Chloroplast Motifs - Imperfect AGAT Repeats
| S.No | Sequence ID | Motif | Iterations | Start | End | Tract Length | Sequence Name |
| 1 | NC_014699 | AGAT | 4 | 129987 | 130002 | 16 | Equisetum arvense chloroplast |
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| 2 | NC_016708 | AGAT | 4 | 134083 | 134098 | 16 | Millettia pinnata chloroplast |
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| 3 | NC_020146 | AGAT | 4 | 128443 | 128458 | 16 | Equisetum hyemale chloroplast |
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| 4 | NC_011087 | AGAT | 3 | 435186 | 435197 | 12 | Paulinella chromatophora chromatophore |
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| 5 | NC_014340 | AGAT | 3 | 31340 | 31351 | 12 | Chromera velia strain CCMP2878 chloroplast |
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| 6 | NC_014345 | AGAT | 3 | 7694 | 7705 | 12 | Alveolata sp. CCMP3155 chloroplast |
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| 7 | NC_014575 | AGAT | 3 | 73168 | 73179 | 12 | Cedrus deodara chloroplast |
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| 8 | NC_014674 | AGAT | 3 | 102459 | 102469 | 11 | Castanea mollissima chloroplast |
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| 9 | NC_014874 | AGAT | 3 | 19043 | 19053 | 11 | Rhizanthella gardneri plastid |
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| 10 | NC_015113 | AGAT | 3 | 43089 | 43099 | 11 | Anthriscus cerefolium chloroplast |
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| 11 | NC_015894 | AGAT | 3 | 123756 | 123768 | 13 | Wolffiella lingulata chloroplast |
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| 12 | NC_016058 | AGAT | 3 | 84294 | 84305 | 12 | Larix decidua chloroplast |
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| 13 | NC_016063 | AGAT | 3 | 98591 | 98603 | 13 | Cephalotaxus wilsoniana chloroplast DNA |
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| 14 | NC_016065 | AGAT | 3 | 93069 | 93079 | 11 | Taiwania cryptomerioides chloroplast DNA |
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| 15 | NC_016069 | AGAT | 3 | 68764 | 68774 | 11 | Picea morrisonicola chloroplast |
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| 16 | NC_016708 | AGAT | 3 | 95561 | 95571 | 11 | Millettia pinnata chloroplast |
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| 17 | NC_016727 | AGAT | 3 | 7363 | 7373 | 11 | Silene vulgaris chloroplast |
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| 18 | NC_016728 | AGAT | 3 | 7449 | 7459 | 11 | Silene noctiflora chloroplast |
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| 19 | NC_016729 | AGAT | 3 | 7386 | 7396 | 11 | Silene conica chloroplast |
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| 20 | NC_016729 | AGAT | 3 | 141414 | 141425 | 12 | Silene conica chloroplast |
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| 21 | NC_016730 | AGAT | 3 | 7403 | 7413 | 11 | Silene latifolia chloroplast |
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| 22 | NC_016732 | AGAT | 3 | 267976 | 267986 | 11 | Dunaliella salina chloroplast |
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| 23 | NC_016736 | AGAT | 3 | 4104 | 4115 | 12 | Ricinus communis chloroplast |
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| 24 | NC_016986 | AGAT | 3 | 103215 | 103225 | 11 | Ginkgo biloba chloroplast |
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| 25 | NC_018051 | AGAT | 3 | 94048 | 94058 | 11 | Vigna unguiculata chloroplast |
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| 26 | NC_018117 | AGAT | 3 | 129915 | 129926 | 12 | Datura stramonium chloroplast |
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| 27 | NC_018569 | AGAT | 3 | 12835 | 12846 | 12 | Trebouxiophyceae sp. MX-AZ01 chloroplast |
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| 28 | NC_019616 | AGAT | 3 | 143216 | 143228 | 13 | Vaccinium macrocarpon plastid |
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| 29 | NC_019628 | AGAT | 3 | 4555 | 4565 | 11 | Pellia endiviifolia chloroplast |
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| 30 | NC_019648 | AGAT | 3 | 101262 | 101273 | 12 | Festuca altissima plastid |
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| 31 | NC_020019 | AGAT | 3 | 6710 | 6721 | 12 | Camellia sinensis chloroplast |
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| 32 | NC_020019 | AGAT | 3 | 116900 | 116912 | 13 | Camellia sinensis chloroplast |
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| 33 | NC_020152 | AGAT | 3 | 102588 | 102598 | 11 | Quercus rubra plastid |
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| 34 | NC_020319 | AGAT | 3 | 125495 | 125505 | 11 | Cycas revoluta chloroplast |
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| 35 | NC_020367 | AGAT | 3 | 61486 | 61496 | 11 | Dasypogon bromeliifolius plastid |
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| 36 | NC_021075 | AGAT | 3 | 4199 | 4210 | 12 | Calliarthron tuberculosum chloroplast |
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| 37 | NC_021075 | AGAT | 3 | 163498 | 163508 | 11 | Calliarthron tuberculosum chloroplast |
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| 38 | NC_021091 | AGAT | 3 | 94452 | 94462 | 11 | Vigna angularis chloroplast DNA |
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| 39 | NC_021109 | AGAT | 3 | 141763 | 141773 | 11 | Pleodorina starrii plastid |
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| 40 | NC_021189 | AGAT | 3 | 160443 | 160454 | 12 | Pyropia haitanensis voucher PH-38 chloroplast |
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| 41 | NC_021372 | AGAT | 3 | 15631 | 15642 | 12 | Pharus latifolius chloroplast |
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| 42 | NC_021425 | AGAT | 3 | 6696 | 6707 | 12 | Tetracentron sinense chloroplast |
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| 43 | NC_021437 | AGAT | 3 | 81124 | 81134 | 11 | Cunninghamia lanceolata chloroplast |
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| 44 | NC_021441 | AGAT | 3 | 92112 | 92122 | 11 | Taiwania flousiana chloroplast |
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| 45 | NC_021449 | AGAT | 3 | 72224 | 72235 | 12 | Utricularia gibba chloroplast |
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| 46 | NC_021636 | AGAT | 3 | 96009 | 96019 | 11 | Glycine tomentella voucher CSIRO:G1403 chloroplast |
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| 47 | NC_021645 | AGAT | 3 | 95865 | 95875 | 11 | Glycine cyrtoloba voucher CSIRO:G1267 chloroplast |
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| 48 | NC_021646 | AGAT | 3 | 96175 | 96185 | 11 | Glycine stenophita voucher CSIRO:G1974 chloroplast |
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| 49 | NC_021647 | AGAT | 3 | 95797 | 95807 | 11 | Glycine canescens voucher CSIRO:G1232 chloroplast |
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| 50 | NC_021648 | AGAT | 3 | 96051 | 96061 | 11 | Glycine dolichocarpa voucher CSIRO:G1134 chloroplast |
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| 51 | NC_021649 | AGAT | 3 | 96274 | 96284 | 11 | Glycine falcata voucher CSIRO:G1718 chloroplast |
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| 52 | NC_021650 | AGAT | 3 | 96062 | 96072 | 11 | Glycine syndetika voucher CSIRO:G1300 chloroplast |
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| 53 | NC_022099 | AGAT | 3 | 54317 | 54329 | 13 | Medicago truncatula cultivar Jemalong 2HA plastid |
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| 54 | NC_022100 | AGAT | 3 | 54382 | 54394 | 13 | Medicago truncatula cultivar Borung plastid |
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| 55 | NC_001666 | AGAT | 3 | 110050 | 110061 | 12 | Zea mays chloroplast |
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| 56 | NC_002693 | AGAT | 3 | 100708 | 100718 | 11 | Oenothera elata subsp. hookeri plastid plastome I |
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| 57 | NC_002694 | AGAT | 3 | 94290 | 94300 | 11 | Lotus japonicus chloroplast |
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| 58 | NC_003119 | AGAT | 3 | 54317 | 54329 | 13 | Medicago truncatula chloroplast |
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| 59 | NC_003386 | AGAT | 3 | 102951 | 102962 | 12 | Psilotum nudum chloroplast |
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| 60 | NC_003386 | AGAT | 3 | 120499 | 120510 | 12 | Psilotum nudum chloroplast |
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| 61 | NC_004543 | AGAT | 3 | 43513 | 43524 | 12 | Anthoceros formosae chloroplast |
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| 62 | NC_004766 | AGAT | 3 | 45052 | 45063 | 12 | Adiantum capillus-veneris chloroplast |
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| 63 | NC_005087 | AGAT | 3 | 85307 | 85317 | 11 | Physcomitrella patens subsp. patens chloroplast |
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| 64 | NC_006861 | AGAT | 3 | 102364 | 102374 | 11 | Huperzia lucidula chloroplast |
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| 65 | NC_007932 | AGAT | 3 | 142299 | 142309 | 11 | Porphyra yezoensis chloroplast |
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| 66 | NC_007942 | AGAT | 3 | 95415 | 95425 | 11 | Glycine max chloroplast |
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| 67 | NC_008336 | AGAT | 3 | 131367 | 131377 | 11 | Nandina domestica chloroplast |
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| 68 | NC_008372 | AGAT | 3 | 133303 | 133314 | 12 | Stigeoclonium helveticum chloroplast |
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| 69 | NC_008407 | AGAT | 3 | 82856 | 82867 | 12 | Jasminum nudiflorum chloroplast |
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| 70 | NC_008457 | AGAT | 3 | 31135 | 31146 | 12 | Piper cenocladum chloroplast |
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| 71 | NC_008535 | AGAT | 3 | 115260 | 115271 | 12 | Coffea arabica chloroplast |
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| 72 | NC_008788 | AGAT | 3 | 76446 | 76457 | 12 | Nuphar advena chloroplast |
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| 73 | NC_008796 | AGAT | 3 | 4464 | 4475 | 12 | Ranunculus macranthus chloroplast |
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| 74 | NC_008829 | AGAT | 3 | 97755 | 97765 | 11 | Angiopteris evecta chloroplast |
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| 75 | NC_009259 | AGAT | 3 | 92965 | 92975 | 11 | Phaseolus vulgaris chloroplast |
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| 76 | NC_009265 | AGAT | 3 | 6460 | 6470 | 11 | Aethionema cordifolium chloroplast |
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| 77 | NC_009265 | AGAT | 3 | 13637 | 13649 | 13 | Aethionema cordifolium chloroplast |
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| 78 | NC_009272 | AGAT | 3 | 72555 | 72566 | 12 | Draba nemorosa chloroplast |
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| 79 | NC_009600 | AGAT | 3 | 5141 | 5152 | 12 | Illicium oligandrum chloroplast |
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| 80 | NC_009618 | AGAT | 3 | 81051 | 81062 | 12 | Cycas taitungensis chloroplast |
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| 81 | NC_009618 | AGAT | 3 | 101487 | 101497 | 11 | Cycas taitungensis chloroplast |
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| 82 | NC_009681 | AGAT | 3 | 3383 | 3395 | 13 | Leptosira terrestris chloroplast |
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| 83 | NC_009765 | AGAT | 3 | 81678 | 81689 | 12 | Cuscuta gronovii chloroplast |
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| 84 | NC_009766 | AGAT | 3 | 120110 | 120121 | 12 | Cuscuta reflexa chloroplast |
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| 85 | NC_009808 | AGAT | 3 | 65835 | 65846 | 12 | Ipomoea purpurea chloroplast |
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| 86 | NC_009808 | AGAT | 3 | 156118 | 156129 | 12 | Ipomoea purpurea chloroplast |
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| 87 | NC_009949 | AGAT | 3 | 80237 | 80248 | 12 | Cuscuta obtusiflora chloroplast |
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| 88 | NC_009963 | AGAT | 3 | 123965 | 123976 | 12 | Cuscuta exaltata chloroplast |
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| 89 | NC_010358 | AGAT | 3 | 99933 | 99943 | 11 | Oenothera argillicola chloroplast |
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| 90 | NC_010360 | AGAT | 3 | 101100 | 101110 | 11 | Oenothera glazioviana chloroplast |
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| 91 | NC_010361 | AGAT | 3 | 100169 | 100179 | 11 | Oenothera biennis chloroplast |
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| 92 | NC_010362 | AGAT | 3 | 98887 | 98897 | 11 | Oenothera parviflora chloroplast |
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| 93 | NC_010654 | AGAT | 3 | 36543 | 36553 | 11 | Welwitschia mirabilis chloroplast |
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| 94 | NC_010776 | AGAT | 3 | 117539 | 117550 | 12 | Fagopyrum esculentum subsp. ancestrale chloroplast |
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| 95 | NC_011163 | AGAT | 3 | 66346 | 66356 | 11 | Cicer arietinum chloroplast |
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| 96 | NC_011163 | AGAT | 3 | 94231 | 94241 | 11 | Cicer arietinum chloroplast |
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| 97 | NC_012818 | AGAT | 3 | 121663 | 121674 | 12 | Alsophila spinulosa chloroplast |
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| 98 | NC_013273 | AGAT | 3 | 60809 | 60820 | 12 | Coix lacryma-jobi chloroplast |
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| 99 | NC_013843 | AGAT | 3 | 94072 | 94082 | 11 | Vigna radiata chloroplast |
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| 100 | NC_014063 | AGAT | 3 | 115936 | 115946 | 11 | Lathyrus sativus chloroplast |
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