ChloroMitoSSRDB 2.0 Webserver cum Database of Cholorplast and Mitochondrial Microsatellites

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Chloroplast Motifs - Imperfect TTCTT Repeats

S.NoSequence IDMotifIterationsStartEndTract LengthSequence Name
1NC_008117TTCTT17181821826685 Zygnema circumcarinatum chloroplast
2NC_014346TTCTT433203133205020Floydiella terrestris chloroplast
3NC_017609TTCTT44900491819Phalaenopsis equestris chloroplast
4NC_021429TTCTT4732007321920Cymbidium aloifolium voucher KUN:YJB100604 chloroplast
5NC_001568TTCTT4457384575619 Epifagus virginiana chloroplast
6NC_007499TTCTT44890490819 Phalaenopsis aphrodite subsp. formosana chloroplast
7NC_008454TTCTT414481414483219 Pelargonium x hortorum chloroplast
8NC_009143TTCTT413693213695120 Populus trichocarpa chloroplast
9NC_009962TTCTT4966929671120 Ceratophyllum demersum chloroplast
10NC_014346TTCTT348973348974614Floydiella terrestris chloroplast
11NC_015083TTCTT3577385775215Erodium carvifolium chloroplast
12NC_015605TTCTT31785179915Nelumbo lutea chloroplast
13NC_015610TTCTT31948196114Nelumbo nucifera chloroplast
14NC_015891TTCTT310686210687615Spirodela polyrhiza chloroplast
15NC_015894TTCTT310750210751615Wolffiella lingulata chloroplast
16NC_015899TTCTT310713510714915Wolffia australiana chloroplast
17NC_016065TTCTT37476749015Taiwania cryptomerioides chloroplast DNA
18NC_016668TTCTT312677012678415Gossypium raimondii chloroplast
19NC_016670TTCTT312696012697415Gossypium darwinii chloroplast
20NC_016690TTCTT312700212701615Gossypium tomentosum chloroplast
21NC_016692TTCTT312688212689615Gossypium herbaceum subsp. africanum chloroplast
22NC_016711TTCTT312689212690615Gossypium mustelinum chloroplast
23NC_016712TTCTT312680012681415Gossypium arboreum chloroplast
24NC_016718TTCTT3650746508714Rhynchoryza subulata plastid
25NC_016727TTCTT311896811898215Silene vulgaris chloroplast
26NC_016753TTCTT310543710545115Colocasia esculenta chloroplast
27NC_017894TTCTT312684312685715Gossypium gossypioides chloroplast
28NC_018051TTCTT3329183293114Vigna unguiculata chloroplast
29NC_018051TTCTT3806108062516Vigna unguiculata chloroplast
30NC_018051TTCTT312269012270314Vigna unguiculata chloroplast
31NC_018109TTCTT312590112591515Gossypium incanum chloroplast
32NC_018110TTCTT312619012620415Gossypium somalense chloroplast
33NC_018111TTCTT312606612608015Gossypium capitis-viridis chloroplast
34NC_018112TTCTT312622212623615Gossypium areysianum chloroplast
35NC_018113TTCTT312653912655315Gossypium robinsonii chloroplast
36NC_020319TTCTT3204072042115Cycas revoluta chloroplast
37NC_020795TTCTT313253213254514Chondrus crispus plastid complete genome
38NC_021091TTCTT312313112314414Vigna angularis chloroplast DNA
39NC_021441TTCTT37476749015Taiwania flousiana chloroplast
40NC_021936TTCTT3703537036614Najas flexilis chloroplast
41NC_021936TTCTT3729477296115Najas flexilis chloroplast
42NC_001603TTCTT3172531726614 Euglena gracilis chloroplast
43NC_001865TTCTT39218923114 Chlorella vulgaris chloroplast
44NC_001865TTCTT3675676758014 Chlorella vulgaris chloroplast
45NC_001865TTCTT3699516996414 Chlorella vulgaris chloroplast
46NC_001865TTCTT3908179083014 Chlorella vulgaris chloroplast
47NC_001865TTCTT312884012885415 Chlorella vulgaris chloroplast
48NC_001865TTCTT313740813742114 Chlorella vulgaris chloroplast
49NC_002693TTCTT3373523736514 Oenothera elata subsp. hookeri plastid plastome I
50NC_007944TTCTT312687712689115 Gossypium hirsutum chloroplast
51NC_008101TTCTT3365803659415 Scenedesmus obliquus chloroplast
52NC_008101TTCTT311724511725915 Scenedesmus obliquus chloroplast
53NC_008235TTCTT3629986301215 Populus alba chloroplast
54NC_008359TTCTT313281613282914 Morus indica chloroplast
55NC_008372TTCTT312151112152515 Stigeoclonium helveticum chloroplast
56NC_008407TTCTT313647113648616 Jasminum nudiflorum chloroplast
57NC_008796TTCTT3814628147514 Ranunculus macranthus chloroplast
58NC_008822TTCTT3473254733814 Chlorokybus atmophyticus chloroplast
59NC_009143TTCTT3284442845815 Populus trichocarpa chloroplast
60NC_009143TTCTT3633946340815 Populus trichocarpa chloroplast
61NC_009259TTCTT3795597957416 Phaseolus vulgaris chloroplast
62NC_009259TTCTT312170212171514 Phaseolus vulgaris chloroplast
63NC_009265TTCTT3818688188215 Aethionema cordifolium chloroplast
64NC_009618TTCTT315856515857915 Cycas taitungensis chloroplast
65NC_009808TTCTT3721457215814 Ipomoea purpurea chloroplast
66NC_009962TTCTT312860712862115 Ceratophyllum demersum chloroplast
67NC_010109TTCTT310492010493415 Lemna minor chloroplast
68NC_010358TTCTT3368813689414 Oenothera argillicola chloroplast
69NC_010360TTCTT3371943720714 Oenothera glazioviana chloroplast
70NC_010361TTCTT3372843729714 Oenothera biennis chloroplast
71NC_010548TTCTT3483054831915 Cryptomeria japonica chloroplast
72NC_011031TTCTT315111915113214 Oedogonium cardiacum chloroplast
73NC_011031TTCTT317036617038015 Oedogonium cardiacum chloroplast
74NC_011942TTCTT3953769539116 Gnetum parvifolium chloroplast
75NC_012052TTCTT310154710156014 Syntrichia ruralis chloroplast
76NC_013843TTCTT3329423295514 Vigna radiata chloroplast
77NC_013843TTCTT312271412272714 Vigna radiata chloroplast