Chloroplast Motifs - Imperfect TCCGG Repeats
S.No | Sequence ID | Motif | Iterations | Start | End | Tract Length | Sequence Name |
---|---|---|---|---|---|---|---|
1 | NC_014570 | TCCGG | 3 | 99338 | 99352 | 15 | Eucalyptus grandis chloroplast |
2 | NC_014676 | TCCGG | 3 | 99927 | 99941 | 15 | Theobroma cacao chloroplast |
3 | NC_014697 | TCCGG | 3 | 96576 | 96590 | 15 | Prunus persica chloroplast |
4 | NC_015113 | TCCGG | 3 | 94522 | 94536 | 15 | Anthriscus cerefolium chloroplast |
5 | NC_015139 | TCCGG | 3 | 93866 | 93880 | 15 | Brassica rapa subsp. pekinensis chloroplast |
6 | NC_015204 | TCCGG | 3 | 99312 | 99326 | 15 | Gossypium thurberi chloroplast |
7 | NC_015206 | TCCGG | 3 | 95988 | 96002 | 15 | Fragaria vesca subsp. vesca chloroplast |
8 | NC_015308 | TCCGG | 3 | 99963 | 99977 | 15 | Hevea brasiliensis chloroplast |
9 | NC_015401 | TCCGG | 3 | 96782 | 96796 | 15 | Olea europaea subsp. europaea plastid |
10 | NC_015604 | TCCGG | 3 | 96790 | 96804 | 15 | Olea europaea subsp. cuspidata chloroplast |
11 | NC_015605 | TCCGG | 3 | 102364 | 102378 | 15 | Nelumbo lutea chloroplast |
12 | NC_015608 | TCCGG | 3 | 96873 | 96887 | 15 | Olea woodiana subsp. woodiana chloroplast |
13 | NC_015610 | TCCGG | 3 | 102469 | 102483 | 15 | Nelumbo nucifera chloroplast |
14 | NC_015621 | TCCGG | 3 | 94649 | 94663 | 15 | Ageratina adenophora chloroplast |
15 | NC_015623 | TCCGG | 3 | 96801 | 96815 | 15 | Olea europaea subsp. maroccana chloroplast |
16 | NC_015892 | TCCGG | 3 | 98534 | 98548 | 15 | Magnolia kwangsiensis chloroplast |
17 | NC_015996 | TCCGG | 3 | 98458 | 98472 | 15 | Pyrus pyrifolia chloroplast |
18 | NC_016430 | TCCGG | 3 | 96496 | 96510 | 15 | Eleutherococcus senticosus chloroplast |
19 | NC_016433 | TCCGG | 3 | 94840 | 94854 | 15 | Sesamum indicum chloroplast |
20 | NC_016668 | TCCGG | 3 | 99276 | 99290 | 15 | Gossypium raimondii chloroplast |
21 | NC_016670 | TCCGG | 3 | 99456 | 99470 | 15 | Gossypium darwinii chloroplast |
22 | NC_016690 | TCCGG | 3 | 99482 | 99496 | 15 | Gossypium tomentosum chloroplast |
23 | NC_016692 | TCCGG | 3 | 99344 | 99358 | 15 | Gossypium herbaceum subsp. africanum chloroplast |
24 | NC_016711 | TCCGG | 3 | 99373 | 99387 | 15 | Gossypium mustelinum chloroplast |
25 | NC_016712 | TCCGG | 3 | 99276 | 99290 | 15 | Gossypium arboreum chloroplast |
26 | NC_016734 | TCCGG | 3 | 93615 | 93629 | 15 | Brassica napus chloroplast |
27 | NC_016736 | TCCGG | 3 | 100994 | 101008 | 15 | Ricinus communis chloroplast |
28 | NC_016753 | TCCGG | 3 | 100438 | 100452 | 15 | Colocasia esculenta chloroplast |
29 | NC_016921 | TCCGG | 3 | 95637 | 95651 | 15 | Pentactina rupicola chloroplast |
30 | NC_017602 | TCCGG | 3 | 96152 | 96166 | 15 | Elaeis guineensis chloroplast |
31 | NC_017894 | TCCGG | 3 | 99355 | 99369 | 15 | Gossypium gossypioides chloroplast |
32 | NC_018109 | TCCGG | 3 | 98443 | 98457 | 15 | Gossypium incanum chloroplast |
33 | NC_018110 | TCCGG | 3 | 98720 | 98734 | 15 | Gossypium somalense chloroplast |
34 | NC_018111 | TCCGG | 3 | 98653 | 98667 | 15 | Gossypium capitis-viridis chloroplast |
35 | NC_018112 | TCCGG | 3 | 98752 | 98766 | 15 | Gossypium areysianum chloroplast |
36 | NC_018113 | TCCGG | 3 | 99064 | 99078 | 15 | Gossypium robinsonii chloroplast |
37 | NC_018114 | TCCGG | 3 | 94572 | 94586 | 15 | Erycina pusilla chloroplast |
38 | NC_018357 | TCCGG | 3 | 98641 | 98655 | 15 | Magnolia denudata chloroplast |
39 | NC_018565 | TCCGG | 3 | 94500 | 94514 | 15 | Pachycladon enysii chloroplast |
40 | NC_018766 | TCCGG | 3 | 96038 | 96052 | 15 | Fragaria vesca subsp. bracteata chloroplast |
41 | NC_018767 | TCCGG | 3 | 96050 | 96064 | 15 | Fragaria mandshurica plastid |
42 | NC_019601 | TCCGG | 3 | 95942 | 95956 | 15 | Fragaria chiloensis chloroplast |
43 | NC_019602 | TCCGG | 3 | 95961 | 95975 | 15 | Fragaria virginiana chloroplast |
44 | NC_020019 | TCCGG | 3 | 96930 | 96944 | 15 | Camellia sinensis chloroplast |
45 | NC_020092 | TCCGG | 3 | 92763 | 92777 | 15 | Chrysanthemum x morifolium chloroplast |
46 | NC_020316 | TCCGG | 3 | 98750 | 98764 | 15 | Magnolia officinalis chloroplast |
47 | NC_020317 | TCCGG | 3 | 98726 | 98740 | 15 | Magnolia officinalis subsp. biloba voucher SC001 chloroplast |
48 | NC_020318 | TCCGG | 3 | 98286 | 98300 | 15 | Magnolia grandiflora voucher NJ016 chloroplast |
49 | NC_020320 | TCCGG | 3 | 92712 | 92726 | 15 | Chrysanthemum indicum voucher HeN001 chloroplast |
50 | NC_020362 | TCCGG | 3 | 100716 | 100730 | 15 | Heliconia collinsiana plastid |
51 | NC_020363 | TCCGG | 3 | 96224 | 96238 | 15 | Zingiber spectabile plastid |
52 | NC_020365 | TCCGG | 3 | 96668 | 96682 | 15 | Calamus caryotoides plastid |
53 | NC_020366 | TCCGG | 3 | 97529 | 97543 | 15 | Bismarckia nobilis plastid |
54 | NC_020367 | TCCGG | 3 | 97401 | 97415 | 15 | Dasypogon bromeliifolius plastid |
55 | NC_020607 | TCCGG | 3 | 92710 | 92724 | 15 | Artemisia frigida chloroplast |
56 | NC_021101 | TCCGG | 3 | 96578 | 96592 | 15 | Francoa sonchifolia plastid |
57 | NC_021423 | TCCGG | 3 | 95974 | 95988 | 15 | Catharanthus roseus cultivar Pacifica Punch Halo chloroplast |
58 | NC_021425 | TCCGG | 3 | 98830 | 98844 | 15 | Tetracentron sinense chloroplast |
59 | NC_021426 | TCCGG | 3 | 99960 | 99974 | 15 | Trochodendron aralioides chloroplast |
60 | NC_021455 | TCCGG | 3 | 95776 | 95790 | 15 | Prinsepia utilis plastid |
61 | NC_000932 | TCCGG | 3 | 94768 | 94782 | 15 | Arabidopsis thaliana chloroplast |
62 | NC_004993 | TCCGG | 3 | 95902 | 95916 | 15 | Calycanthus floridus var. glaucus chloroplast |
63 | NC_006050 | TCCGG | 3 | 100444 | 100458 | 15 | Nymphaea alba chloroplast |
64 | NC_006290 | TCCGG | 3 | 95806 | 95820 | 15 | Panax ginseng chloroplast |
65 | NC_007578 | TCCGG | 3 | 94062 | 94076 | 15 | Lactuca sativa chloroplast |
66 | NC_007944 | TCCGG | 3 | 99367 | 99381 | 15 | Gossypium hirsutum chloroplast |
67 | NC_007957 | TCCGG | 3 | 99760 | 99774 | 15 | Vitis vinifera chloroplast |
68 | NC_007977 | TCCGG | 3 | 93093 | 93107 | 15 | Helianthus annuus chloroplast |
69 | NC_008115 | TCCGG | 3 | 99465 | 99479 | 15 | Eucalyptus globulus subsp. globulus chloroplast |
70 | NC_008235 | TCCGG | 3 | 95687 | 95701 | 15 | Populus alba chloroplast |
71 | NC_008325 | TCCGG | 3 | 93807 | 93821 | 15 | Daucus carota chloroplast |
72 | NC_008326 | TCCGG | 3 | 98657 | 98671 | 15 | Liriodendron tulipifera chloroplast |
73 | NC_008334 | TCCGG | 3 | 98887 | 98901 | 15 | Citrus sinensis chloroplast |
74 | NC_008335 | TCCGG | 3 | 102164 | 102178 | 15 | Platanus occidentalis chloroplast |
75 | NC_008336 | TCCGG | 3 | 96050 | 96064 | 15 | Nandina domestica chloroplast |
76 | NC_008359 | TCCGG | 3 | 97509 | 97523 | 15 | Morus indica chloroplast |
77 | NC_008407 | TCCGG | 3 | 102297 | 102311 | 15 | Jasminum nudiflorum chloroplast |
78 | NC_008454 | TCCGG | 3 | 184492 | 184506 | 15 | Pelargonium x hortorum chloroplast |
79 | NC_008456 | TCCGG | 3 | 99626 | 99640 | 15 | Drimys granadensis chloroplast |
80 | NC_008535 | TCCGG | 3 | 95436 | 95450 | 15 | Coffea arabica chloroplast |
81 | NC_008641 | TCCGG | 3 | 99397 | 99411 | 15 | Gossypium barbadense chloroplast |
82 | NC_009143 | TCCGG | 3 | 96208 | 96222 | 15 | Populus trichocarpa chloroplast |
83 | NC_009265 | TCCGG | 3 | 94021 | 94035 | 15 | Aethionema cordifolium chloroplast |
84 | NC_009266 | TCCGG | 3 | 94061 | 94075 | 15 | Aethionema grandiflorum chloroplast |
85 | NC_009267 | TCCGG | 3 | 94469 | 94483 | 15 | Olimarabidopsis pumila chloroplast |
86 | NC_009268 | TCCGG | 3 | 93416 | 93430 | 15 | Arabis hirsuta chloroplast |
87 | NC_009269 | TCCGG | 3 | 94017 | 94031 | 15 | Barbarea verna chloroplast |
88 | NC_009270 | TCCGG | 3 | 94312 | 94326 | 15 | Capsella bursa-pastoris chloroplast |
89 | NC_009271 | TCCGG | 3 | 94716 | 94730 | 15 | Crucihimalaya wallichii chloroplast |
90 | NC_009272 | TCCGG | 3 | 92992 | 93006 | 15 | Draba nemorosa chloroplast |
91 | NC_009273 | TCCGG | 3 | 94599 | 94613 | 15 | Lepidium virginicum chloroplast |
92 | NC_009274 | TCCGG | 3 | 92990 | 93004 | 15 | Lobularia maritima chloroplast |
93 | NC_009275 | TCCGG | 3 | 94861 | 94875 | 15 | Nasturtium officinale chloroplast |
94 | NC_009598 | TCCGG | 3 | 97131 | 97145 | 15 | Chloranthus spicatus chloroplast |
95 | NC_009600 | TCCGG | 3 | 97924 | 97938 | 15 | Illicium oligandrum chloroplast |
96 | NC_009601 | TCCGG | 3 | 93276 | 93290 | 15 | Dioscorea elephantipes chloroplast |
97 | NC_010323 | TCCGG | 3 | 99420 | 99434 | 15 | Carica papaya chloroplast |
98 | NC_010433 | TCCGG | 3 | 100165 | 100179 | 15 | Manihot esculenta chloroplast |
99 | NC_010601 | TCCGG | 3 | 93526 | 93540 | 15 | Guizotia abyssinica chloroplast |
100 | NC_012224 | TCCGG | 3 | 102245 | 102259 | 15 | Jatropha curcas chloroplast |
101 | NC_012615 | TCCGG | 3 | 98976 | 98990 | 15 | Megaleranthis saniculifolia chloroplast |
102 | NC_013553 | TCCGG | 3 | 94615 | 94629 | 15 | Parthenium argentatum chloroplast |
103 | NC_013823 | TCCGG | 3 | 100337 | 100351 | 15 | Typha latifolia chloroplast |
104 | NC_013991 | TCCGG | 3 | 97341 | 97355 | 15 | Phoenix dactylifera chloroplast |
105 | NC_013707 | TCCGG | 3 | 96768 | 96782 | 15 | Olea europaea chloroplast |