ChloroMitoSSRDB 2.0 Webserver cum Database of Cholorplast and Mitochondrial Microsatellites

Back To Motif Summary

Chloroplast Motifs - Imperfect GGAT Repeats

S.NoSequence IDMotifIterationsStartEndTract LengthSequence Name
1NC_014570GGAT314136714137812Eucalyptus grandis chloroplast
2NC_014573GGAT31431144212Geranium palmatum plastid
3NC_014575GGAT3519005191112Cedrus deodara chloroplast
4NC_014589GGAT3478284783811Cathaya argyrophylla chloroplast
5NC_014589GGAT3969389694912Cathaya argyrophylla chloroplast
6NC_014589GGAT310066410067411Cathaya argyrophylla chloroplast
7NC_014674GGAT314269314270412Castanea mollissima chloroplast
8NC_014675GGAT313912313913412Isoetes flaccida chloroplast
9NC_014676GGAT314165614166712Theobroma cacao chloroplast
10NC_014697GGAT313888913890012Prunus persica chloroplast
11NC_014807GGAT314099014100112Corynocarpus laevigata chloroplast
12NC_015113GGAT313673213674312Anthriscus cerefolium chloroplast
13NC_015139GGAT313465313466412Brassica rapa subsp. pekinensis chloroplast
14NC_015204GGAT314128914130012Gossypium thurberi chloroplast
15NC_015206GGAT313720613721712Fragaria vesca subsp. vesca chloroplast
16NC_015308GGAT314212514213612Hevea brasiliensis chloroplast
17NC_015359GGAT310109310110311Chlorella variabilis plastid
18NC_015401GGAT313773113774212Olea europaea subsp. europaea plastid
19NC_015543GGAT313268813269912Jacobaea vulgaris chloroplast
20NC_015604GGAT313771813772912Olea europaea subsp. cuspidata chloroplast
21NC_015605GGAT314434114435212Nelumbo lutea chloroplast
22NC_015608GGAT313781313782412Olea woodiana subsp. woodiana chloroplast
23NC_015610GGAT314443014444112Nelumbo nucifera chloroplast
24NC_015621GGAT310247810248912Ageratina adenophora chloroplast
25NC_015623GGAT313775213776312Olea europaea subsp. maroccana chloroplast
26NC_015803GGAT312589312590412Indocalamus longiauritus plastid
27NC_015817GGAT312590412591512Phyllostachys edulis chloroplast
28NC_015820GGAT312592512593612Acidosasa purpurea chloroplast
29NC_015826GGAT312606412607512Phyllostachys nigra var. henonis chloroplast
30NC_015830GGAT312571512572612Bambusa emeiensis chloroplast
31NC_015831GGAT312566112567212Ferrocalamus rimosivaginus plastid
32NC_015891GGAT314980114981212Spirodela polyrhiza chloroplast
33NC_015892GGAT314089714090812Magnolia kwangsiensis chloroplast
34NC_015894GGAT315049715050812Wolffiella lingulata chloroplast
35NC_015899GGAT314968514969612Wolffia australiana chloroplast
36NC_015983GGAT313782813783912Cucumis melo subsp. melo chloroplast
37NC_015990GGAT312473112474212Panicum virgatum chloroplast
38NC_015996GGAT314103914105012Pyrus pyrifolia chloroplast
39NC_016058GGAT32428243811Larix decidua chloroplast
40NC_016064GGAT3344333444311Pseudotsuga sinensis var. wilsoniana chloroplast
41NC_016065GGAT31336134813Taiwania cryptomerioides chloroplast DNA
42NC_016068GGAT313769913771012Nicotiana undulata chloroplast
43NC_016069GGAT3368353684612Picea morrisonicola chloroplast
44NC_016069GGAT3406394064911Picea morrisonicola chloroplast
45NC_016069GGAT3988909890011Picea morrisonicola chloroplast
46NC_016430GGAT313880813881912Eleutherococcus senticosus chloroplast
47NC_016433GGAT313568113569212Sesamum indicum chloroplast
48NC_016468GGAT313534113535212Boea hygrometrica chloroplast
49NC_016668GGAT314114414115512Gossypium raimondii chloroplast
50NC_016670GGAT314141214142312Gossypium darwinii chloroplast
51NC_016677GGAT312367312368412Leersia tisserantii plastid
52NC_016690GGAT314145514146612Gossypium tomentosum chloroplast
53NC_016692GGAT314133714134812Gossypium herbaceum subsp. africanum chloroplast
54NC_016699GGAT312592812593912Phyllostachys propinqua chloroplast
55NC_016711GGAT314133614134712Gossypium mustelinum chloroplast
56NC_016712GGAT314125514126612Gossypium arboreum chloroplast
57NC_016718GGAT312343612344712Rhynchoryza subulata plastid
58NC_016727GGAT313408213409312Silene vulgaris chloroplast
59NC_016728GGAT3541495416012Silene noctiflora chloroplast
60NC_016728GGAT313596413597512Silene noctiflora chloroplast
61NC_016729GGAT313210013211112Silene conica chloroplast
62NC_016730GGAT313424513425612Silene latifolia chloroplast
63NC_016734GGAT313404713405812Brassica napus chloroplast
64NC_016736GGAT314349014350112Ricinus communis chloroplast
65NC_016753GGAT314334114335212Colocasia esculenta chloroplast
66NC_016921GGAT313782613783712Pentactina rupicola chloroplast
67NC_016927GGAT312173812174912Oryza meridionalis chloroplast
68NC_016986GGAT3335063351712Ginkgo biloba chloroplast
69NC_016986GGAT314667414668512Ginkgo biloba chloroplast
70NC_017006GGAT314231814232912Mankyua chejuensis chloroplast
71NC_017602GGAT313768213769312Elaeis guineensis chloroplast
72NC_017754GGAT32504251512Eutreptiella gymnastica plastid
73NC_017835GGAT312172512173612Oryza rufipogon chloroplast
74NC_017894GGAT314101214102312Gossypium gossypioides chloroplast
75NC_018109GGAT314027214028312Gossypium incanum chloroplast
76NC_018110GGAT314059514060612Gossypium somalense chloroplast
77NC_018111GGAT314049414050512Gossypium capitis-viridis chloroplast
78NC_018112GGAT314062814063912Gossypium areysianum chloroplast
79NC_018113GGAT314090814091912Gossypium robinsonii chloroplast
80NC_018114GGAT312555012556112Erycina pusilla chloroplast
81NC_018117GGAT313765713766812Datura stramonium chloroplast
82NC_018357GGAT314124214125312Magnolia denudata chloroplast
83NC_018552GGAT313839513840612Capsicum annuum chloroplast
84NC_018565GGAT313598813599912Pachycladon enysii chloroplast
85NC_018569GGAT3319323194211Trebouxiophyceae sp. MX-AZ01 chloroplast
86NC_019601GGAT313712513713612Fragaria chiloensis chloroplast
87NC_019602GGAT313714313715412Fragaria virginiana chloroplast
88NC_019616GGAT316885016886112Vaccinium macrocarpon plastid
89NC_019628GGAT3262042621411Pellia endiviifolia chloroplast
90NC_019648GGAT312167912169012Festuca altissima plastid
91NC_019649GGAT311975911977012Festuca ovina plastid
92NC_019650GGAT312168912170012Festuca pratensis plastid
93NC_019651GGAT312157512158612Lolium multiflorum plastid
94NC_020019GGAT313854413855512Camellia sinensis chloroplast
95NC_020092GGAT313284413285512Chrysanthemum x morifolium chloroplast
96NC_020098GGAT313606213607312Tectona grandis chloroplast
97NC_020147GGAT3469984700811Ophioglossum californicum chloroplast
98NC_020147GGAT3474124742211Ophioglossum californicum chloroplast
99NC_020147GGAT313509113510212Ophioglossum californicum chloroplast
100NC_020152GGAT314300514301612Quercus rubra plastid
101NC_020316GGAT314137214138312Magnolia officinalis chloroplast
102NC_020317GGAT314128514129612Magnolia officinalis subsp. biloba voucher SC001 chloroplast
103NC_020318GGAT314081914083012Magnolia grandiflora voucher NJ016 chloroplast
104NC_020319GGAT37249726012Cycas revoluta chloroplast
105NC_020320GGAT313277113278212Chrysanthemum indicum voucher HeN001 chloroplast
106NC_020341GGAT312516012517112Arundinaria gigantea chloroplast
107NC_020362GGAT314277714278812Heliconia collinsiana plastid
108NC_020363GGAT313747913749012Zingiber spectabile plastid
109NC_020364GGAT313836413837512Pseudophoenix vinifera plastid
110NC_020365GGAT313797013798112Calamus caryotoides plastid
111NC_020366GGAT313887613888712Bismarckia nobilis plastid
112NC_020367GGAT313842513843612Dasypogon bromeliifolius plastid
113NC_020431GGAT313323413324512Salvia miltiorrhiza chloroplast
114NC_020438GGAT311823411824512Gonium pectorale chloroplast
115NC_020607GGAT313287113288212Artemisia frigida chloroplast
116NC_021075GGAT317269517270612Calliarthron tuberculosum chloroplast
117NC_021101GGAT313840613841712Francoa sonchifolia plastid
118NC_021102GGAT313555513556612Pachycladon cheesemanii chloroplast
119NC_021111GGAT3376093762012Cistanche deserticola chloroplast
120NC_021372GGAT312709112710212Pharus latifolius chloroplast
121NC_021423GGAT313679613680712Catharanthus roseus cultivar Pacifica Punch Halo chloroplast
122NC_021425GGAT314181614182712Tetracentron sinense chloroplast
123NC_021426GGAT314315214316312Trochodendron aralioides chloroplast
124NC_021437GGAT3265952660511Cunninghamia lanceolata chloroplast
125NC_021441GGAT31336134813Taiwania flousiana chloroplast
126NC_021449GGAT313432313433412Utricularia gibba chloroplast
127NC_021455GGAT313738113739212Prinsepia utilis plastid
128NC_000932GGAT313553413554512 Arabidopsis thaliana chloroplast
129NC_001320GGAT312170112171212 Oryza sativa Japonica Group plastid
130NC_001666GGAT312546612547712 Zea mays chloroplast
131NC_001865GGAT311410311411311 Chlorella vulgaris chloroplast
132NC_001879GGAT313776313777412 Nicotiana tabacum plastid
133NC_002202GGAT3167971680711 Spinacia oleracea plastid
134NC_002202GGAT313339413340512 Spinacia oleracea plastid
135NC_002693GGAT314566114567212 Oenothera elata subsp. hookeri plastid plastome I
136NC_002762GGAT312172512173612 Triticum aestivum chloroplast
137NC_003386GGAT3688326884211 Psilotum nudum chloroplast
138NC_004561GGAT313838213839312 Atropa belladonna chloroplast
139NC_004993GGAT313678213679312 Calycanthus floridus var. glaucus chloroplast
140NC_005878GGAT3466934670412 Saccharum hybrid cultivar SP-80-3280 chloroplast
141NC_005973GGAT312167412168512 Oryza nivara chloroplast
142NC_006050GGAT35525553612 Nymphaea alba chloroplast
143NC_006050GGAT314127014128112 Nymphaea alba chloroplast
144NC_006084GGAT312624912626012 Saccharum hybrid cultivar NCo 310 chloroplast
145NC_006290GGAT313838513839612 Panax ginseng chloroplast
146NC_007144GGAT313757713758812 Cucumis sativus chloroplast
147NC_007407GGAT313601413602512 Acorus calamus plastid
148NC_007500GGAT313776113777212 Nicotiana sylvestris chloroplast
149NC_007578GGAT313457513458612 Lactuca sativa chloroplast
150NC_007602GGAT313750113751212 Nicotiana tomentosiformis chloroplast
151NC_007898GGAT313726213727312 Solanum lycopersicum chloroplast
152NC_007943GGAT313717113718212 Solanum bulbocastanum chloroplast
153NC_007944GGAT314134014135112 Gossypium hirsutum chloroplast
154NC_007957GGAT314216214217312 Vitis vinifera chloroplast
155NC_007977GGAT313331313332412 Helianthus annuus chloroplast
156NC_008096GGAT313712413713512 Solanum tuberosum chloroplast
157NC_008115GGAT314151014152112 Eucalyptus globulus subsp. globulus chloroplast
158NC_008155GGAT312168012169112 Oryza sativa Indica Group chloroplast
159NC_008235GGAT313712813713912 Populus alba chloroplast
160NC_008325GGAT313700713701812 Daucus carota chloroplast
161NC_008326GGAT314111014112112 Liriodendron tulipifera chloroplast
162NC_008334GGAT314071414072512 Citrus sinensis chloroplast
163NC_008335GGAT314354414355512 Platanus occidentalis chloroplast
164NC_008336GGAT313789513790612 Nandina domestica chloroplast
165NC_008359GGAT314025514026612 Morus indica chloroplast
166NC_008454GGAT3850078501812 Pelargonium x hortorum chloroplast
167NC_008456GGAT314155514156612 Drimys granadensis chloroplast
168NC_008457GGAT314156414157512 Piper cenocladum chloroplast
169NC_008535GGAT313691913693012 Coffea arabica chloroplast
170NC_008588GGAT311690211691413 Phaeodactylum tricornutum chloroplast
171NC_008590GGAT312333112334212 Hordeum vulgare subsp. vulgare chloroplast
172NC_008591GGAT312331512332612 Agrostis stolonifera chloroplast
173NC_008602GGAT312633912635012 Sorghum bicolor chloroplast
174NC_008641GGAT314137214138312 Gossypium barbadense chloroplast
175NC_008788GGAT35173518412 Nuphar advena chloroplast
176NC_008796GGAT313667313668412 Ranunculus macranthus chloroplast
177NC_009143GGAT313766613767712 Populus trichocarpa chloroplast
178NC_009265GGAT313520413521512 Aethionema cordifolium chloroplast
179NC_009266GGAT3307533076412 Aethionema grandiflorum chloroplast
180NC_009266GGAT313530513531612 Aethionema grandiflorum chloroplast
181NC_009267GGAT313579513580612 Olimarabidopsis pumila chloroplast
182NC_009268GGAT313481013482112 Arabis hirsuta chloroplast
183NC_009269GGAT313559213560312 Barbarea verna chloroplast
184NC_009270GGAT313556813557912 Capsella bursa-pastoris chloroplast
185NC_009271GGAT313622313623412 Crucihimalaya wallichii chloroplast
186NC_009272GGAT313448813449912 Draba nemorosa chloroplast
187NC_009273GGAT313583713584812 Lepidium virginicum chloroplast
188NC_009274GGAT313390913392012 Lobularia maritima chloroplast
189NC_009275GGAT313615613616712 Nasturtium officinale chloroplast
190NC_009598GGAT313936513937612 Chloranthus spicatus chloroplast
191NC_009599GGAT314017414018512 Buxus microphylla chloroplast
192NC_009600GGAT314039914041012 Illicium oligandrum chloroplast
193NC_009601GGAT313392013393112 Dioscorea elephantipes chloroplast
194NC_009618GGAT314540014541112 Cycas taitungensis chloroplast
195NC_009766GGAT311078911080012 Cuscuta reflexa chloroplast
196NC_009808GGAT314628214629312 Ipomoea purpurea chloroplast
197NC_009950GGAT312165912167012 Lolium perenne chloroplast
198NC_009963GGAT311469711470812 Cuscuta exaltata chloroplast
199NC_010093GGAT313568413569512 Acorus americanus chloroplast
200NC_010109GGAT314760114761212 Lemna minor chloroplast
201NC_010323GGAT314121114122212 Carica papaya chloroplast
202NC_010358GGAT314488514489612 Oenothera argillicola chloroplast
203NC_010359GGAT34275428511 Aneura mirabilis chloroplast
204NC_010360GGAT314545014546112 Oenothera glazioviana chloroplast
205NC_010361GGAT314493714494812 Oenothera biennis chloroplast
206NC_010362GGAT314359714360812 Oenothera parviflora chloroplast
207NC_010433GGAT314236514237612 Manihot esculenta chloroplast
208NC_010442GGAT315934615935712 Trachelium caeruleum chloroplast
209NC_010548GGAT3422574226913 Cryptomeria japonica chloroplast
210NC_010601GGAT313353413354512 Guizotia abyssinica chloroplast
211NC_010654GGAT310633510634612 Welwitschia mirabilis chloroplast
212NC_010776GGAT3931999320911 Fagopyrum esculentum subsp. ancestrale chloroplast
213NC_010776GGAT314139414140512 Fagopyrum esculentum subsp. ancestrale chloroplast
214NC_011713GGAT312233612234712 Festuca arundinacea chloroplast
215NC_011930GGAT3473714738212 Keteleeria davidiana chloroplast
216NC_011930GGAT3489144892512 Keteleeria davidiana chloroplast
217NC_012224GGAT314543914545012 Jatropha curcas chloroplast
218NC_012615GGAT314092714093812 Megaleranthis saniculifolia chloroplast
219NC_012818GGAT313679113680212 Alsophila spinulosa chloroplast
220NC_012927GGAT312558412559512 Bambusa oldhamii chloroplast
221NC_013086GGAT37642765211 Selaginella moellendorffii plastid
222NC_013086GGAT3284482845811 Selaginella moellendorffii plastid
223NC_013088GGAT312566012567112 Dendrocalamus latiflorus chloroplast
224NC_013273GGAT312585312586412 Coix lacryma-jobi chloroplast
225NC_013553GGAT313454413455512 Parthenium argentatum chloroplast
226NC_013823GGAT314217114218212 Typha latifolia chloroplast
227NC_013991GGAT313898913900012 Phoenix dactylifera chloroplast
228NC_014056GGAT312730412731512 Oncidium Gower Ramsey chloroplast
229NC_014062GGAT312600312601412 Anomochloa marantoidea chloroplast
230NC_013707GGAT313772113773212 Olea europaea chloroplast