ChloroMitoSSRDB 2.0 Webserver cum Database of Cholorplast and Mitochondrial Microsatellites

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Chloroplast Motifs - Imperfect ATAG Repeats

S.NoSequence IDMotifIterationsStartEndTract LengthSequence Name
1NC_016063ATAG57816783621Cephalotaxus wilsoniana chloroplast DNA
2NC_012818ATAG5336113363020 Alsophila spinulosa chloroplast
3NC_015899ATAG4743787439417Wolffia australiana chloroplast
4NC_016069ATAG411559711561115Picea morrisonicola chloroplast
5NC_016708ATAG4952479526216Millettia pinnata chloroplast
6NC_020319ATAG422023516Cycas revoluta chloroplast
7NC_020319ATAG413886413887916Cycas revoluta chloroplast
8NC_020319ATAG416236516238016Cycas revoluta chloroplast
9NC_000927ATAG4951389515215 Nephroselmis olivacea chloroplast
10NC_000932ATAG411246011247516 Arabidopsis thaliana chloroplast
11NC_004766ATAG48013802917 Adiantum capillus-veneris chloroplast
12NC_009598ATAG45927594216 Chloranthus spicatus chloroplast
13NC_009618ATAG4380313804616 Cycas taitungensis chloroplast
14NC_009618ATAG411486511488016 Cycas taitungensis chloroplast
15NC_009618ATAG412980612982116 Cycas taitungensis chloroplast
16NC_009618ATAG413837013838516 Cycas taitungensis chloroplast
17NC_009808ATAG412161912163416 Ipomoea purpurea chloroplast
18NC_011930ATAG4769767699116 Keteleeria davidiana chloroplast
19NC_011954ATAG4889608897516 Ephedra equisetina chloroplast
20NC_011087ATAG313824513825511Paulinella chromatophora chromatophore
21NC_014570ATAG36609662012Eucalyptus grandis chloroplast
22NC_014570ATAG311750111751212Eucalyptus grandis chloroplast
23NC_014575ATAG3216192163012Cedrus deodara chloroplast
24NC_014582ATAG3253162532712Monsonia speciosa plastid
25NC_014582ATAG3385803859011Monsonia speciosa plastid
26NC_014589ATAG3706477065711Cathaya argyrophylla chloroplast
27NC_014874ATAG35964597512Rhizanthella gardneri plastid
28NC_015139ATAG311152011153112Brassica rapa subsp. pekinensis chloroplast
29NC_015204ATAG38400841112Gossypium thurberi chloroplast
30NC_015892ATAG34679469012Magnolia kwangsiensis chloroplast
31NC_016058ATAG3418834189412Larix decidua chloroplast
32NC_016063ATAG3495974960812Cephalotaxus wilsoniana chloroplast DNA
33NC_016064ATAG3739707398112Pseudotsuga sinensis var. wilsoniana chloroplast
34NC_016065ATAG311306511307511Taiwania cryptomerioides chloroplast DNA
35NC_016069ATAG312180412181411Picea morrisonicola chloroplast
36NC_016433ATAG311814011815112Sesamum indicum chloroplast
37NC_016668ATAG38344835512Gossypium raimondii chloroplast
38NC_016670ATAG38403841412Gossypium darwinii chloroplast
39NC_016670ATAG3486184862912Gossypium darwinii chloroplast
40NC_016690ATAG38400841112Gossypium tomentosum chloroplast
41NC_016690ATAG3486414865212Gossypium tomentosum chloroplast
42NC_016692ATAG38387839812Gossypium herbaceum subsp. africanum chloroplast
43NC_016711ATAG38393840412Gossypium mustelinum chloroplast
44NC_016712ATAG38388839912Gossypium arboreum chloroplast
45NC_016734ATAG311109211110312Brassica napus chloroplast
46NC_016736ATAG3294672947711Ricinus communis chloroplast
47NC_016986ATAG3916719168212Ginkgo biloba chloroplast
48NC_017894ATAG38363837412Gossypium gossypioides chloroplast
49NC_018109ATAG38315832612Gossypium incanum chloroplast
50NC_018110ATAG38360837112Gossypium somalense chloroplast
51NC_018111ATAG38400841112Gossypium capitis-viridis chloroplast
52NC_018112ATAG38360837112Gossypium areysianum chloroplast
53NC_018113ATAG38518852912Gossypium robinsonii chloroplast
54NC_018114ATAG3949549496411Erycina pusilla chloroplast
55NC_018565ATAG311245211246312Pachycladon enysii chloroplast
56NC_019648ATAG31213122311Festuca altissima plastid
57NC_019649ATAG31212122211Festuca ovina plastid
58NC_019650ATAG31212122211Festuca pratensis plastid
59NC_019651ATAG31212122211Lolium multiflorum plastid
60NC_020018ATAG32598260811Monomorphina aenigmatica strain UTEX1284 chloroplast
61NC_020019ATAG314906214907312Camellia sinensis chloroplast
62NC_020319ATAG3596805969112Cycas revoluta chloroplast
63NC_020319ATAG310867710868812Cycas revoluta chloroplast
64NC_020319ATAG311218311219412Cycas revoluta chloroplast
65NC_020319ATAG311468011469112Cycas revoluta chloroplast
66NC_020361ATAG37888789912Podocarpus totara chloroplast
67NC_020361ATAG3428234283412Podocarpus totara chloroplast
68NC_020361ATAG312495112496212Podocarpus totara chloroplast
69NC_020367ATAG312014912016012Dasypogon bromeliifolius plastid
70NC_021102ATAG311207111208212Pachycladon cheesemanii chloroplast
71NC_021109ATAG323366023367011Pleodorina starrii plastid
72NC_021110ATAG3491064911712Cephalotaxus oliveri chloroplast
73NC_021121ATAG3711507116112Ardisia polysticta chloroplast
74NC_021425ATAG313023613024611Tetracentron sinense chloroplast
75NC_021426ATAG313157613158611Trochodendron aralioides chloroplast
76NC_021441ATAG311195511196511Taiwania flousiana chloroplast
77NC_021618ATAG3881878819812Grateloupia taiwanensis plastid
78NC_021645ATAG3843248433512Glycine cyrtoloba voucher CSIRO:G1267 chloroplast
79NC_022136ATAG3588765888712Lygodium japonicum chloroplast
80NC_022136ATAG312943212944716Lygodium japonicum chloroplast
81NC_022136ATAG314352414353512Lygodium japonicum chloroplast
82NC_002693ATAG311796411797512 Oenothera elata subsp. hookeri plastid plastome I
83NC_004543ATAG3312393125012 Anthoceros formosae chloroplast
84NC_007944ATAG38387839812 Gossypium hirsutum chloroplast
85NC_007977ATAG3468784688811 Helianthus annuus chloroplast
86NC_008097ATAG3683576836913 Chara vulgaris chloroplast
87NC_008097ATAG3934049341512 Chara vulgaris chloroplast
88NC_008115ATAG36663667412 Eucalyptus globulus subsp. globulus chloroplast
89NC_008115ATAG311764011765112 Eucalyptus globulus subsp. globulus chloroplast
90NC_008235ATAG3132791329012 Populus alba chloroplast
91NC_008359ATAG311512511513612 Morus indica chloroplast
92NC_008407ATAG315791215792312 Jasminum nudiflorum chloroplast
93NC_008454ATAG312561012562011 Pelargonium x hortorum chloroplast
94NC_008457ATAG3680156802511 Piper cenocladum chloroplast
95NC_008591ATAG31745175511 Agrostis stolonifera chloroplast
96NC_008641ATAG38407841812 Gossypium barbadense chloroplast
97NC_008641ATAG3485944860512 Gossypium barbadense chloroplast
98NC_009265ATAG311193211194312 Aethionema cordifolium chloroplast
99NC_009266ATAG311199311200412 Aethionema grandiflorum chloroplast
100NC_009267ATAG311239711240812 Olimarabidopsis pumila chloroplast
101NC_009268ATAG3578505786011 Arabis hirsuta chloroplast
102NC_009268ATAG311126211127312 Arabis hirsuta chloroplast
103NC_009269ATAG311196311197412 Barbarea verna chloroplast
104NC_009270ATAG311222011223112 Capsella bursa-pastoris chloroplast
105NC_009271ATAG311264211265312 Crucihimalaya wallichii chloroplast
106NC_009272ATAG311084411085512 Draba nemorosa chloroplast
107NC_009273ATAG311242111243212 Lepidium virginicum chloroplast
108NC_009274ATAG311072111073212 Lobularia maritima chloroplast
109NC_009274ATAG312261912262911 Lobularia maritima chloroplast
110NC_009275ATAG3509055091612 Nasturtium officinale chloroplast
111NC_009275ATAG311280011281112 Nasturtium officinale chloroplast
112NC_009600ATAG37456746712 Illicium oligandrum chloroplast
113NC_009618ATAG3906739068412 Cycas taitungensis chloroplast
114NC_009681ATAG310067710068913 Leptosira terrestris chloroplast
115NC_009950ATAG31212122211 Lolium perenne chloroplast
116NC_009963ATAG3867078671711 Cuscuta exaltata chloroplast
117NC_010358ATAG311722111723212 Oenothera argillicola chloroplast
118NC_010359ATAG3261822619211 Aneura mirabilis chloroplast
119NC_010360ATAG311790611791712 Oenothera glazioviana chloroplast
120NC_010361ATAG311737411738512 Oenothera biennis chloroplast
121NC_010362ATAG311604011605112 Oenothera parviflora chloroplast
122NC_010442ATAG3499814999212 Trachelium caeruleum chloroplast
123NC_010654ATAG3981639817816 Welwitschia mirabilis chloroplast
124NC_011031ATAG37930794213 Oedogonium cardiacum chloroplast
125NC_011032ATAG31220123011 Brachypodium distachyon chloroplast
126NC_011713ATAG31214122411 Festuca arundinacea chloroplast
127NC_011954ATAG3929309294011 Ephedra equisetina chloroplast
128NC_014057ATAG311932711933711 Pisum sativum chloroplast