ChloroMitoSSRDB 2.0 Webserver cum Database of Cholorplast and Mitochondrial Microsatellites

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Chloroplast Motifs - Imperfect ATTCT Repeats

S.NoSequence IDMotifIterationsStartEndTract LengthSequence Name
1NC_008117ATTCT16601046018380 Zygnema circumcarinatum chloroplast
2NC_015891ATTCT4862028622221Spirodela polyrhiza chloroplast
3NC_015899ATTCT4863698638921Wolffia australiana chloroplast
4NC_010109ATTCT4845978461721 Lemna minor chloroplast
5NC_011087ATTCT397054497055714Paulinella chromatophora chromatophore
6NC_015083ATTCT3473004731415Erodium carvifolium chloroplast
7NC_015204ATTCT3100001001314Gossypium thurberi chloroplast
8NC_015204ATTCT3542035421614Gossypium thurberi chloroplast
9NC_015803ATTCT313925713927014Indocalamus longiauritus plastid
10NC_015817ATTCT313926813928114Phyllostachys edulis chloroplast
11NC_015820ATTCT313928813930114Acidosasa purpurea chloroplast
12NC_015826ATTCT313942813944114Phyllostachys nigra var. henonis chloroplast
13NC_015830ATTCT313907713909014Bambusa emeiensis chloroplast
14NC_015831ATTCT313905813907114Ferrocalamus rimosivaginus plastid
15NC_015990ATTCT313921613922914Panicum virgatum chloroplast
16NC_016668ATTCT39937995014Gossypium raimondii chloroplast
17NC_016668ATTCT3540485406114Gossypium raimondii chloroplast
18NC_016670ATTCT3100141002714Gossypium darwinii chloroplast
19NC_016670ATTCT3543305434314Gossypium darwinii chloroplast
20NC_016677ATTCT313614113615414Leersia tisserantii plastid
21NC_016690ATTCT3100111002414Gossypium tomentosum chloroplast
22NC_016690ATTCT3543525436514Gossypium tomentosum chloroplast
23NC_016692ATTCT39986999914Gossypium herbaceum subsp. africanum chloroplast
24NC_016692ATTCT3542275424014Gossypium herbaceum subsp. africanum chloroplast
25NC_016699ATTCT313929313930614Phyllostachys propinqua chloroplast
26NC_016711ATTCT399961000914Gossypium mustelinum chloroplast
27NC_016711ATTCT3542575427014Gossypium mustelinum chloroplast
28NC_016712ATTCT399871000014Gossypium arboreum chloroplast
29NC_016712ATTCT3541635417614Gossypium arboreum chloroplast
30NC_016718ATTCT313589313590614Rhynchoryza subulata plastid
31NC_016927ATTCT313414513415814Oryza meridionalis chloroplast
32NC_017609ATTCT39053906816Phalaenopsis equestris chloroplast
33NC_017609ATTCT3737817379414Phalaenopsis equestris chloroplast
34NC_017835ATTCT313413113414414Oryza rufipogon chloroplast
35NC_017894ATTCT39957997014Gossypium gossypioides chloroplast
36NC_017894ATTCT3540965410914Gossypium gossypioides chloroplast
37NC_018109ATTCT39876988914Gossypium incanum chloroplast
38NC_018110ATTCT39926993914Gossypium somalense chloroplast
39NC_018111ATTCT399941000714Gossypium capitis-viridis chloroplast
40NC_018111ATTCT3535645357714Gossypium capitis-viridis chloroplast
41NC_018112ATTCT39926993914Gossypium areysianum chloroplast
42NC_018113ATTCT3101101012314Gossypium robinsonii chloroplast
43NC_018114ATTCT3719487196114Erycina pusilla chloroplast
44NC_020319ATTCT3936909370314Cycas revoluta chloroplast
45NC_020341ATTCT313852313853614Arundinaria gigantea chloroplast
46NC_021430ATTCT3377463775914Cymbidium sinense voucher KUN:YJB100605 chloroplast
47NC_021431ATTCT3378443785714Cymbidium tortisepalum voucher KUN:HJL091027 chloroplast
48NC_021936ATTCT3862918630515Najas flexilis chloroplast
49NC_001320ATTCT313411213412514 Oryza sativa Japonica Group plastid
50NC_002762ATTCT313412713414014 Triticum aestivum chloroplast
51NC_005086ATTCT312811712813014 Amborella trichopoda chloroplast
52NC_005973ATTCT313408013409314 Oryza nivara chloroplast
53NC_006050ATTCT34787480115 Nymphaea alba chloroplast
54NC_006861ATTCT311799411800815 Huperzia lucidula chloroplast
55NC_007499ATTCT39029904416 Phalaenopsis aphrodite subsp. formosana chloroplast
56NC_007499ATTCT3737657377814 Phalaenopsis aphrodite subsp. formosana chloroplast
57NC_007944ATTCT399971001014 Gossypium hirsutum chloroplast
58NC_007944ATTCT3542365424914 Gossypium hirsutum chloroplast
59NC_007957ATTCT3307873080115 Vitis vinifera chloroplast
60NC_008155ATTCT313408713410014 Oryza sativa Indica Group chloroplast
61NC_008407ATTCT37850786314 Jasminum nudiflorum chloroplast
62NC_008641ATTCT3100191003214 Gossypium barbadense chloroplast
63NC_008641ATTCT3542955430814 Gossypium barbadense chloroplast
64NC_008788ATTCT34448446215 Nuphar advena chloroplast
65NC_009598ATTCT37713772614 Chloranthus spicatus chloroplast
66NC_009962ATTCT37308732114 Ceratophyllum demersum chloroplast
67NC_011032ATTCT313477913479214 Brachypodium distachyon chloroplast
68NC_011930ATTCT3457344574815 Keteleeria davidiana chloroplast
69NC_012224ATTCT3560285604114 Jatropha curcas chloroplast
70NC_012927ATTCT313893813895114 Bambusa oldhamii chloroplast
71NC_013088ATTCT313899913901214 Dendrocalamus latiflorus chloroplast
72NC_014056ATTCT38410842516 Oncidium Gower Ramsey chloroplast
73NC_014056ATTCT38668868215 Oncidium Gower Ramsey chloroplast