Chloroplast Motifs - Imperfect GCAA Repeats
| S.No | Sequence ID | Motif | Iterations | Start | End | Tract Length | Sequence Name |
| 1 | NC_008788 | GCAA | 4 | 61846 | 61861 | 16 | Nuphar advena chloroplast |
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| 2 | NC_011087 | GCAA | 3 | 49985 | 49996 | 12 | Paulinella chromatophora chromatophore |
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| 3 | NC_011087 | GCAA | 3 | 141708 | 141719 | 12 | Paulinella chromatophora chromatophore |
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| 4 | NC_011087 | GCAA | 3 | 537204 | 537215 | 12 | Paulinella chromatophora chromatophore |
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| 5 | NC_014699 | GCAA | 3 | 56420 | 56430 | 11 | Equisetum arvense chloroplast |
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| 6 | NC_014808 | GCAA | 3 | 40776 | 40786 | 11 | Thalassiosira oceanica CCMP1005 chloroplast |
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| 7 | NC_014808 | GCAA | 3 | 64308 | 64318 | 11 | Thalassiosira oceanica CCMP1005 chloroplast |
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| 8 | NC_015084 | GCAA | 3 | 94557 | 94568 | 12 | Coccomyxa sp. C-169 plastid |
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| 9 | NC_015403 | GCAA | 3 | 121570 | 121580 | 11 | Fistulifera sp. JPCC DA0580 chloroplast |
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| 10 | NC_016471 | GCAA | 3 | 40614 | 40624 | 11 | Neottia nidus-avis plastid |
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| 11 | NC_017609 | GCAA | 3 | 89047 | 89057 | 11 | Phalaenopsis equestris chloroplast |
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| 12 | NC_018114 | GCAA | 3 | 86776 | 86786 | 11 | Erycina pusilla chloroplast |
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| 13 | NC_020795 | GCAA | 3 | 39997 | 40007 | 11 | Chondrus crispus plastid complete genome |
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| 14 | NC_020795 | GCAA | 3 | 85230 | 85240 | 11 | Chondrus crispus plastid complete genome |
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| 15 | NC_021189 | GCAA | 3 | 109603 | 109613 | 11 | Pyropia haitanensis voucher PH-38 chloroplast |
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| 16 | NC_021372 | GCAA | 3 | 58453 | 58464 | 12 | Pharus latifolius chloroplast |
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| 17 | NC_021429 | GCAA | 3 | 88669 | 88679 | 11 | Cymbidium aloifolium voucher KUN:YJB100604 chloroplast |
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| 18 | NC_021430 | GCAA | 3 | 87948 | 87958 | 11 | Cymbidium sinense voucher KUN:YJB100605 chloroplast |
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| 19 | NC_021431 | GCAA | 3 | 88004 | 88014 | 11 | Cymbidium tortisepalum voucher KUN:HJL091027 chloroplast |
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| 20 | NC_021432 | GCAA | 3 | 87970 | 87980 | 11 | Cymbidium tracyanum voucher KUN:YJB100606 chloroplast |
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| 21 | NC_021433 | GCAA | 3 | 88250 | 88260 | 11 | Cymbidium mannii voucher KUN:YJB100602 chloroplast |
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| 22 | NC_000927 | GCAA | 3 | 97282 | 97293 | 12 | Nephroselmis olivacea chloroplast |
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| 23 | NC_001666 | GCAA | 3 | 108288 | 108298 | 11 | Zea mays chloroplast |
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| 24 | NC_003386 | GCAA | 3 | 100866 | 100876 | 11 | Psilotum nudum chloroplast |
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| 25 | NC_005353 | GCAA | 3 | 110205 | 110215 | 11 | Chlamydomonas reinhardtii chloroplast |
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| 26 | NC_005878 | GCAA | 3 | 29491 | 29501 | 11 | Saccharum hybrid cultivar SP-80-3280 chloroplast |
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| 27 | NC_006084 | GCAA | 3 | 109048 | 109058 | 11 | Saccharum hybrid cultivar NCo 310 chloroplast |
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| 28 | NC_007499 | GCAA | 3 | 89056 | 89066 | 11 | Phalaenopsis aphrodite subsp. formosana chloroplast |
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| 29 | NC_007932 | GCAA | 3 | 109710 | 109720 | 11 | Porphyra yezoensis chloroplast |
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| 30 | NC_008099 | GCAA | 3 | 4623 | 4633 | 11 | Oltmannsiellopsis viridis chloroplast |
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| 31 | NC_008602 | GCAA | 3 | 109155 | 109165 | 11 | Sorghum bicolor chloroplast |
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| 32 | NC_008822 | GCAA | 3 | 39514 | 39525 | 12 | Chlorokybus atmophyticus chloroplast |
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| 33 | NC_009681 | GCAA | 3 | 86849 | 86860 | 12 | Leptosira terrestris chloroplast |
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| 34 | NC_009681 | GCAA | 3 | 94688 | 94699 | 12 | Leptosira terrestris chloroplast |
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| 35 | NC_009681 | GCAA | 3 | 174698 | 174709 | 12 | Leptosira terrestris chloroplast |
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| 36 | NC_011713 | GCAA | 3 | 105456 | 105466 | 11 | Festuca arundinacea chloroplast |
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| 37 | NC_012052 | GCAA | 3 | 93817 | 93828 | 12 | Syntrichia ruralis chloroplast |
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| 38 | NC_013273 | GCAA | 3 | 108709 | 108719 | 11 | Coix lacryma-jobi chloroplast |
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| 39 | NC_014056 | GCAA | 3 | 85360 | 85370 | 11 | Oncidium Gower Ramsey chloroplast |
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