Chloroplast Motifs - Imperfect TTCTT Repeats
S.No | Sequence ID | Motif | Iterations | Start | End | Tract Length | Sequence Name |
---|---|---|---|---|---|---|---|
1 | NC_008117 | TTCTT | 17 | 18182 | 18266 | 85 | Zygnema circumcarinatum chloroplast |
2 | NC_014346 | TTCTT | 4 | 332031 | 332050 | 20 | Floydiella terrestris chloroplast |
3 | NC_017609 | TTCTT | 4 | 4900 | 4918 | 19 | Phalaenopsis equestris chloroplast |
4 | NC_021429 | TTCTT | 4 | 73200 | 73219 | 20 | Cymbidium aloifolium voucher KUN:YJB100604 chloroplast |
5 | NC_001568 | TTCTT | 4 | 45738 | 45756 | 19 | Epifagus virginiana chloroplast |
6 | NC_007499 | TTCTT | 4 | 4890 | 4908 | 19 | Phalaenopsis aphrodite subsp. formosana chloroplast |
7 | NC_008454 | TTCTT | 4 | 144814 | 144832 | 19 | Pelargonium x hortorum chloroplast |
8 | NC_009143 | TTCTT | 4 | 136932 | 136951 | 20 | Populus trichocarpa chloroplast |
9 | NC_009962 | TTCTT | 4 | 96692 | 96711 | 20 | Ceratophyllum demersum chloroplast |
10 | NC_014346 | TTCTT | 3 | 489733 | 489746 | 14 | Floydiella terrestris chloroplast |
11 | NC_015083 | TTCTT | 3 | 57738 | 57752 | 15 | Erodium carvifolium chloroplast |
12 | NC_015605 | TTCTT | 3 | 1785 | 1799 | 15 | Nelumbo lutea chloroplast |
13 | NC_015610 | TTCTT | 3 | 1948 | 1961 | 14 | Nelumbo nucifera chloroplast |
14 | NC_015891 | TTCTT | 3 | 106862 | 106876 | 15 | Spirodela polyrhiza chloroplast |
15 | NC_015894 | TTCTT | 3 | 107502 | 107516 | 15 | Wolffiella lingulata chloroplast |
16 | NC_015899 | TTCTT | 3 | 107135 | 107149 | 15 | Wolffia australiana chloroplast |
17 | NC_016065 | TTCTT | 3 | 7476 | 7490 | 15 | Taiwania cryptomerioides chloroplast DNA |
18 | NC_016668 | TTCTT | 3 | 126770 | 126784 | 15 | Gossypium raimondii chloroplast |
19 | NC_016670 | TTCTT | 3 | 126960 | 126974 | 15 | Gossypium darwinii chloroplast |
20 | NC_016690 | TTCTT | 3 | 127002 | 127016 | 15 | Gossypium tomentosum chloroplast |
21 | NC_016692 | TTCTT | 3 | 126882 | 126896 | 15 | Gossypium herbaceum subsp. africanum chloroplast |
22 | NC_016711 | TTCTT | 3 | 126892 | 126906 | 15 | Gossypium mustelinum chloroplast |
23 | NC_016712 | TTCTT | 3 | 126800 | 126814 | 15 | Gossypium arboreum chloroplast |
24 | NC_016718 | TTCTT | 3 | 65074 | 65087 | 14 | Rhynchoryza subulata plastid |
25 | NC_016727 | TTCTT | 3 | 118968 | 118982 | 15 | Silene vulgaris chloroplast |
26 | NC_016753 | TTCTT | 3 | 105437 | 105451 | 15 | Colocasia esculenta chloroplast |
27 | NC_017894 | TTCTT | 3 | 126843 | 126857 | 15 | Gossypium gossypioides chloroplast |
28 | NC_018051 | TTCTT | 3 | 32918 | 32931 | 14 | Vigna unguiculata chloroplast |
29 | NC_018051 | TTCTT | 3 | 80610 | 80625 | 16 | Vigna unguiculata chloroplast |
30 | NC_018051 | TTCTT | 3 | 122690 | 122703 | 14 | Vigna unguiculata chloroplast |
31 | NC_018109 | TTCTT | 3 | 125901 | 125915 | 15 | Gossypium incanum chloroplast |
32 | NC_018110 | TTCTT | 3 | 126190 | 126204 | 15 | Gossypium somalense chloroplast |
33 | NC_018111 | TTCTT | 3 | 126066 | 126080 | 15 | Gossypium capitis-viridis chloroplast |
34 | NC_018112 | TTCTT | 3 | 126222 | 126236 | 15 | Gossypium areysianum chloroplast |
35 | NC_018113 | TTCTT | 3 | 126539 | 126553 | 15 | Gossypium robinsonii chloroplast |
36 | NC_020319 | TTCTT | 3 | 20407 | 20421 | 15 | Cycas revoluta chloroplast |
37 | NC_020795 | TTCTT | 3 | 132532 | 132545 | 14 | Chondrus crispus plastid complete genome |
38 | NC_021091 | TTCTT | 3 | 123131 | 123144 | 14 | Vigna angularis chloroplast DNA |
39 | NC_021441 | TTCTT | 3 | 7476 | 7490 | 15 | Taiwania flousiana chloroplast |
40 | NC_021936 | TTCTT | 3 | 70353 | 70366 | 14 | Najas flexilis chloroplast |
41 | NC_021936 | TTCTT | 3 | 72947 | 72961 | 15 | Najas flexilis chloroplast |
42 | NC_001603 | TTCTT | 3 | 17253 | 17266 | 14 | Euglena gracilis chloroplast |
43 | NC_001865 | TTCTT | 3 | 9218 | 9231 | 14 | Chlorella vulgaris chloroplast |
44 | NC_001865 | TTCTT | 3 | 67567 | 67580 | 14 | Chlorella vulgaris chloroplast |
45 | NC_001865 | TTCTT | 3 | 69951 | 69964 | 14 | Chlorella vulgaris chloroplast |
46 | NC_001865 | TTCTT | 3 | 90817 | 90830 | 14 | Chlorella vulgaris chloroplast |
47 | NC_001865 | TTCTT | 3 | 128840 | 128854 | 15 | Chlorella vulgaris chloroplast |
48 | NC_001865 | TTCTT | 3 | 137408 | 137421 | 14 | Chlorella vulgaris chloroplast |
49 | NC_002693 | TTCTT | 3 | 37352 | 37365 | 14 | Oenothera elata subsp. hookeri plastid plastome I |
50 | NC_007944 | TTCTT | 3 | 126877 | 126891 | 15 | Gossypium hirsutum chloroplast |
51 | NC_008101 | TTCTT | 3 | 36580 | 36594 | 15 | Scenedesmus obliquus chloroplast |
52 | NC_008101 | TTCTT | 3 | 117245 | 117259 | 15 | Scenedesmus obliquus chloroplast |
53 | NC_008235 | TTCTT | 3 | 62998 | 63012 | 15 | Populus alba chloroplast |
54 | NC_008359 | TTCTT | 3 | 132816 | 132829 | 14 | Morus indica chloroplast |
55 | NC_008372 | TTCTT | 3 | 121511 | 121525 | 15 | Stigeoclonium helveticum chloroplast |
56 | NC_008407 | TTCTT | 3 | 136471 | 136486 | 16 | Jasminum nudiflorum chloroplast |
57 | NC_008796 | TTCTT | 3 | 81462 | 81475 | 14 | Ranunculus macranthus chloroplast |
58 | NC_008822 | TTCTT | 3 | 47325 | 47338 | 14 | Chlorokybus atmophyticus chloroplast |
59 | NC_009143 | TTCTT | 3 | 28444 | 28458 | 15 | Populus trichocarpa chloroplast |
60 | NC_009143 | TTCTT | 3 | 63394 | 63408 | 15 | Populus trichocarpa chloroplast |
61 | NC_009259 | TTCTT | 3 | 79559 | 79574 | 16 | Phaseolus vulgaris chloroplast |
62 | NC_009259 | TTCTT | 3 | 121702 | 121715 | 14 | Phaseolus vulgaris chloroplast |
63 | NC_009265 | TTCTT | 3 | 81868 | 81882 | 15 | Aethionema cordifolium chloroplast |
64 | NC_009618 | TTCTT | 3 | 158565 | 158579 | 15 | Cycas taitungensis chloroplast |
65 | NC_009808 | TTCTT | 3 | 72145 | 72158 | 14 | Ipomoea purpurea chloroplast |
66 | NC_009962 | TTCTT | 3 | 128607 | 128621 | 15 | Ceratophyllum demersum chloroplast |
67 | NC_010109 | TTCTT | 3 | 104920 | 104934 | 15 | Lemna minor chloroplast |
68 | NC_010358 | TTCTT | 3 | 36881 | 36894 | 14 | Oenothera argillicola chloroplast |
69 | NC_010360 | TTCTT | 3 | 37194 | 37207 | 14 | Oenothera glazioviana chloroplast |
70 | NC_010361 | TTCTT | 3 | 37284 | 37297 | 14 | Oenothera biennis chloroplast |
71 | NC_010548 | TTCTT | 3 | 48305 | 48319 | 15 | Cryptomeria japonica chloroplast |
72 | NC_011031 | TTCTT | 3 | 151119 | 151132 | 14 | Oedogonium cardiacum chloroplast |
73 | NC_011031 | TTCTT | 3 | 170366 | 170380 | 15 | Oedogonium cardiacum chloroplast |
74 | NC_011942 | TTCTT | 3 | 95376 | 95391 | 16 | Gnetum parvifolium chloroplast |
75 | NC_012052 | TTCTT | 3 | 101547 | 101560 | 14 | Syntrichia ruralis chloroplast |
76 | NC_013843 | TTCTT | 3 | 32942 | 32955 | 14 | Vigna radiata chloroplast |
77 | NC_013843 | TTCTT | 3 | 122714 | 122727 | 14 | Vigna radiata chloroplast |