Chloroplast Motifs - Imperfect TCC Repeats
S.No | Sequence ID | Motif | Iterations | Start | End | Tract Length | Sequence Name |
---|---|---|---|---|---|---|---|
1 | NC_013086 | TCC | 18 | 44714 | 44767 | 54 | Selaginella moellendorffii plastid |
2 | NC_013086 | TCC | 18 | 92961 | 93011 | 51 | Selaginella moellendorffii plastid |
3 | NC_013086 | TCC | 11 | 122945 | 122977 | 33 | Selaginella moellendorffii plastid |
4 | NC_013086 | TCC | 8 | 112318 | 112341 | 24 | Selaginella moellendorffii plastid |
5 | NC_008788 | TCC | 7 | 133594 | 133614 | 21 | Nuphar advena chloroplast |
6 | NC_014807 | TCC | 5 | 132140 | 132154 | 15 | Corynocarpus laevigata chloroplast |
7 | NC_022136 | TCC | 5 | 153613 | 153630 | 18 | Lygodium japonicum chloroplast |
8 | NC_014340 | TCC | 4 | 39992 | 40003 | 12 | Chromera velia strain CCMP2878 chloroplast |
9 | NC_014345 | TCC | 4 | 23617 | 23629 | 13 | Alveolata sp. CCMP3155 chloroplast |
10 | NC_014589 | TCC | 4 | 726 | 736 | 11 | Cathaya argyrophylla chloroplast |
11 | NC_015206 | TCC | 4 | 73172 | 73182 | 11 | Fragaria vesca subsp. vesca chloroplast |
12 | NC_015894 | TCC | 4 | 124008 | 124019 | 12 | Wolffiella lingulata chloroplast |
13 | NC_016058 | TCC | 4 | 114092 | 114103 | 12 | Larix decidua chloroplast |
14 | NC_016069 | TCC | 4 | 47761 | 47771 | 11 | Picea morrisonicola chloroplast |
15 | NC_016677 | TCC | 4 | 37999 | 38010 | 12 | Leersia tisserantii plastid |
16 | NC_016718 | TCC | 4 | 37881 | 37892 | 12 | Rhynchoryza subulata plastid |
17 | NC_016927 | TCC | 4 | 36709 | 36720 | 12 | Oryza meridionalis chloroplast |
18 | NC_016986 | TCC | 4 | 139570 | 139582 | 13 | Ginkgo biloba chloroplast |
19 | NC_017602 | TCC | 4 | 79310 | 79321 | 12 | Elaeis guineensis chloroplast |
20 | NC_017835 | TCC | 4 | 36702 | 36713 | 12 | Oryza rufipogon chloroplast |
21 | NC_018766 | TCC | 4 | 73222 | 73232 | 11 | Fragaria vesca subsp. bracteata chloroplast |
22 | NC_018767 | TCC | 4 | 73226 | 73236 | 11 | Fragaria mandshurica plastid |
23 | NC_019601 | TCC | 4 | 73129 | 73139 | 11 | Fragaria chiloensis chloroplast |
24 | NC_019602 | TCC | 4 | 73167 | 73177 | 11 | Fragaria virginiana chloroplast |
25 | NC_020147 | TCC | 4 | 29170 | 29180 | 11 | Ophioglossum californicum chloroplast |
26 | NC_020147 | TCC | 4 | 111981 | 111992 | 12 | Ophioglossum californicum chloroplast |
27 | NC_020316 | TCC | 4 | 87443 | 87454 | 12 | Magnolia officinalis chloroplast |
28 | NC_020319 | TCC | 4 | 45966 | 45977 | 12 | Cycas revoluta chloroplast |
29 | NC_020321 | TCC | 4 | 123344 | 123355 | 12 | Taxus mairei voucher NN014 chloroplast |
30 | NC_020362 | TCC | 4 | 83854 | 83865 | 12 | Heliconia collinsiana plastid |
31 | NC_020364 | TCC | 4 | 80055 | 80066 | 12 | Pseudophoenix vinifera plastid |
32 | NC_020366 | TCC | 4 | 80579 | 80590 | 12 | Bismarckia nobilis plastid |
33 | NC_020367 | TCC | 4 | 80325 | 80336 | 12 | Dasypogon bromeliifolius plastid |
34 | NC_021189 | TCC | 4 | 94069 | 94080 | 12 | Pyropia haitanensis voucher PH-38 chloroplast |
35 | NC_021372 | TCC | 4 | 39028 | 39039 | 12 | Pharus latifolius chloroplast |
36 | NC_021423 | TCC | 4 | 124675 | 124685 | 11 | Catharanthus roseus cultivar Pacifica Punch Halo chloroplast |
37 | NC_021449 | TCC | 4 | 69781 | 69791 | 11 | Utricularia gibba chloroplast |
38 | NC_022099 | TCC | 4 | 68665 | 68676 | 12 | Medicago truncatula cultivar Jemalong 2HA plastid |
39 | NC_022100 | TCC | 4 | 68499 | 68510 | 12 | Medicago truncatula cultivar Borung plastid |
40 | NC_022136 | TCC | 4 | 128157 | 128168 | 12 | Lygodium japonicum chloroplast |
41 | NC_001320 | TCC | 4 | 36706 | 36717 | 12 | Oryza sativa Japonica Group plastid |
42 | NC_001840 | TCC | 4 | 141659 | 141670 | 12 | Cyanidium caldarium chloroplast |
43 | NC_002186 | TCC | 4 | 18676 | 18687 | 12 | Mesostigma viride chloroplast |
44 | NC_002694 | TCC | 4 | 120159 | 120169 | 11 | Lotus japonicus chloroplast |
45 | NC_003119 | TCC | 4 | 68665 | 68676 | 12 | Medicago truncatula chloroplast |
46 | NC_003386 | TCC | 4 | 129121 | 129131 | 11 | Psilotum nudum chloroplast |
47 | NC_004543 | TCC | 4 | 123374 | 123385 | 12 | Anthoceros formosae chloroplast |
48 | NC_004799 | TCC | 4 | 67084 | 67095 | 12 | Cyanidioschyzon merolae strain 10D chloroplast |
49 | NC_005973 | TCC | 4 | 36640 | 36651 | 12 | Oryza nivara chloroplast |
50 | NC_006050 | TCC | 4 | 35248 | 35259 | 12 | Nymphaea alba chloroplast |
51 | NC_006137 | TCC | 4 | 135122 | 135133 | 12 | Gracilaria tenuistipitata var. liui chloroplast |
52 | NC_006861 | TCC | 4 | 19863 | 19873 | 11 | Huperzia lucidula chloroplast |
53 | NC_006861 | TCC | 4 | 28138 | 28149 | 12 | Huperzia lucidula chloroplast |
54 | NC_006861 | TCC | 4 | 117244 | 117254 | 11 | Huperzia lucidula chloroplast |
55 | NC_006861 | TCC | 4 | 148403 | 148413 | 11 | Huperzia lucidula chloroplast |
56 | NC_008097 | TCC | 4 | 112474 | 112484 | 11 | Chara vulgaris chloroplast |
57 | NC_008155 | TCC | 4 | 36666 | 36677 | 12 | Oryza sativa Indica Group chloroplast |
58 | NC_008336 | TCC | 4 | 73275 | 73285 | 11 | Nandina domestica chloroplast |
59 | NC_008454 | TCC | 4 | 63639 | 63650 | 12 | Pelargonium x hortorum chloroplast |
60 | NC_008456 | TCC | 4 | 82520 | 82531 | 12 | Drimys granadensis chloroplast |
61 | NC_008822 | TCC | 4 | 78849 | 78860 | 12 | Chlorokybus atmophyticus chloroplast |
62 | NC_008829 | TCC | 4 | 32169 | 32180 | 12 | Angiopteris evecta chloroplast |
63 | NC_008829 | TCC | 4 | 36910 | 36921 | 12 | Angiopteris evecta chloroplast |
64 | NC_010109 | TCC | 4 | 65013 | 65024 | 12 | Lemna minor chloroplast |
65 | NC_010654 | TCC | 4 | 67463 | 67473 | 11 | Welwitschia mirabilis chloroplast |
66 | NC_011713 | TCC | 4 | 14293 | 14305 | 13 | Festuca arundinacea chloroplast |
67 | NC_011713 | TCC | 4 | 102367 | 102378 | 12 | Festuca arundinacea chloroplast |
68 | NC_012568 | TCC | 4 | 41402 | 41413 | 12 | Micromonas pusilla CCMP1545 chloroplast |
69 | NC_012568 | TCC | 4 | 41666 | 41677 | 12 | Micromonas pusilla CCMP1545 chloroplast |
70 | NC_012818 | TCC | 4 | 31126 | 31138 | 13 | Alsophila spinulosa chloroplast |
71 | NC_013086 | TCC | 4 | 119909 | 119921 | 13 | Selaginella moellendorffii plastid |
72 | NC_013823 | TCC | 4 | 126408 | 126419 | 12 | Typha latifolia chloroplast |
73 | NC_013991 | TCC | 4 | 80351 | 80362 | 12 | Phoenix dactylifera chloroplast |