ChloroMitoSSRDB 2.0 Webserver cum Database of Cholorplast and Mitochondrial Microsatellites

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Chloroplast Motifs - Imperfect CTAG Repeats

S.NoSequence IDMotifIterationsStartEndTract LengthSequence Name
1NC_014345CTAG4624176243115Alveolata sp. CCMP3155 chloroplast
2NC_008822CTAG4882878830216 Chlorokybus atmophyticus chloroplast
3NC_011087CTAG3316673167812Paulinella chromatophora chromatophore
4NC_014675CTAG3468994691113Isoetes flaccida chloroplast
5NC_015803CTAG3427794279113Indocalamus longiauritus plastid
6NC_015817CTAG3427144272613Phyllostachys edulis chloroplast
7NC_015820CTAG3428024281413Acidosasa purpurea chloroplast
8NC_015826CTAG3426954270713Phyllostachys nigra var. henonis chloroplast
9NC_015830CTAG3423744238613Bambusa emeiensis chloroplast
10NC_015831CTAG3424644247613Ferrocalamus rimosivaginus plastid
11NC_015990CTAG3418874189913Panicum virgatum chloroplast
12NC_016677CTAG3414734148513Leersia tisserantii plastid
13NC_016699CTAG3427264273813Phyllostachys propinqua chloroplast
14NC_016718CTAG3413554136713Rhynchoryza subulata plastid
15NC_016927CTAG3401824019413Oryza meridionalis chloroplast
16NC_017835CTAG3401754018713Oryza rufipogon chloroplast
17NC_019649CTAG3388483886013Festuca ovina plastid
18NC_020341CTAG3427164272813Arundinaria gigantea chloroplast
19NC_021372CTAG3425114252313Pharus latifolius chloroplast
20NC_021437CTAG35900591112Cunninghamia lanceolata chloroplast
21NC_021760CTAG3403474035913Triticum monococcum chloroplast
22NC_021761CTAG3404134042513Secale cereale chloroplast
23NC_021762CTAG3403254033713Triticum urartu chloroplast
24NC_022133CTAG3402414025313Aegilops tauschii chloroplast
25NC_022135CTAG3403904040213Aegilops speltoides isolate SPE0661 chloroplast
26NC_001320CTAG3401794019113 Oryza sativa Japonica Group plastid
27NC_001666CTAG3425334254513 Zea mays chloroplast
28NC_002762CTAG3406454065713 Triticum aestivum chloroplast
29NC_005353CTAG3532225323211 Chlamydomonas reinhardtii chloroplast
30NC_005878CTAG310471110472313 Saccharum hybrid cultivar SP-80-3280 chloroplast
31NC_005973CTAG3401134012513 Oryza nivara chloroplast
32NC_006084CTAG3430844309613 Saccharum hybrid cultivar NCo 310 chloroplast
33NC_008155CTAG3401394015113 Oryza sativa Indica Group chloroplast
34NC_008454CTAG315717415718512 Pelargonium x hortorum chloroplast
35NC_008590CTAG3408094082113 Hordeum vulgare subsp. vulgare chloroplast
36NC_008602CTAG3433034331513 Sorghum bicolor chloroplast
37NC_009808CTAG3674306744011 Ipomoea purpurea chloroplast
38NC_009962CTAG313075613076611 Ceratophyllum demersum chloroplast
39NC_011032CTAG3399723998413 Brachypodium distachyon chloroplast
40NC_013088CTAG3424134242513 Dendrocalamus latiflorus chloroplast
41NC_013273CTAG3427934280513 Coix lacryma-jobi chloroplast
42NC_014062CTAG3423084232013 Anomochloa marantoidea chloroplast