Chloroplast Motifs - Imperfect ATAG Repeats
S.No | Sequence ID | Motif | Iterations | Start | End | Tract Length | Sequence Name |
---|---|---|---|---|---|---|---|
1 | NC_016063 | ATAG | 5 | 7816 | 7836 | 21 | Cephalotaxus wilsoniana chloroplast DNA |
2 | NC_012818 | ATAG | 5 | 33611 | 33630 | 20 | Alsophila spinulosa chloroplast |
3 | NC_015899 | ATAG | 4 | 74378 | 74394 | 17 | Wolffia australiana chloroplast |
4 | NC_016069 | ATAG | 4 | 115597 | 115611 | 15 | Picea morrisonicola chloroplast |
5 | NC_016708 | ATAG | 4 | 95247 | 95262 | 16 | Millettia pinnata chloroplast |
6 | NC_020319 | ATAG | 4 | 220 | 235 | 16 | Cycas revoluta chloroplast |
7 | NC_020319 | ATAG | 4 | 138864 | 138879 | 16 | Cycas revoluta chloroplast |
8 | NC_020319 | ATAG | 4 | 162365 | 162380 | 16 | Cycas revoluta chloroplast |
9 | NC_000927 | ATAG | 4 | 95138 | 95152 | 15 | Nephroselmis olivacea chloroplast |
10 | NC_000932 | ATAG | 4 | 112460 | 112475 | 16 | Arabidopsis thaliana chloroplast |
11 | NC_004766 | ATAG | 4 | 8013 | 8029 | 17 | Adiantum capillus-veneris chloroplast |
12 | NC_009598 | ATAG | 4 | 5927 | 5942 | 16 | Chloranthus spicatus chloroplast |
13 | NC_009618 | ATAG | 4 | 38031 | 38046 | 16 | Cycas taitungensis chloroplast |
14 | NC_009618 | ATAG | 4 | 114865 | 114880 | 16 | Cycas taitungensis chloroplast |
15 | NC_009618 | ATAG | 4 | 129806 | 129821 | 16 | Cycas taitungensis chloroplast |
16 | NC_009618 | ATAG | 4 | 138370 | 138385 | 16 | Cycas taitungensis chloroplast |
17 | NC_009808 | ATAG | 4 | 121619 | 121634 | 16 | Ipomoea purpurea chloroplast |
18 | NC_011930 | ATAG | 4 | 76976 | 76991 | 16 | Keteleeria davidiana chloroplast |
19 | NC_011954 | ATAG | 4 | 88960 | 88975 | 16 | Ephedra equisetina chloroplast |
20 | NC_011087 | ATAG | 3 | 138245 | 138255 | 11 | Paulinella chromatophora chromatophore |
21 | NC_014570 | ATAG | 3 | 6609 | 6620 | 12 | Eucalyptus grandis chloroplast |
22 | NC_014570 | ATAG | 3 | 117501 | 117512 | 12 | Eucalyptus grandis chloroplast |
23 | NC_014575 | ATAG | 3 | 21619 | 21630 | 12 | Cedrus deodara chloroplast |
24 | NC_014582 | ATAG | 3 | 25316 | 25327 | 12 | Monsonia speciosa plastid |
25 | NC_014582 | ATAG | 3 | 38580 | 38590 | 11 | Monsonia speciosa plastid |
26 | NC_014589 | ATAG | 3 | 70647 | 70657 | 11 | Cathaya argyrophylla chloroplast |
27 | NC_014874 | ATAG | 3 | 5964 | 5975 | 12 | Rhizanthella gardneri plastid |
28 | NC_015139 | ATAG | 3 | 111520 | 111531 | 12 | Brassica rapa subsp. pekinensis chloroplast |
29 | NC_015204 | ATAG | 3 | 8400 | 8411 | 12 | Gossypium thurberi chloroplast |
30 | NC_015892 | ATAG | 3 | 4679 | 4690 | 12 | Magnolia kwangsiensis chloroplast |
31 | NC_016058 | ATAG | 3 | 41883 | 41894 | 12 | Larix decidua chloroplast |
32 | NC_016063 | ATAG | 3 | 49597 | 49608 | 12 | Cephalotaxus wilsoniana chloroplast DNA |
33 | NC_016064 | ATAG | 3 | 73970 | 73981 | 12 | Pseudotsuga sinensis var. wilsoniana chloroplast |
34 | NC_016065 | ATAG | 3 | 113065 | 113075 | 11 | Taiwania cryptomerioides chloroplast DNA |
35 | NC_016069 | ATAG | 3 | 121804 | 121814 | 11 | Picea morrisonicola chloroplast |
36 | NC_016433 | ATAG | 3 | 118140 | 118151 | 12 | Sesamum indicum chloroplast |
37 | NC_016668 | ATAG | 3 | 8344 | 8355 | 12 | Gossypium raimondii chloroplast |
38 | NC_016670 | ATAG | 3 | 8403 | 8414 | 12 | Gossypium darwinii chloroplast |
39 | NC_016670 | ATAG | 3 | 48618 | 48629 | 12 | Gossypium darwinii chloroplast |
40 | NC_016690 | ATAG | 3 | 8400 | 8411 | 12 | Gossypium tomentosum chloroplast |
41 | NC_016690 | ATAG | 3 | 48641 | 48652 | 12 | Gossypium tomentosum chloroplast |
42 | NC_016692 | ATAG | 3 | 8387 | 8398 | 12 | Gossypium herbaceum subsp. africanum chloroplast |
43 | NC_016711 | ATAG | 3 | 8393 | 8404 | 12 | Gossypium mustelinum chloroplast |
44 | NC_016712 | ATAG | 3 | 8388 | 8399 | 12 | Gossypium arboreum chloroplast |
45 | NC_016734 | ATAG | 3 | 111092 | 111103 | 12 | Brassica napus chloroplast |
46 | NC_016736 | ATAG | 3 | 29467 | 29477 | 11 | Ricinus communis chloroplast |
47 | NC_016986 | ATAG | 3 | 91671 | 91682 | 12 | Ginkgo biloba chloroplast |
48 | NC_017894 | ATAG | 3 | 8363 | 8374 | 12 | Gossypium gossypioides chloroplast |
49 | NC_018109 | ATAG | 3 | 8315 | 8326 | 12 | Gossypium incanum chloroplast |
50 | NC_018110 | ATAG | 3 | 8360 | 8371 | 12 | Gossypium somalense chloroplast |
51 | NC_018111 | ATAG | 3 | 8400 | 8411 | 12 | Gossypium capitis-viridis chloroplast |
52 | NC_018112 | ATAG | 3 | 8360 | 8371 | 12 | Gossypium areysianum chloroplast |
53 | NC_018113 | ATAG | 3 | 8518 | 8529 | 12 | Gossypium robinsonii chloroplast |
54 | NC_018114 | ATAG | 3 | 94954 | 94964 | 11 | Erycina pusilla chloroplast |
55 | NC_018565 | ATAG | 3 | 112452 | 112463 | 12 | Pachycladon enysii chloroplast |
56 | NC_019648 | ATAG | 3 | 1213 | 1223 | 11 | Festuca altissima plastid |
57 | NC_019649 | ATAG | 3 | 1212 | 1222 | 11 | Festuca ovina plastid |
58 | NC_019650 | ATAG | 3 | 1212 | 1222 | 11 | Festuca pratensis plastid |
59 | NC_019651 | ATAG | 3 | 1212 | 1222 | 11 | Lolium multiflorum plastid |
60 | NC_020018 | ATAG | 3 | 2598 | 2608 | 11 | Monomorphina aenigmatica strain UTEX1284 chloroplast |
61 | NC_020019 | ATAG | 3 | 149062 | 149073 | 12 | Camellia sinensis chloroplast |
62 | NC_020319 | ATAG | 3 | 59680 | 59691 | 12 | Cycas revoluta chloroplast |
63 | NC_020319 | ATAG | 3 | 108677 | 108688 | 12 | Cycas revoluta chloroplast |
64 | NC_020319 | ATAG | 3 | 112183 | 112194 | 12 | Cycas revoluta chloroplast |
65 | NC_020319 | ATAG | 3 | 114680 | 114691 | 12 | Cycas revoluta chloroplast |
66 | NC_020361 | ATAG | 3 | 7888 | 7899 | 12 | Podocarpus totara chloroplast |
67 | NC_020361 | ATAG | 3 | 42823 | 42834 | 12 | Podocarpus totara chloroplast |
68 | NC_020361 | ATAG | 3 | 124951 | 124962 | 12 | Podocarpus totara chloroplast |
69 | NC_020367 | ATAG | 3 | 120149 | 120160 | 12 | Dasypogon bromeliifolius plastid |
70 | NC_021102 | ATAG | 3 | 112071 | 112082 | 12 | Pachycladon cheesemanii chloroplast |
71 | NC_021109 | ATAG | 3 | 233660 | 233670 | 11 | Pleodorina starrii plastid |
72 | NC_021110 | ATAG | 3 | 49106 | 49117 | 12 | Cephalotaxus oliveri chloroplast |
73 | NC_021121 | ATAG | 3 | 71150 | 71161 | 12 | Ardisia polysticta chloroplast |
74 | NC_021425 | ATAG | 3 | 130236 | 130246 | 11 | Tetracentron sinense chloroplast |
75 | NC_021426 | ATAG | 3 | 131576 | 131586 | 11 | Trochodendron aralioides chloroplast |
76 | NC_021441 | ATAG | 3 | 111955 | 111965 | 11 | Taiwania flousiana chloroplast |
77 | NC_021618 | ATAG | 3 | 88187 | 88198 | 12 | Grateloupia taiwanensis plastid |
78 | NC_021645 | ATAG | 3 | 84324 | 84335 | 12 | Glycine cyrtoloba voucher CSIRO:G1267 chloroplast |
79 | NC_022136 | ATAG | 3 | 58876 | 58887 | 12 | Lygodium japonicum chloroplast |
80 | NC_022136 | ATAG | 3 | 129432 | 129447 | 16 | Lygodium japonicum chloroplast |
81 | NC_022136 | ATAG | 3 | 143524 | 143535 | 12 | Lygodium japonicum chloroplast |
82 | NC_002693 | ATAG | 3 | 117964 | 117975 | 12 | Oenothera elata subsp. hookeri plastid plastome I |
83 | NC_004543 | ATAG | 3 | 31239 | 31250 | 12 | Anthoceros formosae chloroplast |
84 | NC_007944 | ATAG | 3 | 8387 | 8398 | 12 | Gossypium hirsutum chloroplast |
85 | NC_007977 | ATAG | 3 | 46878 | 46888 | 11 | Helianthus annuus chloroplast |
86 | NC_008097 | ATAG | 3 | 68357 | 68369 | 13 | Chara vulgaris chloroplast |
87 | NC_008097 | ATAG | 3 | 93404 | 93415 | 12 | Chara vulgaris chloroplast |
88 | NC_008115 | ATAG | 3 | 6663 | 6674 | 12 | Eucalyptus globulus subsp. globulus chloroplast |
89 | NC_008115 | ATAG | 3 | 117640 | 117651 | 12 | Eucalyptus globulus subsp. globulus chloroplast |
90 | NC_008235 | ATAG | 3 | 13279 | 13290 | 12 | Populus alba chloroplast |
91 | NC_008359 | ATAG | 3 | 115125 | 115136 | 12 | Morus indica chloroplast |
92 | NC_008407 | ATAG | 3 | 157912 | 157923 | 12 | Jasminum nudiflorum chloroplast |
93 | NC_008454 | ATAG | 3 | 125610 | 125620 | 11 | Pelargonium x hortorum chloroplast |
94 | NC_008457 | ATAG | 3 | 68015 | 68025 | 11 | Piper cenocladum chloroplast |
95 | NC_008591 | ATAG | 3 | 1745 | 1755 | 11 | Agrostis stolonifera chloroplast |
96 | NC_008641 | ATAG | 3 | 8407 | 8418 | 12 | Gossypium barbadense chloroplast |
97 | NC_008641 | ATAG | 3 | 48594 | 48605 | 12 | Gossypium barbadense chloroplast |
98 | NC_009265 | ATAG | 3 | 111932 | 111943 | 12 | Aethionema cordifolium chloroplast |
99 | NC_009266 | ATAG | 3 | 111993 | 112004 | 12 | Aethionema grandiflorum chloroplast |
100 | NC_009267 | ATAG | 3 | 112397 | 112408 | 12 | Olimarabidopsis pumila chloroplast |
101 | NC_009268 | ATAG | 3 | 57850 | 57860 | 11 | Arabis hirsuta chloroplast |
102 | NC_009268 | ATAG | 3 | 111262 | 111273 | 12 | Arabis hirsuta chloroplast |
103 | NC_009269 | ATAG | 3 | 111963 | 111974 | 12 | Barbarea verna chloroplast |
104 | NC_009270 | ATAG | 3 | 112220 | 112231 | 12 | Capsella bursa-pastoris chloroplast |
105 | NC_009271 | ATAG | 3 | 112642 | 112653 | 12 | Crucihimalaya wallichii chloroplast |
106 | NC_009272 | ATAG | 3 | 110844 | 110855 | 12 | Draba nemorosa chloroplast |
107 | NC_009273 | ATAG | 3 | 112421 | 112432 | 12 | Lepidium virginicum chloroplast |
108 | NC_009274 | ATAG | 3 | 110721 | 110732 | 12 | Lobularia maritima chloroplast |
109 | NC_009274 | ATAG | 3 | 122619 | 122629 | 11 | Lobularia maritima chloroplast |
110 | NC_009275 | ATAG | 3 | 50905 | 50916 | 12 | Nasturtium officinale chloroplast |
111 | NC_009275 | ATAG | 3 | 112800 | 112811 | 12 | Nasturtium officinale chloroplast |
112 | NC_009600 | ATAG | 3 | 7456 | 7467 | 12 | Illicium oligandrum chloroplast |
113 | NC_009618 | ATAG | 3 | 90673 | 90684 | 12 | Cycas taitungensis chloroplast |
114 | NC_009681 | ATAG | 3 | 100677 | 100689 | 13 | Leptosira terrestris chloroplast |
115 | NC_009950 | ATAG | 3 | 1212 | 1222 | 11 | Lolium perenne chloroplast |
116 | NC_009963 | ATAG | 3 | 86707 | 86717 | 11 | Cuscuta exaltata chloroplast |
117 | NC_010358 | ATAG | 3 | 117221 | 117232 | 12 | Oenothera argillicola chloroplast |
118 | NC_010359 | ATAG | 3 | 26182 | 26192 | 11 | Aneura mirabilis chloroplast |
119 | NC_010360 | ATAG | 3 | 117906 | 117917 | 12 | Oenothera glazioviana chloroplast |
120 | NC_010361 | ATAG | 3 | 117374 | 117385 | 12 | Oenothera biennis chloroplast |
121 | NC_010362 | ATAG | 3 | 116040 | 116051 | 12 | Oenothera parviflora chloroplast |
122 | NC_010442 | ATAG | 3 | 49981 | 49992 | 12 | Trachelium caeruleum chloroplast |
123 | NC_010654 | ATAG | 3 | 98163 | 98178 | 16 | Welwitschia mirabilis chloroplast |
124 | NC_011031 | ATAG | 3 | 7930 | 7942 | 13 | Oedogonium cardiacum chloroplast |
125 | NC_011032 | ATAG | 3 | 1220 | 1230 | 11 | Brachypodium distachyon chloroplast |
126 | NC_011713 | ATAG | 3 | 1214 | 1224 | 11 | Festuca arundinacea chloroplast |
127 | NC_011954 | ATAG | 3 | 92930 | 92940 | 11 | Ephedra equisetina chloroplast |
128 | NC_014057 | ATAG | 3 | 119327 | 119337 | 11 | Pisum sativum chloroplast |