Chloroplast Motifs - Imperfect AAGA Repeats
S.No | Sequence ID | Motif | Iterations | Start | End | Tract Length | Sequence Name |
---|---|---|---|---|---|---|---|
1 | NC_016430 | AAGA | 5 | 72809 | 72827 | 19 | Eleutherococcus senticosus chloroplast |
2 | NC_002693 | AAGA | 5 | 13250 | 13268 | 19 | Oenothera elata subsp. hookeri plastid plastome I |
3 | NC_006290 | AAGA | 5 | 72208 | 72226 | 19 | Panax ginseng chloroplast |
4 | NC_010358 | AAGA | 5 | 12795 | 12813 | 19 | Oenothera argillicola chloroplast |
5 | NC_010360 | AAGA | 5 | 13163 | 13181 | 19 | Oenothera glazioviana chloroplast |
6 | NC_010361 | AAGA | 5 | 13244 | 13262 | 19 | Oenothera biennis chloroplast |
7 | NC_015403 | AAGA | 4 | 31511 | 31526 | 16 | Fistulifera sp. JPCC DA0580 chloroplast |
8 | NC_010109 | AAGA | 4 | 71768 | 71783 | 16 | Lemna minor chloroplast |
9 | NC_011087 | AAGA | 3 | 869671 | 869682 | 12 | Paulinella chromatophora chromatophore |
10 | NC_014346 | AAGA | 3 | 49950 | 49960 | 11 | Floydiella terrestris chloroplast |
11 | NC_014346 | AAGA | 3 | 61057 | 61068 | 12 | Floydiella terrestris chloroplast |
12 | NC_014346 | AAGA | 3 | 72180 | 72190 | 11 | Floydiella terrestris chloroplast |
13 | NC_014346 | AAGA | 3 | 118365 | 118375 | 11 | Floydiella terrestris chloroplast |
14 | NC_014346 | AAGA | 3 | 127547 | 127557 | 11 | Floydiella terrestris chloroplast |
15 | NC_014346 | AAGA | 3 | 157605 | 157616 | 12 | Floydiella terrestris chloroplast |
16 | NC_014346 | AAGA | 3 | 383523 | 383533 | 11 | Floydiella terrestris chloroplast |
17 | NC_014346 | AAGA | 3 | 389646 | 389656 | 11 | Floydiella terrestris chloroplast |
18 | NC_014346 | AAGA | 3 | 415945 | 415955 | 11 | Floydiella terrestris chloroplast |
19 | NC_014346 | AAGA | 3 | 425559 | 425569 | 11 | Floydiella terrestris chloroplast |
20 | NC_014346 | AAGA | 3 | 432984 | 432994 | 11 | Floydiella terrestris chloroplast |
21 | NC_014346 | AAGA | 3 | 433116 | 433126 | 11 | Floydiella terrestris chloroplast |
22 | NC_014346 | AAGA | 3 | 457222 | 457232 | 11 | Floydiella terrestris chloroplast |
23 | NC_014346 | AAGA | 3 | 487117 | 487127 | 11 | Floydiella terrestris chloroplast |
24 | NC_014570 | AAGA | 3 | 121278 | 121289 | 12 | Eucalyptus grandis chloroplast |
25 | NC_014570 | AAGA | 3 | 131129 | 131140 | 12 | Eucalyptus grandis chloroplast |
26 | NC_014573 | AAGA | 3 | 8528 | 8538 | 11 | Geranium palmatum plastid |
27 | NC_014573 | AAGA | 3 | 45307 | 45318 | 12 | Geranium palmatum plastid |
28 | NC_014589 | AAGA | 3 | 56471 | 56481 | 11 | Cathaya argyrophylla chloroplast |
29 | NC_014674 | AAGA | 3 | 33219 | 33230 | 12 | Castanea mollissima chloroplast |
30 | NC_014674 | AAGA | 3 | 68955 | 68965 | 11 | Castanea mollissima chloroplast |
31 | NC_014674 | AAGA | 3 | 132399 | 132410 | 12 | Castanea mollissima chloroplast |
32 | NC_014675 | AAGA | 3 | 28963 | 28974 | 12 | Isoetes flaccida chloroplast |
33 | NC_014699 | AAGA | 3 | 4212 | 4223 | 12 | Equisetum arvense chloroplast |
34 | NC_014699 | AAGA | 3 | 55893 | 55904 | 12 | Equisetum arvense chloroplast |
35 | NC_014807 | AAGA | 3 | 30164 | 30175 | 12 | Corynocarpus laevigata chloroplast |
36 | NC_014808 | AAGA | 3 | 58785 | 58796 | 12 | Thalassiosira oceanica CCMP1005 chloroplast |
37 | NC_015113 | AAGA | 3 | 48130 | 48141 | 12 | Anthriscus cerefolium chloroplast |
38 | NC_015308 | AAGA | 3 | 6957 | 6968 | 12 | Hevea brasiliensis chloroplast |
39 | NC_015359 | AAGA | 3 | 46456 | 46466 | 11 | Chlorella variabilis plastid |
40 | NC_015543 | AAGA | 3 | 68945 | 68956 | 12 | Jacobaea vulgaris chloroplast |
41 | NC_015621 | AAGA | 3 | 66248 | 66259 | 12 | Ageratina adenophora chloroplast |
42 | NC_015621 | AAGA | 3 | 69887 | 69898 | 12 | Ageratina adenophora chloroplast |
43 | NC_015621 | AAGA | 3 | 71743 | 71754 | 12 | Ageratina adenophora chloroplast |
44 | NC_015645 | AAGA | 3 | 151208 | 151218 | 11 | Schizomeris leibleinii chloroplast |
45 | NC_015803 | AAGA | 3 | 14880 | 14891 | 12 | Indocalamus longiauritus plastid |
46 | NC_015803 | AAGA | 3 | 41836 | 41847 | 12 | Indocalamus longiauritus plastid |
47 | NC_015817 | AAGA | 3 | 14882 | 14893 | 12 | Phyllostachys edulis chloroplast |
48 | NC_015817 | AAGA | 3 | 41771 | 41782 | 12 | Phyllostachys edulis chloroplast |
49 | NC_015820 | AAGA | 3 | 14896 | 14907 | 12 | Acidosasa purpurea chloroplast |
50 | NC_015820 | AAGA | 3 | 41859 | 41870 | 12 | Acidosasa purpurea chloroplast |
51 | NC_015826 | AAGA | 3 | 14875 | 14886 | 12 | Phyllostachys nigra var. henonis chloroplast |
52 | NC_015826 | AAGA | 3 | 41752 | 41763 | 12 | Phyllostachys nigra var. henonis chloroplast |
53 | NC_015830 | AAGA | 3 | 14458 | 14469 | 12 | Bambusa emeiensis chloroplast |
54 | NC_015830 | AAGA | 3 | 128646 | 128656 | 11 | Bambusa emeiensis chloroplast |
55 | NC_015831 | AAGA | 3 | 14897 | 14908 | 12 | Ferrocalamus rimosivaginus plastid |
56 | NC_015831 | AAGA | 3 | 41521 | 41532 | 12 | Ferrocalamus rimosivaginus plastid |
57 | NC_015891 | AAGA | 3 | 52082 | 52092 | 11 | Spirodela polyrhiza chloroplast |
58 | NC_015894 | AAGA | 3 | 8914 | 8925 | 12 | Wolffiella lingulata chloroplast |
59 | NC_015983 | AAGA | 3 | 117386 | 117396 | 11 | Cucumis melo subsp. melo chloroplast |
60 | NC_015990 | AAGA | 3 | 40944 | 40955 | 12 | Panicum virgatum chloroplast |
61 | NC_016065 | AAGA | 3 | 52948 | 52958 | 11 | Taiwania cryptomerioides chloroplast DNA |
62 | NC_016068 | AAGA | 3 | 448 | 459 | 12 | Nicotiana undulata chloroplast |
63 | NC_016430 | AAGA | 3 | 31042 | 31057 | 16 | Eleutherococcus senticosus chloroplast |
64 | NC_016430 | AAGA | 3 | 128618 | 128629 | 12 | Eleutherococcus senticosus chloroplast |
65 | NC_016433 | AAGA | 3 | 43564 | 43575 | 12 | Sesamum indicum chloroplast |
66 | NC_016468 | AAGA | 3 | 113507 | 113518 | 12 | Boea hygrometrica chloroplast |
67 | NC_016468 | AAGA | 3 | 118648 | 118659 | 12 | Boea hygrometrica chloroplast |
68 | NC_016677 | AAGA | 3 | 40530 | 40541 | 12 | Leersia tisserantii plastid |
69 | NC_016677 | AAGA | 3 | 43659 | 43669 | 11 | Leersia tisserantii plastid |
70 | NC_016699 | AAGA | 3 | 14877 | 14888 | 12 | Phyllostachys propinqua chloroplast |
71 | NC_016699 | AAGA | 3 | 41783 | 41794 | 12 | Phyllostachys propinqua chloroplast |
72 | NC_016708 | AAGA | 3 | 10015 | 10025 | 11 | Millettia pinnata chloroplast |
73 | NC_016718 | AAGA | 3 | 40412 | 40423 | 12 | Rhynchoryza subulata plastid |
74 | NC_016718 | AAGA | 3 | 43555 | 43565 | 11 | Rhynchoryza subulata plastid |
75 | NC_016727 | AAGA | 3 | 111969 | 111979 | 11 | Silene vulgaris chloroplast |
76 | NC_016728 | AAGA | 3 | 79843 | 79854 | 12 | Silene noctiflora chloroplast |
77 | NC_016728 | AAGA | 3 | 112878 | 112888 | 11 | Silene noctiflora chloroplast |
78 | NC_016729 | AAGA | 3 | 3962 | 3973 | 12 | Silene conica chloroplast |
79 | NC_016729 | AAGA | 3 | 110595 | 110605 | 11 | Silene conica chloroplast |
80 | NC_016730 | AAGA | 3 | 112128 | 112138 | 11 | Silene latifolia chloroplast |
81 | NC_016731 | AAGA | 3 | 95333 | 95344 | 12 | Synedra acus chloroplast |
82 | NC_016732 | AAGA | 3 | 220681 | 220692 | 12 | Dunaliella salina chloroplast |
83 | NC_016735 | AAGA | 3 | 12652 | 12663 | 12 | Fucus vesiculosus chloroplast |
84 | NC_016753 | AAGA | 3 | 42638 | 42649 | 12 | Colocasia esculenta chloroplast |
85 | NC_016753 | AAGA | 3 | 45844 | 45854 | 11 | Colocasia esculenta chloroplast |
86 | NC_016921 | AAGA | 3 | 127555 | 127566 | 12 | Pentactina rupicola chloroplast |
87 | NC_016927 | AAGA | 3 | 39239 | 39250 | 12 | Oryza meridionalis chloroplast |
88 | NC_016927 | AAGA | 3 | 42349 | 42359 | 11 | Oryza meridionalis chloroplast |
89 | NC_017006 | AAGA | 3 | 66741 | 66752 | 12 | Mankyua chejuensis chloroplast |
90 | NC_017602 | AAGA | 3 | 39936 | 39947 | 12 | Elaeis guineensis chloroplast |
91 | NC_017602 | AAGA | 3 | 71204 | 71214 | 11 | Elaeis guineensis chloroplast |
92 | NC_017609 | AAGA | 3 | 41359 | 41370 | 12 | Phalaenopsis equestris chloroplast |
93 | NC_017609 | AAGA | 3 | 44476 | 44486 | 11 | Phalaenopsis equestris chloroplast |
94 | NC_017835 | AAGA | 3 | 39232 | 39243 | 12 | Oryza rufipogon chloroplast |
95 | NC_017835 | AAGA | 3 | 42340 | 42350 | 11 | Oryza rufipogon chloroplast |
96 | NC_018114 | AAGA | 3 | 40751 | 40762 | 12 | Erycina pusilla chloroplast |
97 | NC_018114 | AAGA | 3 | 44012 | 44022 | 11 | Erycina pusilla chloroplast |
98 | NC_018523 | AAGA | 3 | 29852 | 29862 | 11 | Saccharina japonica chloroplast |
99 | NC_018523 | AAGA | 3 | 90327 | 90338 | 12 | Saccharina japonica chloroplast |
100 | NC_018541 | AAGA | 3 | 5387 | 5397 | 11 | Elodea canadensis chloroplast |
101 | NC_018565 | AAGA | 3 | 58468 | 58479 | 12 | Pachycladon enysii chloroplast |
102 | NC_019628 | AAGA | 3 | 66673 | 66684 | 12 | Pellia endiviifolia chloroplast |
103 | NC_019648 | AAGA | 3 | 14070 | 14081 | 12 | Festuca altissima plastid |
104 | NC_019648 | AAGA | 3 | 38991 | 39002 | 12 | Festuca altissima plastid |
105 | NC_019648 | AAGA | 3 | 67983 | 67994 | 12 | Festuca altissima plastid |
106 | NC_019649 | AAGA | 3 | 37905 | 37916 | 12 | Festuca ovina plastid |
107 | NC_019650 | AAGA | 3 | 14151 | 14162 | 12 | Festuca pratensis plastid |
108 | NC_019650 | AAGA | 3 | 38933 | 38944 | 12 | Festuca pratensis plastid |
109 | NC_019650 | AAGA | 3 | 68080 | 68091 | 12 | Festuca pratensis plastid |
110 | NC_019651 | AAGA | 3 | 14143 | 14154 | 12 | Lolium multiflorum plastid |
111 | NC_019651 | AAGA | 3 | 38861 | 38872 | 12 | Lolium multiflorum plastid |
112 | NC_019651 | AAGA | 3 | 68022 | 68033 | 12 | Lolium multiflorum plastid |
113 | NC_020014 | AAGA | 3 | 87499 | 87509 | 11 | Nannochloropsis gaditana chloroplast |
114 | NC_020018 | AAGA | 3 | 68101 | 68112 | 12 | Monomorphina aenigmatica strain UTEX1284 chloroplast |
115 | NC_020019 | AAGA | 3 | 128382 | 128393 | 12 | Camellia sinensis chloroplast |
116 | NC_020092 | AAGA | 3 | 68983 | 68993 | 11 | Chrysanthemum x morifolium chloroplast |
117 | NC_020152 | AAGA | 3 | 33227 | 33238 | 12 | Quercus rubra plastid |
118 | NC_020152 | AAGA | 3 | 132742 | 132753 | 12 | Quercus rubra plastid |
119 | NC_020320 | AAGA | 3 | 68934 | 68944 | 11 | Chrysanthemum indicum voucher HeN001 chloroplast |
120 | NC_020321 | AAGA | 3 | 16356 | 16367 | 12 | Taxus mairei voucher NN014 chloroplast |
121 | NC_020341 | AAGA | 3 | 14841 | 14852 | 12 | Arundinaria gigantea chloroplast |
122 | NC_020341 | AAGA | 3 | 41773 | 41784 | 12 | Arundinaria gigantea chloroplast |
123 | NC_020362 | AAGA | 3 | 43913 | 43924 | 12 | Heliconia collinsiana plastid |
124 | NC_020364 | AAGA | 3 | 39922 | 39933 | 12 | Pseudophoenix vinifera plastid |
125 | NC_020365 | AAGA | 3 | 39805 | 39816 | 12 | Calamus caryotoides plastid |
126 | NC_020365 | AAGA | 3 | 140908 | 140918 | 11 | Calamus caryotoides plastid |
127 | NC_020366 | AAGA | 3 | 40596 | 40607 | 12 | Bismarckia nobilis plastid |
128 | NC_020367 | AAGA | 3 | 41676 | 41687 | 12 | Dasypogon bromeliifolius plastid |
129 | NC_020438 | AAGA | 3 | 149895 | 149905 | 11 | Gonium pectorale chloroplast |
130 | NC_020607 | AAGA | 3 | 68928 | 68938 | 11 | Artemisia frigida chloroplast |
131 | NC_020607 | AAGA | 3 | 112804 | 112815 | 12 | Artemisia frigida chloroplast |
132 | NC_020607 | AAGA | 3 | 123375 | 123386 | 12 | Artemisia frigida chloroplast |
133 | NC_020795 | AAGA | 3 | 82683 | 82693 | 11 | Chondrus crispus plastid complete genome |
134 | NC_021075 | AAGA | 3 | 11677 | 11687 | 11 | Calliarthron tuberculosum chloroplast |
135 | NC_021075 | AAGA | 3 | 140404 | 140414 | 11 | Calliarthron tuberculosum chloroplast |
136 | NC_021101 | AAGA | 3 | 121370 | 121380 | 11 | Francoa sonchifolia plastid |
137 | NC_021102 | AAGA | 3 | 29819 | 29830 | 12 | Pachycladon cheesemanii chloroplast |
138 | NC_021109 | AAGA | 3 | 102021 | 102031 | 11 | Pleodorina starrii plastid |
139 | NC_021111 | AAGA | 3 | 26292 | 26303 | 12 | Cistanche deserticola chloroplast |
140 | NC_021189 | AAGA | 3 | 34001 | 34011 | 11 | Pyropia haitanensis voucher PH-38 chloroplast |
141 | NC_021372 | AAGA | 3 | 41568 | 41579 | 12 | Pharus latifolius chloroplast |
142 | NC_021423 | AAGA | 3 | 45478 | 45488 | 11 | Catharanthus roseus cultivar Pacifica Punch Halo chloroplast |
143 | NC_021423 | AAGA | 3 | 77115 | 77125 | 11 | Catharanthus roseus cultivar Pacifica Punch Halo chloroplast |
144 | NC_021425 | AAGA | 3 | 5204 | 5214 | 11 | Tetracentron sinense chloroplast |
145 | NC_021426 | AAGA | 3 | 3753 | 3764 | 12 | Trochodendron aralioides chloroplast |
146 | NC_021426 | AAGA | 3 | 5630 | 5640 | 11 | Trochodendron aralioides chloroplast |
147 | NC_021429 | AAGA | 3 | 40680 | 40691 | 12 | Cymbidium aloifolium voucher KUN:YJB100604 chloroplast |
148 | NC_021429 | AAGA | 3 | 122638 | 122649 | 12 | Cymbidium aloifolium voucher KUN:YJB100604 chloroplast |
149 | NC_021429 | AAGA | 3 | 125185 | 125196 | 12 | Cymbidium aloifolium voucher KUN:YJB100604 chloroplast |
150 | NC_021430 | AAGA | 3 | 40722 | 40733 | 12 | Cymbidium sinense voucher KUN:YJB100605 chloroplast |
151 | NC_021430 | AAGA | 3 | 121367 | 121378 | 12 | Cymbidium sinense voucher KUN:YJB100605 chloroplast |
152 | NC_021430 | AAGA | 3 | 123849 | 123860 | 12 | Cymbidium sinense voucher KUN:YJB100605 chloroplast |
153 | NC_021431 | AAGA | 3 | 40820 | 40831 | 12 | Cymbidium tortisepalum voucher KUN:HJL091027 chloroplast |
154 | NC_021431 | AAGA | 3 | 121455 | 121466 | 12 | Cymbidium tortisepalum voucher KUN:HJL091027 chloroplast |
155 | NC_021431 | AAGA | 3 | 123936 | 123947 | 12 | Cymbidium tortisepalum voucher KUN:HJL091027 chloroplast |
156 | NC_021432 | AAGA | 3 | 40237 | 40248 | 12 | Cymbidium tracyanum voucher KUN:YJB100606 chloroplast |
157 | NC_021432 | AAGA | 3 | 121961 | 121972 | 12 | Cymbidium tracyanum voucher KUN:YJB100606 chloroplast |
158 | NC_021432 | AAGA | 3 | 124585 | 124596 | 12 | Cymbidium tracyanum voucher KUN:YJB100606 chloroplast |
159 | NC_021433 | AAGA | 3 | 40568 | 40579 | 12 | Cymbidium mannii voucher KUN:YJB100602 chloroplast |
160 | NC_021433 | AAGA | 3 | 67729 | 67740 | 12 | Cymbidium mannii voucher KUN:YJB100602 chloroplast |
161 | NC_021433 | AAGA | 3 | 121649 | 121660 | 12 | Cymbidium mannii voucher KUN:YJB100602 chloroplast |
162 | NC_021433 | AAGA | 3 | 123963 | 123974 | 12 | Cymbidium mannii voucher KUN:YJB100602 chloroplast |
163 | NC_021437 | AAGA | 3 | 100593 | 100604 | 12 | Cunninghamia lanceolata chloroplast |
164 | NC_021438 | AAGA | 3 | 87138 | 87149 | 12 | Gnetum montanum chloroplast |
165 | NC_021441 | AAGA | 3 | 52969 | 52979 | 11 | Taiwania flousiana chloroplast |
166 | NC_021455 | AAGA | 3 | 117468 | 117479 | 12 | Prinsepia utilis plastid |
167 | NC_021618 | AAGA | 3 | 74769 | 74780 | 12 | Grateloupia taiwanensis plastid |
168 | NC_021618 | AAGA | 3 | 80203 | 80214 | 12 | Grateloupia taiwanensis plastid |
169 | NC_021618 | AAGA | 3 | 87680 | 87691 | 12 | Grateloupia taiwanensis plastid |
170 | NC_021618 | AAGA | 3 | 171539 | 171550 | 12 | Grateloupia taiwanensis plastid |
171 | NC_021636 | AAGA | 3 | 10326 | 10336 | 11 | Glycine tomentella voucher CSIRO:G1403 chloroplast |
172 | NC_021636 | AAGA | 3 | 24817 | 24827 | 11 | Glycine tomentella voucher CSIRO:G1403 chloroplast |
173 | NC_021636 | AAGA | 3 | 67574 | 67584 | 11 | Glycine tomentella voucher CSIRO:G1403 chloroplast |
174 | NC_021636 | AAGA | 3 | 69728 | 69738 | 11 | Glycine tomentella voucher CSIRO:G1403 chloroplast |
175 | NC_021645 | AAGA | 3 | 10195 | 10205 | 11 | Glycine cyrtoloba voucher CSIRO:G1267 chloroplast |
176 | NC_021645 | AAGA | 3 | 67353 | 67363 | 11 | Glycine cyrtoloba voucher CSIRO:G1267 chloroplast |
177 | NC_021645 | AAGA | 3 | 69534 | 69544 | 11 | Glycine cyrtoloba voucher CSIRO:G1267 chloroplast |
178 | NC_021646 | AAGA | 3 | 10180 | 10190 | 11 | Glycine stenophita voucher CSIRO:G1974 chloroplast |
179 | NC_021646 | AAGA | 3 | 67679 | 67689 | 11 | Glycine stenophita voucher CSIRO:G1974 chloroplast |
180 | NC_021646 | AAGA | 3 | 69851 | 69861 | 11 | Glycine stenophita voucher CSIRO:G1974 chloroplast |
181 | NC_021647 | AAGA | 3 | 10302 | 10312 | 11 | Glycine canescens voucher CSIRO:G1232 chloroplast |
182 | NC_021647 | AAGA | 3 | 24827 | 24837 | 11 | Glycine canescens voucher CSIRO:G1232 chloroplast |
183 | NC_021647 | AAGA | 3 | 67390 | 67400 | 11 | Glycine canescens voucher CSIRO:G1232 chloroplast |
184 | NC_021648 | AAGA | 3 | 10304 | 10314 | 11 | Glycine dolichocarpa voucher CSIRO:G1134 chloroplast |
185 | NC_021648 | AAGA | 3 | 24829 | 24839 | 11 | Glycine dolichocarpa voucher CSIRO:G1134 chloroplast |
186 | NC_021648 | AAGA | 3 | 67608 | 67618 | 11 | Glycine dolichocarpa voucher CSIRO:G1134 chloroplast |
187 | NC_021649 | AAGA | 3 | 10327 | 10337 | 11 | Glycine falcata voucher CSIRO:G1718 chloroplast |
188 | NC_021649 | AAGA | 3 | 24838 | 24848 | 11 | Glycine falcata voucher CSIRO:G1718 chloroplast |
189 | NC_021649 | AAGA | 3 | 67803 | 67813 | 11 | Glycine falcata voucher CSIRO:G1718 chloroplast |
190 | NC_021649 | AAGA | 3 | 69943 | 69953 | 11 | Glycine falcata voucher CSIRO:G1718 chloroplast |
191 | NC_021650 | AAGA | 3 | 10307 | 10317 | 11 | Glycine syndetika voucher CSIRO:G1300 chloroplast |
192 | NC_021650 | AAGA | 3 | 24826 | 24836 | 11 | Glycine syndetika voucher CSIRO:G1300 chloroplast |
193 | NC_021650 | AAGA | 3 | 67625 | 67635 | 11 | Glycine syndetika voucher CSIRO:G1300 chloroplast |
194 | NC_021760 | AAGA | 3 | 39404 | 39415 | 12 | Triticum monococcum chloroplast |
195 | NC_021761 | AAGA | 3 | 39470 | 39481 | 12 | Secale cereale chloroplast |
196 | NC_021762 | AAGA | 3 | 39382 | 39393 | 12 | Triticum urartu chloroplast |
197 | NC_021936 | AAGA | 3 | 8213 | 8224 | 12 | Najas flexilis chloroplast |
198 | NC_022099 | AAGA | 3 | 14944 | 14955 | 12 | Medicago truncatula cultivar Jemalong 2HA plastid |
199 | NC_022099 | AAGA | 3 | 103205 | 103216 | 12 | Medicago truncatula cultivar Jemalong 2HA plastid |
200 | NC_022100 | AAGA | 3 | 14962 | 14973 | 12 | Medicago truncatula cultivar Borung plastid |
201 | NC_022100 | AAGA | 3 | 103012 | 103023 | 12 | Medicago truncatula cultivar Borung plastid |
202 | NC_022133 | AAGA | 3 | 39298 | 39309 | 12 | Aegilops tauschii chloroplast |
203 | NC_022135 | AAGA | 3 | 39447 | 39458 | 12 | Aegilops speltoides isolate SPE0661 chloroplast |
204 | NC_022136 | AAGA | 3 | 32552 | 32562 | 11 | Lygodium japonicum chloroplast |
205 | NC_000927 | AAGA | 3 | 34728 | 34738 | 11 | Nephroselmis olivacea chloroplast |
206 | NC_000927 | AAGA | 3 | 44438 | 44448 | 11 | Nephroselmis olivacea chloroplast |
207 | NC_001320 | AAGA | 3 | 39236 | 39247 | 12 | Oryza sativa Japonica Group plastid |
208 | NC_001320 | AAGA | 3 | 42344 | 42354 | 11 | Oryza sativa Japonica Group plastid |
209 | NC_001603 | AAGA | 3 | 89006 | 89016 | 11 | Euglena gracilis chloroplast |
210 | NC_001666 | AAGA | 3 | 41590 | 41601 | 12 | Zea mays chloroplast |
211 | NC_001713 | AAGA | 3 | 45463 | 45473 | 11 | Odontella sinensis chloroplast |
212 | NC_001840 | AAGA | 3 | 25410 | 25420 | 11 | Cyanidium caldarium chloroplast |
213 | NC_001865 | AAGA | 3 | 40047 | 40057 | 11 | Chlorella vulgaris chloroplast |
214 | NC_001865 | AAGA | 3 | 74250 | 74260 | 11 | Chlorella vulgaris chloroplast |
215 | NC_001865 | AAGA | 3 | 135686 | 135696 | 11 | Chlorella vulgaris chloroplast |
216 | NC_001865 | AAGA | 3 | 140586 | 140597 | 12 | Chlorella vulgaris chloroplast |
217 | NC_001865 | AAGA | 3 | 146151 | 146162 | 12 | Chlorella vulgaris chloroplast |
218 | NC_001879 | AAGA | 3 | 438 | 449 | 12 | Nicotiana tabacum plastid |
219 | NC_002202 | AAGA | 3 | 28986 | 28996 | 11 | Spinacia oleracea plastid |
220 | NC_002693 | AAGA | 3 | 12328 | 12338 | 11 | Oenothera elata subsp. hookeri plastid plastome I |
221 | NC_002693 | AAGA | 3 | 76751 | 76762 | 12 | Oenothera elata subsp. hookeri plastid plastome I |
222 | NC_002693 | AAGA | 3 | 121605 | 121616 | 12 | Oenothera elata subsp. hookeri plastid plastome I |
223 | NC_002694 | AAGA | 3 | 65931 | 65941 | 11 | Lotus japonicus chloroplast |
224 | NC_002762 | AAGA | 3 | 39702 | 39713 | 12 | Triticum aestivum chloroplast |
225 | NC_003119 | AAGA | 3 | 14944 | 14955 | 12 | Medicago truncatula chloroplast |
226 | NC_003119 | AAGA | 3 | 103205 | 103216 | 12 | Medicago truncatula chloroplast |
227 | NC_003386 | AAGA | 3 | 11652 | 11662 | 11 | Psilotum nudum chloroplast |
228 | NC_004115 | AAGA | 3 | 59214 | 59225 | 12 | Chaetosphaeridium globosum chloroplast |
229 | NC_004115 | AAGA | 3 | 59813 | 59823 | 11 | Chaetosphaeridium globosum chloroplast |
230 | NC_004766 | AAGA | 3 | 53778 | 53789 | 12 | Adiantum capillus-veneris chloroplast |
231 | NC_004766 | AAGA | 3 | 56162 | 56173 | 12 | Adiantum capillus-veneris chloroplast |
232 | NC_004799 | AAGA | 3 | 139980 | 139990 | 11 | Cyanidioschyzon merolae strain 10D chloroplast |
233 | NC_004993 | AAGA | 3 | 119800 | 119810 | 11 | Calycanthus floridus var. glaucus chloroplast |
234 | NC_005878 | AAGA | 3 | 103768 | 103779 | 12 | Saccharum hybrid cultivar SP-80-3280 chloroplast |
235 | NC_005973 | AAGA | 3 | 39170 | 39181 | 12 | Oryza nivara chloroplast |
236 | NC_005973 | AAGA | 3 | 42279 | 42289 | 11 | Oryza nivara chloroplast |
237 | NC_006084 | AAGA | 3 | 42141 | 42152 | 12 | Saccharum hybrid cultivar NCo 310 chloroplast |
238 | NC_006137 | AAGA | 3 | 96876 | 96886 | 11 | Gracilaria tenuistipitata var. liui chloroplast |
239 | NC_006290 | AAGA | 3 | 30771 | 30786 | 16 | Panax ginseng chloroplast |
240 | NC_006290 | AAGA | 3 | 128061 | 128072 | 12 | Panax ginseng chloroplast |
241 | NC_007144 | AAGA | 3 | 117065 | 117075 | 11 | Cucumis sativus chloroplast |
242 | NC_007407 | AAGA | 3 | 68163 | 68174 | 12 | Acorus calamus plastid |
243 | NC_007407 | AAGA | 3 | 70680 | 70691 | 12 | Acorus calamus plastid |
244 | NC_007499 | AAGA | 3 | 41212 | 41223 | 12 | Phalaenopsis aphrodite subsp. formosana chloroplast |
245 | NC_007499 | AAGA | 3 | 44324 | 44334 | 11 | Phalaenopsis aphrodite subsp. formosana chloroplast |
246 | NC_007500 | AAGA | 3 | 438 | 449 | 12 | Nicotiana sylvestris chloroplast |
247 | NC_007578 | AAGA | 3 | 70174 | 70185 | 12 | Lactuca sativa chloroplast |
248 | NC_007578 | AAGA | 3 | 114184 | 114195 | 12 | Lactuca sativa chloroplast |
249 | NC_007932 | AAGA | 3 | 34082 | 34092 | 11 | Porphyra yezoensis chloroplast |
250 | NC_007932 | AAGA | 3 | 41168 | 41178 | 11 | Porphyra yezoensis chloroplast |
251 | NC_007942 | AAGA | 3 | 10319 | 10329 | 11 | Glycine max chloroplast |
252 | NC_007942 | AAGA | 3 | 24616 | 24626 | 11 | Glycine max chloroplast |
253 | NC_007942 | AAGA | 3 | 66829 | 66839 | 11 | Glycine max chloroplast |
254 | NC_007957 | AAGA | 3 | 9987 | 9998 | 12 | Vitis vinifera chloroplast |
255 | NC_007957 | AAGA | 3 | 75184 | 75195 | 12 | Vitis vinifera chloroplast |
256 | NC_007957 | AAGA | 3 | 126879 | 126890 | 12 | Vitis vinifera chloroplast |
257 | NC_007977 | AAGA | 3 | 65969 | 65980 | 12 | Helianthus annuus chloroplast |
258 | NC_007977 | AAGA | 3 | 69650 | 69661 | 12 | Helianthus annuus chloroplast |
259 | NC_008097 | AAGA | 3 | 14409 | 14420 | 12 | Chara vulgaris chloroplast |
260 | NC_008101 | AAGA | 3 | 151150 | 151161 | 12 | Scenedesmus obliquus chloroplast |
261 | NC_008115 | AAGA | 3 | 121435 | 121446 | 12 | Eucalyptus globulus subsp. globulus chloroplast |
262 | NC_008115 | AAGA | 3 | 131268 | 131279 | 12 | Eucalyptus globulus subsp. globulus chloroplast |
263 | NC_008155 | AAGA | 3 | 39196 | 39207 | 12 | Oryza sativa Indica Group chloroplast |
264 | NC_008155 | AAGA | 3 | 42305 | 42315 | 11 | Oryza sativa Indica Group chloroplast |
265 | NC_008325 | AAGA | 3 | 43348 | 43358 | 11 | Daucus carota chloroplast |
266 | NC_008336 | AAGA | 3 | 6839 | 6850 | 12 | Nandina domestica chloroplast |
267 | NC_008359 | AAGA | 3 | 144048 | 144059 | 12 | Morus indica chloroplast |
268 | NC_008372 | AAGA | 3 | 70944 | 70955 | 12 | Stigeoclonium helveticum chloroplast |
269 | NC_008454 | AAGA | 3 | 9495 | 9505 | 11 | Pelargonium x hortorum chloroplast |
270 | NC_008454 | AAGA | 3 | 33289 | 33299 | 11 | Pelargonium x hortorum chloroplast |
271 | NC_008454 | AAGA | 3 | 90133 | 90144 | 12 | Pelargonium x hortorum chloroplast |
272 | NC_008454 | AAGA | 3 | 137429 | 137440 | 12 | Pelargonium x hortorum chloroplast |
273 | NC_008454 | AAGA | 3 | 149423 | 149435 | 13 | Pelargonium x hortorum chloroplast |
274 | NC_008535 | AAGA | 3 | 10400 | 10411 | 12 | Coffea arabica chloroplast |
275 | NC_008535 | AAGA | 3 | 122217 | 122228 | 12 | Coffea arabica chloroplast |
276 | NC_008535 | AAGA | 3 | 126632 | 126643 | 12 | Coffea arabica chloroplast |
277 | NC_008589 | AAGA | 3 | 14567 | 14578 | 12 | Thalassiosira pseudonana chloroplast |
278 | NC_008590 | AAGA | 3 | 39866 | 39877 | 12 | Hordeum vulgare subsp. vulgare chloroplast |
279 | NC_008591 | AAGA | 3 | 39551 | 39562 | 12 | Agrostis stolonifera chloroplast |
280 | NC_008602 | AAGA | 3 | 42360 | 42371 | 12 | Sorghum bicolor chloroplast |
281 | NC_008796 | AAGA | 3 | 13012 | 13023 | 12 | Ranunculus macranthus chloroplast |
282 | NC_009259 | AAGA | 3 | 1280 | 1290 | 11 | Phaseolus vulgaris chloroplast |
283 | NC_009259 | AAGA | 3 | 13058 | 13068 | 11 | Phaseolus vulgaris chloroplast |
284 | NC_009259 | AAGA | 3 | 27514 | 27524 | 11 | Phaseolus vulgaris chloroplast |
285 | NC_009259 | AAGA | 3 | 53927 | 53937 | 11 | Phaseolus vulgaris chloroplast |
286 | NC_009267 | AAGA | 3 | 30180 | 30191 | 12 | Olimarabidopsis pumila chloroplast |
287 | NC_009268 | AAGA | 3 | 30213 | 30224 | 12 | Arabis hirsuta chloroplast |
288 | NC_009269 | AAGA | 3 | 30913 | 30924 | 12 | Barbarea verna chloroplast |
289 | NC_009270 | AAGA | 3 | 3413 | 3423 | 11 | Capsella bursa-pastoris chloroplast |
290 | NC_009273 | AAGA | 3 | 29944 | 29955 | 12 | Lepidium virginicum chloroplast |
291 | NC_009274 | AAGA | 3 | 29477 | 29488 | 12 | Lobularia maritima chloroplast |
292 | NC_009275 | AAGA | 3 | 30393 | 30404 | 12 | Nasturtium officinale chloroplast |
293 | NC_009599 | AAGA | 3 | 54417 | 54427 | 11 | Buxus microphylla chloroplast |
294 | NC_009601 | AAGA | 3 | 39427 | 39438 | 12 | Dioscorea elephantipes chloroplast |
295 | NC_009601 | AAGA | 3 | 69861 | 69871 | 11 | Dioscorea elephantipes chloroplast |
296 | NC_009618 | AAGA | 3 | 48413 | 48424 | 12 | Cycas taitungensis chloroplast |
297 | NC_009681 | AAGA | 3 | 72697 | 72708 | 12 | Leptosira terrestris chloroplast |
298 | NC_009681 | AAGA | 3 | 117661 | 117671 | 11 | Leptosira terrestris chloroplast |
299 | NC_009681 | AAGA | 3 | 133580 | 133590 | 11 | Leptosira terrestris chloroplast |
300 | NC_009766 | AAGA | 3 | 55834 | 55844 | 11 | Cuscuta reflexa chloroplast |
301 | NC_009808 | AAGA | 3 | 41413 | 41424 | 12 | Ipomoea purpurea chloroplast |
302 | NC_009808 | AAGA | 3 | 49318 | 49330 | 13 | Ipomoea purpurea chloroplast |
303 | NC_009950 | AAGA | 3 | 14181 | 14192 | 12 | Lolium perenne chloroplast |
304 | NC_009950 | AAGA | 3 | 38981 | 38992 | 12 | Lolium perenne chloroplast |
305 | NC_009950 | AAGA | 3 | 68131 | 68142 | 12 | Lolium perenne chloroplast |
306 | NC_010093 | AAGA | 3 | 67838 | 67849 | 12 | Acorus americanus chloroplast |
307 | NC_010093 | AAGA | 3 | 70356 | 70367 | 12 | Acorus americanus chloroplast |
308 | NC_010323 | AAGA | 3 | 72745 | 72756 | 12 | Carica papaya chloroplast |
309 | NC_010323 | AAGA | 3 | 117943 | 117954 | 12 | Carica papaya chloroplast |
310 | NC_010323 | AAGA | 3 | 131013 | 131024 | 12 | Carica papaya chloroplast |
311 | NC_010358 | AAGA | 3 | 11874 | 11884 | 11 | Oenothera argillicola chloroplast |
312 | NC_010358 | AAGA | 3 | 75701 | 75712 | 12 | Oenothera argillicola chloroplast |
313 | NC_010358 | AAGA | 3 | 120865 | 120876 | 12 | Oenothera argillicola chloroplast |
314 | NC_010360 | AAGA | 3 | 12243 | 12253 | 11 | Oenothera glazioviana chloroplast |
315 | NC_010360 | AAGA | 3 | 76886 | 76897 | 12 | Oenothera glazioviana chloroplast |
316 | NC_010360 | AAGA | 3 | 121498 | 121509 | 12 | Oenothera glazioviana chloroplast |
317 | NC_010361 | AAGA | 3 | 12321 | 12331 | 11 | Oenothera biennis chloroplast |
318 | NC_010361 | AAGA | 3 | 76284 | 76295 | 12 | Oenothera biennis chloroplast |
319 | NC_010361 | AAGA | 3 | 120984 | 120995 | 12 | Oenothera biennis chloroplast |
320 | NC_010362 | AAGA | 3 | 12125 | 12135 | 11 | Oenothera parviflora chloroplast |
321 | NC_010362 | AAGA | 3 | 75039 | 75050 | 12 | Oenothera parviflora chloroplast |
322 | NC_010362 | AAGA | 3 | 119697 | 119708 | 12 | Oenothera parviflora chloroplast |
323 | NC_010548 | AAGA | 3 | 28078 | 28088 | 11 | Cryptomeria japonica chloroplast |
324 | NC_010548 | AAGA | 3 | 91904 | 91915 | 12 | Cryptomeria japonica chloroplast |
325 | NC_010548 | AAGA | 3 | 94728 | 94738 | 11 | Cryptomeria japonica chloroplast |
326 | NC_010601 | AAGA | 3 | 65998 | 66009 | 12 | Guizotia abyssinica chloroplast |
327 | NC_010601 | AAGA | 3 | 67823 | 67834 | 12 | Guizotia abyssinica chloroplast |
328 | NC_010654 | AAGA | 3 | 40033 | 40044 | 12 | Welwitschia mirabilis chloroplast |
329 | NC_010654 | AAGA | 3 | 42435 | 42446 | 12 | Welwitschia mirabilis chloroplast |
330 | NC_010654 | AAGA | 3 | 50989 | 51000 | 12 | Welwitschia mirabilis chloroplast |
331 | NC_010772 | AAGA | 3 | 72112 | 72124 | 13 | Heterosigma akashiwo chloroplast |
332 | NC_010776 | AAGA | 3 | 6801 | 6811 | 11 | Fagopyrum esculentum subsp. ancestrale chloroplast |
333 | NC_010776 | AAGA | 3 | 13879 | 13889 | 11 | Fagopyrum esculentum subsp. ancestrale chloroplast |
334 | NC_010776 | AAGA | 3 | 130896 | 130907 | 12 | Fagopyrum esculentum subsp. ancestrale chloroplast |
335 | NC_011032 | AAGA | 3 | 39029 | 39040 | 12 | Brachypodium distachyon chloroplast |
336 | NC_011713 | AAGA | 3 | 14181 | 14192 | 12 | Festuca arundinacea chloroplast |
337 | NC_011713 | AAGA | 3 | 39351 | 39362 | 12 | Festuca arundinacea chloroplast |
338 | NC_011828 | AAGA | 3 | 54023 | 54034 | 12 | Trifolium subterraneum chloroplast |
339 | NC_011828 | AAGA | 3 | 86016 | 86027 | 12 | Trifolium subterraneum chloroplast |
340 | NC_011942 | AAGA | 3 | 66136 | 66147 | 12 | Gnetum parvifolium chloroplast |
341 | NC_011954 | AAGA | 3 | 45405 | 45416 | 12 | Ephedra equisetina chloroplast |
342 | NC_012052 | AAGA | 3 | 114000 | 114011 | 12 | Syntrichia ruralis chloroplast |
343 | NC_012818 | AAGA | 3 | 9531 | 9542 | 12 | Alsophila spinulosa chloroplast |
344 | NC_012927 | AAGA | 3 | 14412 | 14423 | 12 | Bambusa oldhamii chloroplast |
345 | NC_012978 | AAGA | 3 | 7294 | 7304 | 11 | Parachlorella kessleri chloroplast |
346 | NC_013088 | AAGA | 3 | 14443 | 14454 | 12 | Dendrocalamus latiflorus chloroplast |
347 | NC_013088 | AAGA | 3 | 44591 | 44601 | 11 | Dendrocalamus latiflorus chloroplast |
348 | NC_013088 | AAGA | 3 | 128587 | 128597 | 11 | Dendrocalamus latiflorus chloroplast |
349 | NC_013273 | AAGA | 3 | 41850 | 41861 | 12 | Coix lacryma-jobi chloroplast |
350 | NC_013359 | AAGA | 3 | 27315 | 27326 | 12 | Bryopsis hypnoides chloroplast |
351 | NC_013359 | AAGA | 3 | 53205 | 53216 | 12 | Bryopsis hypnoides chloroplast |
352 | NC_013498 | AAGA | 3 | 57300 | 57310 | 11 | Ectocarpus siliculosus chloroplast |
353 | NC_013553 | AAGA | 3 | 66900 | 66911 | 12 | Parthenium argentatum chloroplast |
354 | NC_013553 | AAGA | 3 | 70609 | 70620 | 12 | Parthenium argentatum chloroplast |
355 | NC_013823 | AAGA | 3 | 45615 | 45625 | 11 | Typha latifolia chloroplast |
356 | NC_013991 | AAGA | 3 | 40355 | 40366 | 12 | Phoenix dactylifera chloroplast |
357 | NC_014056 | AAGA | 3 | 4483 | 4493 | 11 | Oncidium Gower Ramsey chloroplast |
358 | NC_014056 | AAGA | 3 | 39328 | 39339 | 12 | Oncidium Gower Ramsey chloroplast |
359 | NC_014056 | AAGA | 3 | 42531 | 42541 | 11 | Oncidium Gower Ramsey chloroplast |
360 | NC_014056 | AAGA | 3 | 63287 | 63299 | 13 | Oncidium Gower Ramsey chloroplast |
361 | NC_014057 | AAGA | 3 | 8749 | 8759 | 11 | Pisum sativum chloroplast |
362 | NC_014057 | AAGA | 3 | 31906 | 31917 | 12 | Pisum sativum chloroplast |
363 | NC_014062 | AAGA | 3 | 41365 | 41376 | 12 | Anomochloa marantoidea chloroplast |
364 | NC_014062 | AAGA | 3 | 48239 | 48250 | 12 | Anomochloa marantoidea chloroplast |
365 | NC_014063 | AAGA | 3 | 56184 | 56195 | 12 | Lathyrus sativus chloroplast |