Chloroplast Motifs - Imperfect TGTA Repeats
S.No | Sequence ID | Motif | Iterations | Start | End | Tract Length | Sequence Name |
---|---|---|---|---|---|---|---|
1 | NC_008117 | TGTA | 9 | 45234 | 45269 | 36 | Zygnema circumcarinatum chloroplast |
2 | NC_008117 | TGTA | 6 | 67957 | 67979 | 23 | Zygnema circumcarinatum chloroplast |
3 | NC_009681 | TGTA | 5 | 105428 | 105448 | 21 | Leptosira terrestris chloroplast |
4 | NC_015083 | TGTA | 4 | 4595 | 4610 | 16 | Erodium carvifolium chloroplast |
5 | NC_020364 | TGTA | 4 | 78692 | 78707 | 16 | Pseudophoenix vinifera plastid |
6 | NC_008097 | TGTA | 4 | 98483 | 98498 | 16 | Chara vulgaris chloroplast |
7 | NC_014287 | TGTA | 3 | 83526 | 83536 | 11 | Durinskia baltica chloroplast |
8 | NC_015402 | TGTA | 3 | 31131 | 31142 | 12 | Ptilidium pulcherrimum chloroplast |
9 | NC_015543 | TGTA | 3 | 35015 | 35025 | 11 | Jacobaea vulgaris chloroplast |
10 | NC_015605 | TGTA | 3 | 50785 | 50796 | 12 | Nelumbo lutea chloroplast |
11 | NC_015610 | TGTA | 3 | 50746 | 50757 | 12 | Nelumbo nucifera chloroplast |
12 | NC_015621 | TGTA | 3 | 35329 | 35339 | 11 | Ageratina adenophora chloroplast |
13 | NC_015892 | TGTA | 3 | 33745 | 33756 | 12 | Magnolia kwangsiensis chloroplast |
14 | NC_016430 | TGTA | 3 | 38178 | 38188 | 11 | Eleutherococcus senticosus chloroplast |
15 | NC_016471 | TGTA | 3 | 35457 | 35468 | 12 | Neottia nidus-avis plastid |
16 | NC_016728 | TGTA | 3 | 51101 | 51111 | 11 | Silene noctiflora chloroplast |
17 | NC_018357 | TGTA | 3 | 33823 | 33834 | 12 | Magnolia denudata chloroplast |
18 | NC_020014 | TGTA | 3 | 22690 | 22701 | 12 | Nannochloropsis gaditana chloroplast |
19 | NC_020092 | TGTA | 3 | 35117 | 35127 | 11 | Chrysanthemum x morifolium chloroplast |
20 | NC_020316 | TGTA | 3 | 33937 | 33948 | 12 | Magnolia officinalis chloroplast |
21 | NC_020317 | TGTA | 3 | 33928 | 33939 | 12 | Magnolia officinalis subsp. biloba voucher SC001 chloroplast |
22 | NC_020318 | TGTA | 3 | 33553 | 33564 | 12 | Magnolia grandiflora voucher NJ016 chloroplast |
23 | NC_020320 | TGTA | 3 | 35131 | 35141 | 11 | Chrysanthemum indicum voucher HeN001 chloroplast |
24 | NC_020363 | TGTA | 3 | 85704 | 85715 | 12 | Zingiber spectabile plastid |
25 | NC_020607 | TGTA | 3 | 35134 | 35144 | 11 | Artemisia frigida chloroplast |
26 | NC_021109 | TGTA | 3 | 259787 | 259798 | 12 | Pleodorina starrii plastid |
27 | NC_021189 | TGTA | 3 | 179979 | 179989 | 11 | Pyropia haitanensis voucher PH-38 chloroplast |
28 | NC_021936 | TGTA | 3 | 5396 | 5407 | 12 | Najas flexilis chloroplast |
29 | NC_000925 | TGTA | 3 | 72064 | 72074 | 11 | Porphyra purpurea chloroplast |
30 | NC_001603 | TGTA | 3 | 31394 | 31405 | 12 | Euglena gracilis chloroplast |
31 | NC_001603 | TGTA | 3 | 52153 | 52163 | 11 | Euglena gracilis chloroplast |
32 | NC_002694 | TGTA | 3 | 5067 | 5077 | 11 | Lotus japonicus chloroplast |
33 | NC_004799 | TGTA | 3 | 101333 | 101344 | 12 | Cyanidioschyzon merolae strain 10D chloroplast |
34 | NC_006050 | TGTA | 3 | 50034 | 50045 | 12 | Nymphaea alba chloroplast |
35 | NC_006137 | TGTA | 3 | 132687 | 132698 | 12 | Gracilaria tenuistipitata var. liui chloroplast |
36 | NC_006137 | TGTA | 3 | 138984 | 138996 | 13 | Gracilaria tenuistipitata var. liui chloroplast |
37 | NC_006290 | TGTA | 3 | 37866 | 37876 | 11 | Panax ginseng chloroplast |
38 | NC_007288 | TGTA | 3 | 53576 | 53588 | 13 | Emiliania huxleyi chloroplast |
39 | NC_007407 | TGTA | 3 | 31803 | 31814 | 12 | Acorus calamus plastid |
40 | NC_007578 | TGTA | 3 | 35454 | 35464 | 11 | Lactuca sativa chloroplast |
41 | NC_007932 | TGTA | 3 | 170921 | 170932 | 12 | Porphyra yezoensis chloroplast |
42 | NC_007977 | TGTA | 3 | 35515 | 35525 | 11 | Helianthus annuus chloroplast |
43 | NC_008097 | TGTA | 3 | 155331 | 155341 | 11 | Chara vulgaris chloroplast |
44 | NC_008116 | TGTA | 3 | 66218 | 66228 | 11 | Staurastrum punctulatum chloroplast |
45 | NC_008117 | TGTA | 3 | 114097 | 114109 | 13 | Zygnema circumcarinatum chloroplast |
46 | NC_008326 | TGTA | 3 | 33921 | 33932 | 12 | Liriodendron tulipifera chloroplast |
47 | NC_008796 | TGTA | 3 | 52013 | 52024 | 12 | Ranunculus macranthus chloroplast |
48 | NC_009265 | TGTA | 3 | 6248 | 6259 | 12 | Aethionema cordifolium chloroplast |
49 | NC_009266 | TGTA | 3 | 6289 | 6300 | 12 | Aethionema grandiflorum chloroplast |
50 | NC_009269 | TGTA | 3 | 6354 | 6365 | 12 | Barbarea verna chloroplast |
51 | NC_009273 | TGTA | 3 | 6182 | 6193 | 12 | Lepidium virginicum chloroplast |
52 | NC_009275 | TGTA | 3 | 6380 | 6391 | 12 | Nasturtium officinale chloroplast |
53 | NC_009573 | TGTA | 3 | 100583 | 100593 | 11 | Rhodomonas salina chloroplast |
54 | NC_009600 | TGTA | 3 | 34550 | 34561 | 12 | Illicium oligandrum chloroplast |
55 | NC_010093 | TGTA | 3 | 31482 | 31493 | 12 | Acorus americanus chloroplast |
56 | NC_010323 | TGTA | 3 | 247 | 258 | 12 | Carica papaya chloroplast |
57 | NC_010601 | TGTA | 3 | 35282 | 35292 | 11 | Guizotia abyssinica chloroplast |
58 | NC_011031 | TGTA | 3 | 27016 | 27027 | 12 | Oedogonium cardiacum chloroplast |
59 | NC_011031 | TGTA | 3 | 63085 | 63096 | 12 | Oedogonium cardiacum chloroplast |
60 | NC_011031 | TGTA | 3 | 112009 | 112020 | 12 | Oedogonium cardiacum chloroplast |
61 | NC_011031 | TGTA | 3 | 162075 | 162086 | 12 | Oedogonium cardiacum chloroplast |
62 | NC_011031 | TGTA | 3 | 164859 | 164870 | 12 | Oedogonium cardiacum chloroplast |
63 | NC_011031 | TGTA | 3 | 165099 | 165110 | 12 | Oedogonium cardiacum chloroplast |
64 | NC_011031 | TGTA | 3 | 165537 | 165547 | 11 | Oedogonium cardiacum chloroplast |
65 | NC_011031 | TGTA | 3 | 171092 | 171103 | 12 | Oedogonium cardiacum chloroplast |
66 | NC_011031 | TGTA | 3 | 187198 | 187209 | 12 | Oedogonium cardiacum chloroplast |
67 | NC_011395 | TGTA | 3 | 27122 | 27133 | 12 | Babesia bovis T2Bo apicoplast |
68 | NC_012615 | TGTA | 3 | 55296 | 55307 | 12 | Megaleranthis saniculifolia chloroplast |
69 | NC_012615 | TGTA | 3 | 68922 | 68932 | 11 | Megaleranthis saniculifolia chloroplast |
70 | NC_013498 | TGTA | 3 | 43008 | 43019 | 12 | Ectocarpus siliculosus chloroplast |
71 | NC_013498 | TGTA | 3 | 122471 | 122483 | 13 | Ectocarpus siliculosus chloroplast |
72 | NC_013498 | TGTA | 3 | 129100 | 129111 | 12 | Ectocarpus siliculosus chloroplast |
73 | NC_013553 | TGTA | 3 | 35983 | 35993 | 11 | Parthenium argentatum chloroplast |