53112 | 12 | Gossypium arboreum chloroplast |
21 | NC_016921 | GTCT | 3 | 51682 | 51693 | 12 | Pentactina rupicola chloroplast |
22 | NC_017609 | GTCT | 3 | 11996 | 12007 | 12 | Phalaenopsis equestris chloroplast |
23 | NC_017894 | GTCT | 3 | 53034 | 53045 | 12 | Gossypium gossypioides chloroplast |
24 | NC_018109 | GTCT | 3 | 52502 | 52513 | 12 | Gossypium incanum chloroplast |
25 | NC_018110 | GTCT | 3 | 52650 | 52661 | 12 | Gossypium somalense chloroplast |
26 | NC_018111 | GTCT | 3 | 52502 | 52513 | 12 | Gossypium capitis-viridis chloroplast |
27 | NC_018112 | GTCT | 3 | 52674 | 52685 | 12 | Gossypium areysianum chloroplast |
28 | NC_018113 | GTCT | 3 | 52783 | 52794 | 12 | Gossypium robinsonii chloroplast |
29 | NC_018114 | GTCT | 3 | 11428 | 11439 | 12 | Erycina pusilla chloroplast |
30 | NC_020019 | GTCT | 3 | 12021 | 12032 | 12 | Camellia sinensis chloroplast |
31 | NC_020098 | GTCT | 3 | 11661 | 11672 | 12 | Tectona grandis chloroplast |
32 | NC_020152 | GTCT | 3 | 55604 | 55615 | 12 | Quercus rubra plastid |
33 | NC_020431 | GTCT | 3 | 11041 | 11052 | 12 | Salvia miltiorrhiza chloroplast |
34 | NC_021429 | GTCT | 3 | 11090 | 11101 | 12 | Cymbidium aloifolium voucher KUN:YJB100604 chloroplast |
35 | NC_021430 | GTCT | 3 | 11124 | 11135 | 12 | Cymbidium sinense voucher KUN:YJB100605 chloroplast |
36 | NC_021431 | GTCT | 3 | 11197 | 11208 | 12 | Cymbidium tortisepalum voucher KUN:HJL091027 chloroplast |
37 | NC_021432 | GTCT | 3 | 10970 | 10981 | 12 | Cymbidium tracyanum voucher KUN:YJB100606 chloroplast |
38 | NC_021433 | GTCT | 3 | 11077 | 11088 | 12 | Cymbidium mannii voucher KUN:YJB100602 chloroplast |
39 | NC_021433 | GTCT | 3 | 16132 | 16142 | 11 | Cymbidium mannii voucher KUN:YJB100602 chloroplast |
40 | NC_021455 | GTCT | 3 | 51486 | 51497 | 12 | Prinsepia utilis plastid |
41 | NC_004543 | GTCT | 3 | 79454 | 79464 | 11 | Anthoceros formosae chloroplast |
42 | NC_007144 | GTCT | 3 | 52593 | 52604 | 12 | Cucumis sativus chloroplast |
43 | NC_007499 | GTCT | 3 | 11919 | 11930 | 12 | Phalaenopsis aphrodite subsp. formosana chloroplast |
44 | NC_007944 | GTCT | 3 | 53179 | 53190 | 12 | Gossypium hirsutum chloroplast |
45 | NC_008115 | GTCT | 3 | 54077 | 54088 | 12 | Eucalyptus globulus subsp. globulus chloroplast |
46 | NC_008336 | GTCT | 3 | 133104 | 133115 | 12 | Nandina domestica chloroplast |
47 | NC_008359 | GTCT | 3 | 52645 | 52656 | 12 | Morus indica chloroplast |
48 | NC_008454 | GTCT | 3 | 132971 | 132981 | 11 | Pelargonium x hortorum chloroplast |
49 | NC_008641 | GTCT | 3 | 53232 | 53243 | 12 | Gossypium barbadense chloroplast |
50 | NC_008822 | GTCT | 3 | 37511 | 37522 | 12 | Chlorokybus atmophyticus chloroplast |
51 | NC_008822 | GTCT | 3 | 65027 | 65038 | 12 | Chlorokybus atmophyticus chloroplast |
52 | NC_009272 | GTCT | 3 | 73102 | 73112 | 11 | Draba nemorosa chloroplast |
53 | NC_010323 | GTCT | 3 | 53042 | 53053 | 12 | Carica papaya chloroplast |
54 | NC_010776 | GTCT | 3 | 10703 | 10714 | 12 | Fagopyrum esculentum subsp. ancestrale chloroplast |
55 | NC_014056 | GTCT | 3 | 10953 | 10964 | 12 | Oncidium Gower Ramsey chloroplast |