Chloroplast Motifs - Imperfect TGC Repeats
| S.No | Sequence ID | Motif | Iterations | Start | End | Tract Length | Sequence Name |
| 1 | NC_013086 | TGC | 10 | 61514 | 61543 | 30 | Selaginella moellendorffii plastid |
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| 2 | NC_000926 | TGC | 7 | 46986 | 47006 | 21 | Guillardia theta chloroplast |
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| 3 | NC_013086 | TGC | 7 | 93597 | 93617 | 21 | Selaginella moellendorffii plastid |
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| 4 | NC_016731 | TGC | 5 | 15873 | 15887 | 15 | Synedra acus chloroplast |
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| 5 | NC_018569 | TGC | 5 | 52191 | 52205 | 15 | Trebouxiophyceae sp. MX-AZ01 chloroplast |
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| 6 | NC_020438 | TGC | 5 | 95901 | 95915 | 15 | Gonium pectorale chloroplast |
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| 7 | NC_021109 | TGC | 5 | 140807 | 140820 | 14 | Pleodorina starrii plastid |
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| 8 | NC_001319 | TGC | 5 | 28820 | 28834 | 15 | Marchantia polymorpha chloroplast |
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| 9 | NC_005353 | TGC | 5 | 188335 | 188349 | 15 | Chlamydomonas reinhardtii chloroplast |
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| 10 | NC_007288 | TGC | 5 | 75551 | 75565 | 15 | Emiliania huxleyi chloroplast |
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| 11 | NC_008097 | TGC | 5 | 157546 | 157560 | 15 | Chara vulgaris chloroplast |
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| 12 | NC_008101 | TGC | 5 | 72474 | 72488 | 15 | Scenedesmus obliquus chloroplast |
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| 13 | NC_011600 | TGC | 5 | 28468 | 28482 | 15 | Vaucheria litorea chloroplast |
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| 14 | NC_011087 | TGC | 4 | 34422 | 34433 | 12 | Paulinella chromatophora chromatophore |
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| 15 | NC_011087 | TGC | 4 | 74317 | 74328 | 12 | Paulinella chromatophora chromatophore |
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| 16 | NC_011087 | TGC | 4 | 579808 | 579819 | 12 | Paulinella chromatophora chromatophore |
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| 17 | NC_011087 | TGC | 4 | 602003 | 602014 | 12 | Paulinella chromatophora chromatophore |
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| 18 | NC_011087 | TGC | 4 | 851120 | 851131 | 12 | Paulinella chromatophora chromatophore |
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| 19 | NC_011087 | TGC | 4 | 852818 | 852828 | 11 | Paulinella chromatophora chromatophore |
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| 20 | NC_011087 | TGC | 4 | 985947 | 985958 | 12 | Paulinella chromatophora chromatophore |
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| 21 | NC_011087 | TGC | 4 | 1006548 | 1006559 | 12 | Paulinella chromatophora chromatophore |
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| 22 | NC_011087 | TGC | 4 | 1016503 | 1016514 | 12 | Paulinella chromatophora chromatophore |
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| 23 | NC_014340 | TGC | 4 | 84377 | 84388 | 12 | Chromera velia strain CCMP2878 chloroplast |
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| 24 | NC_014346 | TGC | 4 | 24783 | 24794 | 12 | Floydiella terrestris chloroplast |
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| 25 | NC_014346 | TGC | 4 | 224977 | 224987 | 11 | Floydiella terrestris chloroplast |
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| 26 | NC_014592 | TGC | 4 | 77735 | 77746 | 12 | Cheilanthes lindheimeri chloroplast |
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| 27 | NC_014808 | TGC | 4 | 45582 | 45593 | 12 | Thalassiosira oceanica CCMP1005 chloroplast |
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| 28 | NC_015084 | TGC | 4 | 39065 | 39076 | 12 | Coccomyxa sp. C-169 plastid |
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| 29 | NC_015206 | TGC | 4 | 35981 | 35992 | 12 | Fragaria vesca subsp. vesca chloroplast |
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| 30 | NC_015359 | TGC | 4 | 98558 | 98569 | 12 | Chlorella variabilis plastid |
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| 31 | NC_015359 | TGC | 4 | 117338 | 117348 | 11 | Chlorella variabilis plastid |
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| 32 | NC_015402 | TGC | 4 | 29504 | 29515 | 12 | Ptilidium pulcherrimum chloroplast |
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| 33 | NC_015402 | TGC | 4 | 40596 | 40607 | 12 | Ptilidium pulcherrimum chloroplast |
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| 34 | NC_015403 | TGC | 4 | 75851 | 75862 | 12 | Fistulifera sp. JPCC DA0580 chloroplast |
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| 35 | NC_015645 | TGC | 4 | 93739 | 93750 | 12 | Schizomeris leibleinii chloroplast |
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| 36 | NC_015803 | TGC | 4 | 34633 | 34644 | 12 | Indocalamus longiauritus plastid |
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| 37 | NC_015817 | TGC | 4 | 34567 | 34578 | 12 | Phyllostachys edulis chloroplast |
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| 38 | NC_015820 | TGC | 4 | 34654 | 34665 | 12 | Acidosasa purpurea chloroplast |
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| 39 | NC_015826 | TGC | 4 | 34548 | 34559 | 12 | Phyllostachys nigra var. henonis chloroplast |
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| 40 | NC_015830 | TGC | 4 | 34206 | 34217 | 12 | Bambusa emeiensis chloroplast |
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| 41 | NC_015831 | TGC | 4 | 34313 | 34324 | 12 | Ferrocalamus rimosivaginus plastid |
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| 42 | NC_015891 | TGC | 4 | 44881 | 44893 | 13 | Spirodela polyrhiza chloroplast |
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| 43 | NC_015990 | TGC | 4 | 33715 | 33726 | 12 | Panicum virgatum chloroplast |
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| 44 | NC_016058 | TGC | 4 | 43681 | 43691 | 11 | Larix decidua chloroplast |
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| 45 | NC_016471 | TGC | 4 | 8603 | 8614 | 12 | Neottia nidus-avis plastid |
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| 46 | NC_016677 | TGC | 4 | 33335 | 33346 | 12 | Leersia tisserantii plastid |
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| 47 | NC_016699 | TGC | 4 | 34579 | 34590 | 12 | Phyllostachys propinqua chloroplast |
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| 48 | NC_016703 | TGC | 4 | 79872 | 79882 | 11 | Phaeocystis antarctica strain CCMP1374 plastid |
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| 49 | NC_016718 | TGC | 4 | 33208 | 33219 | 12 | Rhynchoryza subulata plastid |
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| 50 | NC_016731 | TGC | 4 | 94953 | 94964 | 12 | Synedra acus chloroplast |
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| 51 | NC_016732 | TGC | 4 | 70025 | 70036 | 12 | Dunaliella salina chloroplast |
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| 52 | NC_016732 | TGC | 4 | 122861 | 122872 | 12 | Dunaliella salina chloroplast |
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| 53 | NC_016732 | TGC | 4 | 146740 | 146751 | 12 | Dunaliella salina chloroplast |
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| 54 | NC_016735 | TGC | 4 | 49522 | 49533 | 12 | Fucus vesiculosus chloroplast |
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| 55 | NC_016735 | TGC | 4 | 73907 | 73918 | 12 | Fucus vesiculosus chloroplast |
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| 56 | NC_016927 | TGC | 4 | 32056 | 32067 | 12 | Oryza meridionalis chloroplast |
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| 57 | NC_017609 | TGC | 4 | 16726 | 16737 | 12 | Phalaenopsis equestris chloroplast |
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| 58 | NC_017835 | TGC | 4 | 32048 | 32059 | 12 | Oryza rufipogon chloroplast |
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| 59 | NC_018114 | TGC | 4 | 15951 | 15962 | 12 | Erycina pusilla chloroplast |
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| 60 | NC_018523 | TGC | 4 | 50042 | 50053 | 12 | Saccharina japonica chloroplast |
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| 61 | NC_018541 | TGC | 4 | 41524 | 41534 | 11 | Elodea canadensis chloroplast |
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| 62 | NC_018569 | TGC | 4 | 18746 | 18757 | 12 | Trebouxiophyceae sp. MX-AZ01 chloroplast |
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| 63 | NC_018569 | TGC | 4 | 63832 | 63843 | 12 | Trebouxiophyceae sp. MX-AZ01 chloroplast |
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| 64 | NC_018569 | TGC | 4 | 99072 | 99083 | 12 | Trebouxiophyceae sp. MX-AZ01 chloroplast |
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| 65 | NC_018569 | TGC | 4 | 137927 | 137937 | 11 | Trebouxiophyceae sp. MX-AZ01 chloroplast |
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| 66 | NC_018766 | TGC | 4 | 35996 | 36007 | 12 | Fragaria vesca subsp. bracteata chloroplast |
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| 67 | NC_018767 | TGC | 4 | 35981 | 35992 | 12 | Fragaria mandshurica plastid |
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| 68 | NC_019601 | TGC | 4 | 35935 | 35946 | 12 | Fragaria chiloensis chloroplast |
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| 69 | NC_019602 | TGC | 4 | 35934 | 35945 | 12 | Fragaria virginiana chloroplast |
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| 70 | NC_019628 | TGC | 4 | 29824 | 29835 | 12 | Pellia endiviifolia chloroplast |
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| 71 | NC_019628 | TGC | 4 | 41857 | 41868 | 12 | Pellia endiviifolia chloroplast |
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| 72 | NC_019648 | TGC | 4 | 31795 | 31806 | 12 | Festuca altissima plastid |
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| 73 | NC_019649 | TGC | 4 | 30928 | 30939 | 12 | Festuca ovina plastid |
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| 74 | NC_019650 | TGC | 4 | 31752 | 31763 | 12 | Festuca pratensis plastid |
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| 75 | NC_019651 | TGC | 4 | 31680 | 31691 | 12 | Lolium multiflorum plastid |
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| 76 | NC_020014 | TGC | 4 | 73751 | 73762 | 12 | Nannochloropsis gaditana chloroplast |
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| 77 | NC_020341 | TGC | 4 | 34566 | 34577 | 12 | Arundinaria gigantea chloroplast |
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| 78 | NC_020371 | TGC | 4 | 9277 | 9287 | 11 | Pavlova lutheri chloroplast |
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| 79 | NC_020795 | TGC | 4 | 5634 | 5645 | 12 | Chondrus crispus plastid complete genome |
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| 80 | NC_020795 | TGC | 4 | 155687 | 155698 | 12 | Chondrus crispus plastid complete genome |
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| 81 | NC_021075 | TGC | 4 | 70301 | 70312 | 12 | Calliarthron tuberculosum chloroplast |
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| 82 | NC_021109 | TGC | 4 | 141331 | 141341 | 11 | Pleodorina starrii plastid |
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| 83 | NC_021189 | TGC | 4 | 69644 | 69654 | 11 | Pyropia haitanensis voucher PH-38 chloroplast |
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| 84 | NC_021429 | TGC | 4 | 15703 | 15714 | 12 | Cymbidium aloifolium voucher KUN:YJB100604 chloroplast |
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| 85 | NC_021430 | TGC | 4 | 15676 | 15687 | 12 | Cymbidium sinense voucher KUN:YJB100605 chloroplast |
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| 86 | NC_021431 | TGC | 4 | 15750 | 15761 | 12 | Cymbidium tortisepalum voucher KUN:HJL091027 chloroplast |
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| 87 | NC_021432 | TGC | 4 | 15426 | 15437 | 12 | Cymbidium tracyanum voucher KUN:YJB100606 chloroplast |
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| 88 | NC_021433 | TGC | 4 | 15629 | 15640 | 12 | Cymbidium mannii voucher KUN:YJB100602 chloroplast |
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| 89 | NC_021618 | TGC | 4 | 12127 | 12138 | 12 | Grateloupia taiwanensis plastid |
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| 90 | NC_021637 | TGC | 4 | 81739 | 81749 | 11 | Phaeocystis globosa strain Pg-G(A) chloroplast |
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| 91 | NC_021760 | TGC | 4 | 32208 | 32219 | 12 | Triticum monococcum chloroplast |
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| 92 | NC_021761 | TGC | 4 | 32276 | 32287 | 12 | Secale cereale chloroplast |
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| 93 | NC_021762 | TGC | 4 | 32197 | 32208 | 12 | Triticum urartu chloroplast |
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| 94 | NC_022133 | TGC | 4 | 32111 | 32122 | 12 | Aegilops tauschii chloroplast |
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| 95 | NC_022135 | TGC | 4 | 32250 | 32261 | 12 | Aegilops speltoides isolate SPE0661 chloroplast |
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| 96 | NC_000925 | TGC | 4 | 69521 | 69531 | 11 | Porphyra purpurea chloroplast |
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| 97 | NC_000925 | TGC | 4 | 74986 | 74998 | 13 | Porphyra purpurea chloroplast |
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| 98 | NC_001319 | TGC | 4 | 41210 | 41221 | 12 | Marchantia polymorpha chloroplast |
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| 99 | NC_001320 | TGC | 4 | 32053 | 32064 | 12 | Oryza sativa Japonica Group plastid |
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| 100 | NC_001603 | TGC | 4 | 26125 | 26136 | 12 | Euglena gracilis chloroplast |
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| 101 | NC_001666 | TGC | 4 | 34395 | 34406 | 12 | Zea mays chloroplast |
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| 102 | NC_002186 | TGC | 4 | 2701 | 2712 | 12 | Mesostigma viride chloroplast |
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| 103 | NC_002694 | TGC | 4 | 20216 | 20227 | 12 | Lotus japonicus chloroplast |
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| 104 | NC_002762 | TGC | 4 | 32517 | 32528 | 12 | Triticum aestivum chloroplast |
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| 105 | NC_004115 | TGC | 4 | 51359 | 51370 | 12 | Chaetosphaeridium globosum chloroplast |
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| 106 | NC_004799 | TGC | 4 | 34563 | 34574 | 12 | Cyanidioschyzon merolae strain 10D chloroplast |
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| 107 | NC_005087 | TGC | 4 | 82568 | 82579 | 12 | Physcomitrella patens subsp. patens chloroplast |
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| 108 | NC_005878 | TGC | 4 | 96520 | 96531 | 12 | Saccharum hybrid cultivar SP-80-3280 chloroplast |
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| 109 | NC_005973 | TGC | 4 | 31987 | 31998 | 12 | Oryza nivara chloroplast |
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| 110 | NC_006084 | TGC | 4 | 34893 | 34904 | 12 | Saccharum hybrid cultivar NCo 310 chloroplast |
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| 111 | NC_006137 | TGC | 4 | 160648 | 160659 | 12 | Gracilaria tenuistipitata var. liui chloroplast |
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| 112 | NC_007499 | TGC | 4 | 16652 | 16663 | 12 | Phalaenopsis aphrodite subsp. formosana chloroplast |
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| 113 | NC_008114 | TGC | 4 | 119058 | 119069 | 12 | Pseudendoclonium akinetum chloroplast |
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| 114 | NC_008116 | TGC | 4 | 117174 | 117185 | 12 | Staurastrum punctulatum chloroplast |
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| 115 | NC_008155 | TGC | 4 | 32013 | 32024 | 12 | Oryza sativa Indica Group chloroplast |
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| 116 | NC_008289 | TGC | 4 | 54583 | 54594 | 12 | Ostreococcus tauri chloroplast |
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| 117 | NC_008335 | TGC | 4 | 37751 | 37761 | 11 | Platanus occidentalis chloroplast |
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| 118 | NC_008454 | TGC | 4 | 47952 | 47963 | 12 | Pelargonium x hortorum chloroplast |
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| 119 | NC_008590 | TGC | 4 | 32673 | 32684 | 12 | Hordeum vulgare subsp. vulgare chloroplast |
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| 120 | NC_008591 | TGC | 4 | 32362 | 32373 | 12 | Agrostis stolonifera chloroplast |
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| 121 | NC_008602 | TGC | 4 | 35130 | 35141 | 12 | Sorghum bicolor chloroplast |
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| 122 | NC_008822 | TGC | 4 | 100555 | 100566 | 12 | Chlorokybus atmophyticus chloroplast |
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| 123 | NC_009681 | TGC | 4 | 156650 | 156661 | 12 | Leptosira terrestris chloroplast |
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| 124 | NC_009950 | TGC | 4 | 31752 | 31763 | 12 | Lolium perenne chloroplast |
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| 125 | NC_010323 | TGC | 4 | 37308 | 37319 | 12 | Carica papaya chloroplast |
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| 126 | NC_010359 | TGC | 4 | 73213 | 73224 | 12 | Aneura mirabilis chloroplast |
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| 127 | NC_011031 | TGC | 4 | 21654 | 21665 | 12 | Oedogonium cardiacum chloroplast |
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| 128 | NC_011032 | TGC | 4 | 31925 | 31936 | 12 | Brachypodium distachyon chloroplast |
|---|
| 129 | NC_011163 | TGC | 4 | 20226 | 20237 | 12 | Cicer arietinum chloroplast |
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| 130 | NC_011713 | TGC | 4 | 32086 | 32097 | 12 | Festuca arundinacea chloroplast |
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| 131 | NC_011954 | TGC | 4 | 46098 | 46109 | 12 | Ephedra equisetina chloroplast |
|---|
| 132 | NC_012097 | TGC | 4 | 76812 | 76822 | 11 | Pycnococcus provasolii chloroplast |
|---|
| 133 | NC_012101 | TGC | 4 | 8173 | 8184 | 12 | Monomastix sp. OKE-1 chloroplast |
|---|
| 134 | NC_012224 | TGC | 4 | 37823 | 37833 | 11 | Jatropha curcas chloroplast |
|---|
| 135 | NC_012575 | TGC | 4 | 4305 | 4316 | 12 | Micromonas sp. RCC299 chloroplast |
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| 136 | NC_012575 | TGC | 4 | 36555 | 36566 | 12 | Micromonas sp. RCC299 chloroplast |
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| 137 | NC_012898 | TGC | 4 | 25797 | 25808 | 12 | Aureococcus anophagefferens chloroplast |
|---|
| 138 | NC_012898 | TGC | 4 | 60792 | 60803 | 12 | Aureococcus anophagefferens chloroplast |
|---|
| 139 | NC_012898 | TGC | 4 | 86337 | 86348 | 12 | Aureococcus anophagefferens chloroplast |
|---|
| 140 | NC_012927 | TGC | 4 | 34094 | 34105 | 12 | Bambusa oldhamii chloroplast |
|---|
| 141 | NC_012978 | TGC | 4 | 98011 | 98022 | 12 | Parachlorella kessleri chloroplast |
|---|
| 142 | NC_013088 | TGC | 4 | 34247 | 34258 | 12 | Dendrocalamus latiflorus chloroplast |
|---|
| 143 | NC_013273 | TGC | 4 | 34750 | 34761 | 12 | Coix lacryma-jobi chloroplast |
|---|
| 144 | NC_013703 | TGC | 4 | 2232 | 2242 | 11 | Cryptomonas paramecium plastid |
|---|
| 145 | NC_014056 | TGC | 4 | 15150 | 15161 | 12 | Oncidium Gower Ramsey chloroplast |
|---|
| 146 | NC_014056 | TGC | 4 | 33283 | 33293 | 11 | Oncidium Gower Ramsey chloroplast |
|---|
| 147 | NC_014063 | TGC | 4 | 19362 | 19373 | 12 | Lathyrus sativus chloroplast |
|---|
| 148 | NC_014063 | TGC | 4 | 61250 | 61261 | 12 | Lathyrus sativus chloroplast |
|---|