Chloroplast Motifs - Imperfect TTATT Repeats
S.No | Sequence ID | Motif | Iterations | Start | End | Tract Length | Sequence Name |
---|---|---|---|---|---|---|---|
1 | NC_016921 | TTATT | 4 | 52708 | 52726 | 19 | Pentactina rupicola chloroplast |
2 | NC_018552 | TTATT | 4 | 33778 | 33796 | 19 | Capsicum annuum chloroplast |
3 | NC_020366 | TTATT | 4 | 16821 | 16839 | 19 | Bismarckia nobilis plastid |
4 | NC_020438 | TTATT | 4 | 68440 | 68458 | 19 | Gonium pectorale chloroplast |
5 | NC_001603 | TTATT | 4 | 45502 | 45520 | 19 | Euglena gracilis chloroplast |
6 | NC_001603 | TTATT | 4 | 54169 | 54187 | 19 | Euglena gracilis chloroplast |
7 | NC_008097 | TTATT | 4 | 134648 | 134667 | 20 | Chara vulgaris chloroplast |
8 | NC_008335 | TTATT | 4 | 78526 | 78546 | 21 | Platanus occidentalis chloroplast |
9 | NC_008456 | TTATT | 4 | 123645 | 123664 | 20 | Drimys granadensis chloroplast |
10 | NC_009598 | TTATT | 4 | 83378 | 83397 | 20 | Chloranthus spicatus chloroplast |
11 | NC_009599 | TTATT | 4 | 122397 | 122416 | 20 | Buxus microphylla chloroplast |
12 | NC_009681 | TTATT | 4 | 142990 | 143009 | 20 | Leptosira terrestris chloroplast |
13 | NC_009808 | TTATT | 4 | 16100 | 16118 | 19 | Ipomoea purpurea chloroplast |
14 | NC_011600 | TTATT | 4 | 100439 | 100459 | 21 | Vaucheria litorea chloroplast |
15 | NC_012224 | TTATT | 4 | 33076 | 33094 | 19 | Jatropha curcas chloroplast |
16 | NC_011087 | TTATT | 3 | 234539 | 234552 | 14 | Paulinella chromatophora chromatophore |
17 | NC_014674 | TTATT | 3 | 40103 | 40118 | 16 | Castanea mollissima chloroplast |
18 | NC_015204 | TTATT | 3 | 51440 | 51453 | 14 | Gossypium thurberi chloroplast |
19 | NC_015308 | TTATT | 3 | 55446 | 55461 | 16 | Hevea brasiliensis chloroplast |
20 | NC_015359 | TTATT | 3 | 61396 | 61411 | 16 | Chlorella variabilis plastid |
21 | NC_015645 | TTATT | 3 | 51873 | 51887 | 15 | Schizomeris leibleinii chloroplast |
22 | NC_015891 | TTATT | 3 | 47054 | 47068 | 15 | Spirodela polyrhiza chloroplast |
23 | NC_015892 | TTATT | 3 | 123290 | 123303 | 14 | Magnolia kwangsiensis chloroplast |
24 | NC_015894 | TTATT | 3 | 46884 | 46898 | 15 | Wolffiella lingulata chloroplast |
25 | NC_015899 | TTATT | 3 | 46063 | 46077 | 15 | Wolffia australiana chloroplast |
26 | NC_015983 | TTATT | 3 | 48335 | 48349 | 15 | Cucumis melo subsp. melo chloroplast |
27 | NC_015996 | TTATT | 3 | 71267 | 71281 | 15 | Pyrus pyrifolia chloroplast |
28 | NC_016065 | TTATT | 3 | 80855 | 80868 | 14 | Taiwania cryptomerioides chloroplast DNA |
29 | NC_016430 | TTATT | 3 | 34508 | 34521 | 14 | Eleutherococcus senticosus chloroplast |
30 | NC_016670 | TTATT | 3 | 51565 | 51578 | 14 | Gossypium darwinii chloroplast |
31 | NC_016690 | TTATT | 3 | 51588 | 51601 | 14 | Gossypium tomentosum chloroplast |
32 | NC_016692 | TTATT | 3 | 51440 | 51453 | 14 | Gossypium herbaceum subsp. africanum chloroplast |
33 | NC_016711 | TTATT | 3 | 51493 | 51506 | 14 | Gossypium mustelinum chloroplast |
34 | NC_016712 | TTATT | 3 | 51400 | 51413 | 14 | Gossypium arboreum chloroplast |
35 | NC_016732 | TTATT | 3 | 162919 | 162933 | 15 | Dunaliella salina chloroplast |
36 | NC_016732 | TTATT | 3 | 202741 | 202754 | 14 | Dunaliella salina chloroplast |
37 | NC_018051 | TTATT | 3 | 121613 | 121627 | 15 | Vigna unguiculata chloroplast |
38 | NC_018109 | TTATT | 3 | 50812 | 50825 | 14 | Gossypium incanum chloroplast |
39 | NC_018110 | TTATT | 3 | 50960 | 50973 | 14 | Gossypium somalense chloroplast |
40 | NC_018111 | TTATT | 3 | 50890 | 50903 | 14 | Gossypium capitis-viridis chloroplast |
41 | NC_018112 | TTATT | 3 | 50984 | 50997 | 14 | Gossypium areysianum chloroplast |
42 | NC_018113 | TTATT | 3 | 51110 | 51123 | 14 | Gossypium robinsonii chloroplast |
43 | NC_018357 | TTATT | 3 | 123518 | 123531 | 14 | Magnolia denudata chloroplast |
44 | NC_020018 | TTATT | 3 | 19764 | 19777 | 14 | Monomorphina aenigmatica strain UTEX1284 chloroplast |
45 | NC_020019 | TTATT | 3 | 101356 | 101369 | 14 | Camellia sinensis chloroplast |
46 | NC_020152 | TTATT | 3 | 40071 | 40086 | 16 | Quercus rubra plastid |
47 | NC_020316 | TTATT | 3 | 123646 | 123659 | 14 | Magnolia officinalis chloroplast |
48 | NC_020317 | TTATT | 3 | 123574 | 123587 | 14 | Magnolia officinalis subsp. biloba voucher SC001 chloroplast |
49 | NC_020318 | TTATT | 3 | 123161 | 123174 | 14 | Magnolia grandiflora voucher NJ016 chloroplast |
50 | NC_020362 | TTATT | 3 | 36778 | 36791 | 14 | Heliconia collinsiana plastid |
51 | NC_020367 | TTATT | 3 | 9182 | 9197 | 16 | Dasypogon bromeliifolius plastid |
52 | NC_021189 | TTATT | 3 | 62618 | 62631 | 14 | Pyropia haitanensis voucher PH-38 chloroplast |
53 | NC_021426 | TTATT | 3 | 125363 | 125376 | 14 | Trochodendron aralioides chloroplast |
54 | NC_021441 | TTATT | 3 | 79895 | 79908 | 14 | Taiwania flousiana chloroplast |
55 | NC_021449 | TTATT | 3 | 7998 | 8013 | 16 | Utricularia gibba chloroplast |
56 | NC_021455 | TTATT | 3 | 14413 | 14426 | 14 | Prinsepia utilis plastid |
57 | NC_001603 | TTATT | 3 | 118901 | 118914 | 14 | Euglena gracilis chloroplast |
58 | NC_001603 | TTATT | 3 | 124819 | 124832 | 14 | Euglena gracilis chloroplast |
59 | NC_001603 | TTATT | 3 | 130737 | 130750 | 14 | Euglena gracilis chloroplast |
60 | NC_001799 | TTATT | 3 | 9259 | 9272 | 14 | Toxoplasma gondii RH apicoplast |
61 | NC_001879 | TTATT | 3 | 33995 | 34008 | 14 | Nicotiana tabacum plastid |
62 | NC_002652 | TTATT | 3 | 63960 | 63973 | 14 | Euglena longa plastid |
63 | NC_004823 | TTATT | 3 | 4439 | 4452 | 14 | Eimeria tenella strain Penn State apicoplast |
64 | NC_007144 | TTATT | 3 | 48311 | 48325 | 15 | Cucumis sativus chloroplast |
65 | NC_007500 | TTATT | 3 | 33992 | 34005 | 14 | Nicotiana sylvestris chloroplast |
66 | NC_007944 | TTATT | 3 | 51477 | 51490 | 14 | Gossypium hirsutum chloroplast |
67 | NC_008326 | TTATT | 3 | 123457 | 123470 | 14 | Liriodendron tulipifera chloroplast |
68 | NC_008457 | TTATT | 3 | 121816 | 121830 | 15 | Piper cenocladum chloroplast |
69 | NC_008535 | TTATT | 3 | 32879 | 32892 | 14 | Coffea arabica chloroplast |
70 | NC_008641 | TTATT | 3 | 51530 | 51543 | 14 | Gossypium barbadense chloroplast |
71 | NC_009269 | TTATT | 3 | 9197 | 9210 | 14 | Barbarea verna chloroplast |
72 | NC_009598 | TTATT | 3 | 101553 | 101566 | 14 | Chloranthus spicatus chloroplast |
73 | NC_009599 | TTATT | 3 | 49509 | 49523 | 15 | Buxus microphylla chloroplast |
74 | NC_009599 | TTATT | 3 | 55795 | 55808 | 14 | Buxus microphylla chloroplast |
75 | NC_009601 | TTATT | 3 | 15457 | 15471 | 15 | Dioscorea elephantipes chloroplast |
76 | NC_009681 | TTATT | 3 | 14748 | 14761 | 14 | Leptosira terrestris chloroplast |
77 | NC_010109 | TTATT | 3 | 45600 | 45614 | 15 | Lemna minor chloroplast |
78 | NC_010433 | TTATT | 3 | 55214 | 55229 | 16 | Manihot esculenta chloroplast |
79 | NC_010433 | TTATT | 3 | 69728 | 69742 | 15 | Manihot esculenta chloroplast |
80 | NC_010772 | TTATT | 3 | 10194 | 10208 | 15 | Heterosigma akashiwo chloroplast |
81 | NC_011031 | TTATT | 3 | 89283 | 89298 | 16 | Oedogonium cardiacum chloroplast |
82 | NC_011163 | TTATT | 3 | 67042 | 67055 | 14 | Cicer arietinum chloroplast |
83 | NC_011163 | TTATT | 3 | 80603 | 80616 | 14 | Cicer arietinum chloroplast |
84 | NC_013359 | TTATT | 3 | 149244 | 149257 | 14 | Bryopsis hypnoides chloroplast |
85 | NC_013498 | TTATT | 3 | 67452 | 67465 | 14 | Ectocarpus siliculosus chloroplast |
86 | NC_013823 | TTATT | 3 | 63306 | 63320 | 15 | Typha latifolia chloroplast |
87 | NC_013843 | TTATT | 3 | 121637 | 121651 | 15 | Vigna radiata chloroplast |
88 | NC_014057 | TTATT | 3 | 119420 | 119434 | 15 | Pisum sativum chloroplast |