Chloroplast Motifs - Imperfect ACAA Repeats
| S.No | Sequence ID | Motif | Iterations | Start | End | Tract Length | Sequence Name |
| 1 | NC_008117 | ACAA | 51 | 51617 | 51819 | 203 | Zygnema circumcarinatum chloroplast |
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| 2 | NC_015830 | ACAA | 4 | 139477 | 139492 | 16 | Bambusa emeiensis chloroplast |
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| 3 | NC_016063 | ACAA | 4 | 88457 | 88472 | 16 | Cephalotaxus wilsoniana chloroplast DNA |
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| 4 | NC_016986 | ACAA | 4 | 9761 | 9776 | 16 | Ginkgo biloba chloroplast |
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| 5 | NC_019650 | ACAA | 4 | 43648 | 43663 | 16 | Festuca pratensis plastid |
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| 6 | NC_021110 | ACAA | 4 | 87841 | 87856 | 16 | Cephalotaxus oliveri chloroplast |
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| 7 | NC_021372 | ACAA | 4 | 109676 | 109691 | 16 | Pharus latifolius chloroplast |
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| 8 | NC_021425 | ACAA | 4 | 55264 | 55278 | 15 | Tetracentron sinense chloroplast |
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| 9 | NC_021426 | ACAA | 4 | 56431 | 56445 | 15 | Trochodendron aralioides chloroplast |
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| 10 | NC_001319 | ACAA | 4 | 26630 | 26645 | 16 | Marchantia polymorpha chloroplast |
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| 11 | NC_008235 | ACAA | 4 | 51393 | 51407 | 15 | Populus alba chloroplast |
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| 12 | NC_009143 | ACAA | 4 | 51754 | 51768 | 15 | Populus trichocarpa chloroplast |
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| 13 | NC_009599 | ACAA | 4 | 54781 | 54795 | 15 | Buxus microphylla chloroplast |
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| 14 | NC_011713 | ACAA | 4 | 44078 | 44093 | 16 | Festuca arundinacea chloroplast |
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| 15 | NC_011087 | ACAA | 3 | 143937 | 143948 | 12 | Paulinella chromatophora chromatophore |
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| 16 | NC_011087 | ACAA | 3 | 854064 | 854075 | 12 | Paulinella chromatophora chromatophore |
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| 17 | NC_014589 | ACAA | 3 | 34796 | 34806 | 11 | Cathaya argyrophylla chloroplast |
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| 18 | NC_015084 | ACAA | 3 | 47346 | 47357 | 12 | Coccomyxa sp. C-169 plastid |
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| 19 | NC_015084 | ACAA | 3 | 164484 | 164496 | 13 | Coccomyxa sp. C-169 plastid |
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| 20 | NC_015645 | ACAA | 3 | 83199 | 83210 | 12 | Schizomeris leibleinii chloroplast |
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| 21 | NC_015894 | ACAA | 3 | 89101 | 89112 | 12 | Wolffiella lingulata chloroplast |
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| 22 | NC_015899 | ACAA | 3 | 4614 | 4625 | 12 | Wolffia australiana chloroplast |
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| 23 | NC_015983 | ACAA | 3 | 151232 | 151243 | 12 | Cucumis melo subsp. melo chloroplast |
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| 24 | NC_016065 | ACAA | 3 | 110636 | 110647 | 12 | Taiwania cryptomerioides chloroplast DNA |
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| 25 | NC_016471 | ACAA | 3 | 78762 | 78773 | 12 | Neottia nidus-avis plastid |
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| 26 | NC_016728 | ACAA | 3 | 106831 | 106842 | 12 | Silene noctiflora chloroplast |
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| 27 | NC_016729 | ACAA | 3 | 63861 | 63871 | 11 | Silene conica chloroplast |
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| 28 | NC_016732 | ACAA | 3 | 126536 | 126547 | 12 | Dunaliella salina chloroplast |
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| 29 | NC_016732 | ACAA | 3 | 127944 | 127956 | 13 | Dunaliella salina chloroplast |
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| 30 | NC_016735 | ACAA | 3 | 100403 | 100414 | 12 | Fucus vesiculosus chloroplast |
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| 31 | NC_017006 | ACAA | 3 | 60847 | 60858 | 12 | Mankyua chejuensis chloroplast |
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| 32 | NC_017609 | ACAA | 3 | 31748 | 31759 | 12 | Phalaenopsis equestris chloroplast |
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| 33 | NC_018051 | ACAA | 3 | 43107 | 43118 | 12 | Vigna unguiculata chloroplast |
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| 34 | NC_018114 | ACAA | 3 | 38258 | 38269 | 12 | Erycina pusilla chloroplast |
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| 35 | NC_019616 | ACAA | 3 | 106347 | 106358 | 12 | Vaccinium macrocarpon plastid |
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| 36 | NC_020318 | ACAA | 3 | 117894 | 117904 | 11 | Magnolia grandiflora voucher NJ016 chloroplast |
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| 37 | NC_020363 | ACAA | 3 | 143490 | 143501 | 12 | Zingiber spectabile plastid |
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| 38 | NC_020363 | ACAA | 3 | 152664 | 152675 | 12 | Zingiber spectabile plastid |
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| 39 | NC_020438 | ACAA | 3 | 36056 | 36066 | 11 | Gonium pectorale chloroplast |
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| 40 | NC_020438 | ACAA | 3 | 100677 | 100687 | 11 | Gonium pectorale chloroplast |
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| 41 | NC_021091 | ACAA | 3 | 43182 | 43193 | 12 | Vigna angularis chloroplast DNA |
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| 42 | NC_021109 | ACAA | 3 | 46492 | 46502 | 11 | Pleodorina starrii plastid |
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| 43 | NC_021109 | ACAA | 3 | 97154 | 97166 | 13 | Pleodorina starrii plastid |
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| 44 | NC_021111 | ACAA | 3 | 26169 | 26179 | 11 | Cistanche deserticola chloroplast |
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| 45 | NC_021189 | ACAA | 3 | 157718 | 157728 | 11 | Pyropia haitanensis voucher PH-38 chloroplast |
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| 46 | NC_021425 | ACAA | 3 | 118664 | 118675 | 12 | Tetracentron sinense chloroplast |
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| 47 | NC_021429 | ACAA | 3 | 38188 | 38199 | 12 | Cymbidium aloifolium voucher KUN:YJB100604 chloroplast |
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| 48 | NC_021430 | ACAA | 3 | 38230 | 38241 | 12 | Cymbidium sinense voucher KUN:YJB100605 chloroplast |
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| 49 | NC_021431 | ACAA | 3 | 38328 | 38339 | 12 | Cymbidium tortisepalum voucher KUN:HJL091027 chloroplast |
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| 50 | NC_021432 | ACAA | 3 | 37745 | 37756 | 12 | Cymbidium tracyanum voucher KUN:YJB100606 chloroplast |
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| 51 | NC_021433 | ACAA | 3 | 38076 | 38087 | 12 | Cymbidium mannii voucher KUN:YJB100602 chloroplast |
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| 52 | NC_021440 | ACAA | 3 | 110783 | 110794 | 12 | Pinus taeda chloroplast |
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| 53 | NC_021441 | ACAA | 3 | 25729 | 25740 | 12 | Taiwania flousiana chloroplast |
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| 54 | NC_021645 | ACAA | 3 | 32690 | 32700 | 11 | Glycine cyrtoloba voucher CSIRO:G1267 chloroplast |
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| 55 | NC_021646 | ACAA | 3 | 32726 | 32736 | 11 | Glycine stenophita voucher CSIRO:G1974 chloroplast |
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| 56 | NC_000925 | ACAA | 3 | 132375 | 132385 | 11 | Porphyra purpurea chloroplast |
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| 57 | NC_001603 | ACAA | 3 | 22849 | 22859 | 11 | Euglena gracilis chloroplast |
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| 58 | NC_001675 | ACAA | 3 | 56754 | 56764 | 11 | Cyanophora paradoxa cyanelle |
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| 59 | NC_001675 | ACAA | 3 | 120756 | 120767 | 12 | Cyanophora paradoxa cyanelle |
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| 60 | NC_001713 | ACAA | 3 | 30339 | 30350 | 12 | Odontella sinensis chloroplast |
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| 61 | NC_001865 | ACAA | 3 | 14627 | 14638 | 12 | Chlorella vulgaris chloroplast |
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| 62 | NC_001865 | ACAA | 3 | 44946 | 44957 | 12 | Chlorella vulgaris chloroplast |
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| 63 | NC_002202 | ACAA | 3 | 148372 | 148383 | 12 | Spinacia oleracea plastid |
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| 64 | NC_002693 | ACAA | 3 | 73625 | 73636 | 12 | Oenothera elata subsp. hookeri plastid plastome I |
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| 65 | NC_004677 | ACAA | 3 | 35239 | 35250 | 12 | Pinus koraiensis chloroplast |
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| 66 | NC_006861 | ACAA | 3 | 34575 | 34586 | 12 | Huperzia lucidula chloroplast |
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| 67 | NC_007144 | ACAA | 3 | 151323 | 151334 | 12 | Cucumis sativus chloroplast |
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| 68 | NC_008101 | ACAA | 3 | 46432 | 46443 | 12 | Scenedesmus obliquus chloroplast |
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| 69 | NC_008101 | ACAA | 3 | 55317 | 55328 | 12 | Scenedesmus obliquus chloroplast |
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| 70 | NC_008101 | ACAA | 3 | 65110 | 65120 | 11 | Scenedesmus obliquus chloroplast |
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| 71 | NC_008101 | ACAA | 3 | 120196 | 120206 | 11 | Scenedesmus obliquus chloroplast |
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| 72 | NC_008101 | ACAA | 3 | 160151 | 160162 | 12 | Scenedesmus obliquus chloroplast |
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| 73 | NC_008114 | ACAA | 3 | 42057 | 42068 | 12 | Pseudendoclonium akinetum chloroplast |
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| 74 | NC_008114 | ACAA | 3 | 42416 | 42427 | 12 | Pseudendoclonium akinetum chloroplast |
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| 75 | NC_008114 | ACAA | 3 | 155955 | 155966 | 12 | Pseudendoclonium akinetum chloroplast |
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| 76 | NC_008117 | ACAA | 3 | 109206 | 109217 | 12 | Zygnema circumcarinatum chloroplast |
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| 77 | NC_008335 | ACAA | 3 | 120762 | 120773 | 12 | Platanus occidentalis chloroplast |
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| 78 | NC_008372 | ACAA | 3 | 5510 | 5520 | 11 | Stigeoclonium helveticum chloroplast |
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| 79 | NC_008372 | ACAA | 3 | 63841 | 63851 | 11 | Stigeoclonium helveticum chloroplast |
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| 80 | NC_008408 | ACAA | 3 | 55716 | 55727 | 12 | Bigelowiella natans plastid |
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| 81 | NC_008457 | ACAA | 3 | 117113 | 117123 | 11 | Piper cenocladum chloroplast |
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| 82 | NC_008822 | ACAA | 3 | 45679 | 45690 | 12 | Chlorokybus atmophyticus chloroplast |
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| 83 | NC_009259 | ACAA | 3 | 136916 | 136927 | 12 | Phaseolus vulgaris chloroplast |
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| 84 | NC_009573 | ACAA | 3 | 61358 | 61368 | 11 | Rhodomonas salina chloroplast |
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| 85 | NC_009601 | ACAA | 3 | 73919 | 73930 | 12 | Dioscorea elephantipes chloroplast |
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| 86 | NC_009681 | ACAA | 3 | 167472 | 167482 | 11 | Leptosira terrestris chloroplast |
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| 87 | NC_009765 | ACAA | 3 | 61843 | 61854 | 12 | Cuscuta gronovii chloroplast |
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| 88 | NC_009949 | ACAA | 3 | 60854 | 60865 | 12 | Cuscuta obtusiflora chloroplast |
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| 89 | NC_009962 | ACAA | 3 | 33562 | 33572 | 11 | Ceratophyllum demersum chloroplast |
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| 90 | NC_010358 | ACAA | 3 | 72643 | 72654 | 12 | Oenothera argillicola chloroplast |
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| 91 | NC_010360 | ACAA | 3 | 73719 | 73730 | 12 | Oenothera glazioviana chloroplast |
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| 92 | NC_010361 | ACAA | 3 | 73153 | 73164 | 12 | Oenothera biennis chloroplast |
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| 93 | NC_010362 | ACAA | 3 | 72027 | 72038 | 12 | Oenothera parviflora chloroplast |
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| 94 | NC_010548 | ACAA | 3 | 18834 | 18846 | 13 | Cryptomeria japonica chloroplast |
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| 95 | NC_010772 | ACAA | 3 | 55878 | 55888 | 11 | Heterosigma akashiwo chloroplast |
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| 96 | NC_010772 | ACAA | 3 | 58813 | 58824 | 12 | Heterosigma akashiwo chloroplast |
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| 97 | NC_010772 | ACAA | 3 | 130874 | 130884 | 11 | Heterosigma akashiwo chloroplast |
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| 98 | NC_011156 | ACAA | 3 | 35320 | 35331 | 12 | Pinus lambertiana chloroplast |
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| 99 | NC_011600 | ACAA | 3 | 61897 | 61907 | 11 | Vaucheria litorea chloroplast |
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| 100 | NC_011942 | ACAA | 3 | 95731 | 95741 | 11 | Gnetum parvifolium chloroplast |
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| 101 | NC_012099 | ACAA | 3 | 80075 | 80085 | 11 | Pyramimonas parkeae chloroplast |
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| 102 | NC_012101 | ACAA | 3 | 56191 | 56202 | 12 | Monomastix sp. OKE-1 chloroplast |
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| 103 | NC_012224 | ACAA | 3 | 159114 | 159125 | 12 | Jatropha curcas chloroplast |
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| 104 | NC_012898 | ACAA | 3 | 41602 | 41613 | 12 | Aureococcus anophagefferens chloroplast |
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| 105 | NC_012898 | ACAA | 3 | 75325 | 75336 | 12 | Aureococcus anophagefferens chloroplast |
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| 106 | NC_012978 | ACAA | 3 | 66445 | 66455 | 11 | Parachlorella kessleri chloroplast |
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| 107 | NC_012978 | ACAA | 3 | 82210 | 82221 | 12 | Parachlorella kessleri chloroplast |
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| 108 | NC_013843 | ACAA | 3 | 43131 | 43142 | 12 | Vigna radiata chloroplast |
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| 109 | NC_014056 | ACAA | 3 | 36836 | 36847 | 12 | Oncidium Gower Ramsey chloroplast |
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