ChloroMitoSSRDB 2.0 Webserver cum Database of Cholorplast and Mitochondrial Microsatellites

Back To Motif Summary

Chloroplast Motifs - Imperfect TCCGG Repeats

S.NoSequence IDMotifIterationsStartEndTract LengthSequence Name
1NC_014570TCCGG3993389935215Eucalyptus grandis chloroplast
2NC_014676TCCGG3999279994115Theobroma cacao chloroplast
3NC_014697TCCGG3965769659015Prunus persica chloroplast
4NC_015113TCCGG3945229453615Anthriscus cerefolium chloroplast
5NC_015139TCCGG3938669388015Brassica rapa subsp. pekinensis chloroplast
6NC_015204TCCGG3993129932615Gossypium thurberi chloroplast
7NC_015206TCCGG3959889600215Fragaria vesca subsp. vesca chloroplast
8NC_015308TCCGG3999639997715Hevea brasiliensis chloroplast
9NC_015401TCCGG3967829679615Olea europaea subsp. europaea plastid
10NC_015604TCCGG3967909680415Olea europaea subsp. cuspidata chloroplast
11NC_015605TCCGG310236410237815Nelumbo lutea chloroplast
12NC_015608TCCGG3968739688715Olea woodiana subsp. woodiana chloroplast
13NC_015610TCCGG310246910248315Nelumbo nucifera chloroplast
14NC_015621TCCGG3946499466315Ageratina adenophora chloroplast
15NC_015623TCCGG3968019681515Olea europaea subsp. maroccana chloroplast
16NC_015892TCCGG3985349854815Magnolia kwangsiensis chloroplast
17NC_015996TCCGG3984589847215Pyrus pyrifolia chloroplast
18NC_016430TCCGG3964969651015Eleutherococcus senticosus chloroplast
19NC_016433TCCGG3948409485415Sesamum indicum chloroplast
20NC_016668TCCGG3992769929015Gossypium raimondii chloroplast
21NC_016670TCCGG3994569947015Gossypium darwinii chloroplast
22NC_016690TCCGG3994829949615Gossypium tomentosum chloroplast
23NC_016692TCCGG3993449935815Gossypium herbaceum subsp. africanum chloroplast
24NC_016711TCCGG3993739938715Gossypium mustelinum chloroplast
25NC_016712TCCGG3992769929015Gossypium arboreum chloroplast
26NC_016734TCCGG3936159362915Brassica napus chloroplast
27NC_016736TCCGG310099410100815Ricinus communis chloroplast
28NC_016753TCCGG310043810045215Colocasia esculenta chloroplast
29NC_016921TCCGG3956379565115Pentactina rupicola chloroplast
30NC_017602TCCGG3961529616615Elaeis guineensis chloroplast
31NC_017894TCCGG3993559936915Gossypium gossypioides chloroplast
32NC_018109TCCGG3984439845715Gossypium incanum chloroplast
33NC_018110TCCGG3987209873415Gossypium somalense chloroplast
34NC_018111TCCGG3986539866715Gossypium capitis-viridis chloroplast
35NC_018112TCCGG3987529876615Gossypium areysianum chloroplast
36NC_018113TCCGG3990649907815Gossypium robinsonii chloroplast
37NC_018114TCCGG3945729458615Erycina pusilla chloroplast
38NC_018357TCCGG3986419865515Magnolia denudata chloroplast
39NC_018565TCCGG3945009451415Pachycladon enysii chloroplast
40NC_018766TCCGG3960389605215Fragaria vesca subsp. bracteata chloroplast
41NC_018767TCCGG3960509606415Fragaria mandshurica plastid
42NC_019601TCCGG3959429595615Fragaria chiloensis chloroplast
43NC_019602TCCGG3959619597515Fragaria virginiana chloroplast
44NC_020019TCCGG3969309694415Camellia sinensis chloroplast
45NC_020092TCCGG3927639277715Chrysanthemum x morifolium chloroplast
46NC_020316TCCGG3987509876415Magnolia officinalis chloroplast
47NC_020317TCCGG3987269874015Magnolia officinalis subsp. biloba voucher SC001 chloroplast
48NC_020318TCCGG3982869830015Magnolia grandiflora voucher NJ016 chloroplast
49NC_020320TCCGG3927129272615Chrysanthemum indicum voucher HeN001 chloroplast
50NC_020362TCCGG310071610073015Heliconia collinsiana plastid
51NC_020363TCCGG3962249623815Zingiber spectabile plastid
52NC_020365TCCGG3966689668215Calamus caryotoides plastid
53NC_020366TCCGG3975299754315Bismarckia nobilis plastid
54NC_020367TCCGG3974019741515Dasypogon bromeliifolius plastid
55NC_020607TCCGG3927109272415Artemisia frigida chloroplast
56NC_021101TCCGG3965789659215Francoa sonchifolia plastid
57NC_021423TCCGG3959749598815Catharanthus roseus cultivar Pacifica Punch Halo chloroplast
58NC_021425TCCGG3988309884415Tetracentron sinense chloroplast
59NC_021426TCCGG3999609997415Trochodendron aralioides chloroplast
60NC_021455TCCGG3957769579015Prinsepia utilis plastid
61NC_000932TCCGG3947689478215 Arabidopsis thaliana chloroplast
62NC_004993TCCGG3959029591615 Calycanthus floridus var. glaucus chloroplast
63NC_006050TCCGG310044410045815 Nymphaea alba chloroplast
64NC_006290TCCGG3958069582015 Panax ginseng chloroplast
65NC_007578TCCGG3940629407615 Lactuca sativa chloroplast
66NC_007944TCCGG3993679938115 Gossypium hirsutum chloroplast
67NC_007957TCCGG3997609977415 Vitis vinifera chloroplast
68NC_007977TCCGG3930939310715 Helianthus annuus chloroplast
69NC_008115TCCGG3994659947915 Eucalyptus globulus subsp. globulus chloroplast
70NC_008235TCCGG3956879570115 Populus alba chloroplast
71NC_008325TCCGG3938079382115 Daucus carota chloroplast
72NC_008326TCCGG3986579867115 Liriodendron tulipifera chloroplast
73NC_008334TCCGG3988879890115 Citrus sinensis chloroplast
74NC_008335TCCGG310216410217815 Platanus occidentalis chloroplast
75NC_008336TCCGG3960509606415 Nandina domestica chloroplast
76NC_008359TCCGG3975099752315 Morus indica chloroplast
77NC_008407TCCGG310229710231115 Jasminum nudiflorum chloroplast
78NC_008454TCCGG318449218450615 Pelargonium x hortorum chloroplast
79NC_008456TCCGG3996269964015 Drimys granadensis chloroplast
80NC_008535TCCGG3954369545015 Coffea arabica chloroplast
81NC_008641TCCGG3993979941115 Gossypium barbadense chloroplast
82NC_009143TCCGG3962089622215 Populus trichocarpa chloroplast
83NC_009265TCCGG3940219403515 Aethionema cordifolium chloroplast
84NC_009266TCCGG3940619407515 Aethionema grandiflorum chloroplast
85NC_009267TCCGG3944699448315 Olimarabidopsis pumila chloroplast
86NC_009268TCCGG3934169343015 Arabis hirsuta chloroplast
87NC_009269TCCGG3940179403115 Barbarea verna chloroplast
88NC_009270TCCGG3943129432615 Capsella bursa-pastoris chloroplast
89NC_009271TCCGG3947169473015 Crucihimalaya wallichii chloroplast
90NC_009272TCCGG3929929300615 Draba nemorosa chloroplast
91NC_009273TCCGG3945999461315 Lepidium virginicum chloroplast
92NC_009274TCCGG3929909300415 Lobularia maritima chloroplast
93NC_009275TCCGG3948619487515 Nasturtium officinale chloroplast
94NC_009598TCCGG3971319714515 Chloranthus spicatus chloroplast
95NC_009600TCCGG3979249793815 Illicium oligandrum chloroplast
96NC_009601TCCGG3932769329015 Dioscorea elephantipes chloroplast
97NC_010323TCCGG3994209943415 Carica papaya chloroplast
98NC_010433TCCGG310016510017915 Manihot esculenta chloroplast
99NC_010601TCCGG3935269354015 Guizotia abyssinica chloroplast
100NC_012224TCCGG310224510225915 Jatropha curcas chloroplast
101NC_012615TCCGG3989769899015 Megaleranthis saniculifolia chloroplast
102NC_013553TCCGG3946159462915 Parthenium argentatum chloroplast
103NC_013823TCCGG310033710035115 Typha latifolia chloroplast
104NC_013991TCCGG3973419735515 Phoenix dactylifera chloroplast
105NC_013707TCCGG3967689678215 Olea europaea chloroplast