Chloroplast Motifs - Imperfect AATAA Repeats
S.No | Sequence ID | Motif | Iterations | Start | End | Tract Length | Sequence Name |
---|---|---|---|---|---|---|---|
1 | NC_015891 | AATAA | 5 | 8004 | 8027 | 24 | Spirodela polyrhiza chloroplast |
2 | NC_008334 | AATAA | 5 | 144465 | 144489 | 25 | Citrus sinensis chloroplast |
3 | NC_015206 | AATAA | 4 | 60092 | 60111 | 20 | Fragaria vesca subsp. vesca chloroplast |
4 | NC_016468 | AATAA | 4 | 43078 | 43096 | 19 | Boea hygrometrica chloroplast |
5 | NC_018766 | AATAA | 4 | 60125 | 60144 | 20 | Fragaria vesca subsp. bracteata chloroplast |
6 | NC_019602 | AATAA | 4 | 60086 | 60105 | 20 | Fragaria virginiana chloroplast |
7 | NC_021423 | AATAA | 4 | 51984 | 52003 | 20 | Catharanthus roseus cultivar Pacifica Punch Halo chloroplast |
8 | NC_021426 | AATAA | 4 | 4899 | 4917 | 19 | Trochodendron aralioides chloroplast |
9 | NC_011031 | AATAA | 4 | 180296 | 180314 | 19 | Oedogonium cardiacum chloroplast |
10 | NC_012052 | AATAA | 4 | 83994 | 84014 | 21 | Syntrichia ruralis chloroplast |
11 | NC_011087 | AATAA | 3 | 166611 | 166625 | 15 | Paulinella chromatophora chromatophore |
12 | NC_014340 | AATAA | 3 | 24599 | 24613 | 15 | Chromera velia strain CCMP2878 chloroplast |
13 | NC_014570 | AATAA | 3 | 9116 | 9130 | 15 | Eucalyptus grandis chloroplast |
14 | NC_014808 | AATAA | 3 | 109040 | 109053 | 14 | Thalassiosira oceanica CCMP1005 chloroplast |
15 | NC_015113 | AATAA | 3 | 55923 | 55937 | 15 | Anthriscus cerefolium chloroplast |
16 | NC_015139 | AATAA | 3 | 116348 | 116362 | 15 | Brassica rapa subsp. pekinensis chloroplast |
17 | NC_015206 | AATAA | 3 | 60501 | 60515 | 15 | Fragaria vesca subsp. vesca chloroplast |
18 | NC_015610 | AATAA | 3 | 70286 | 70299 | 14 | Nelumbo nucifera chloroplast |
19 | NC_015891 | AATAA | 3 | 137052 | 137066 | 15 | Spirodela polyrhiza chloroplast |
20 | NC_015891 | AATAA | 3 | 153693 | 153707 | 15 | Spirodela polyrhiza chloroplast |
21 | NC_015894 | AATAA | 3 | 154393 | 154407 | 15 | Wolffiella lingulata chloroplast |
22 | NC_016668 | AATAA | 3 | 128228 | 128241 | 14 | Gossypium raimondii chloroplast |
23 | NC_016730 | AATAA | 3 | 199 | 213 | 15 | Silene latifolia chloroplast |
24 | NC_016734 | AATAA | 3 | 115881 | 115894 | 14 | Brassica napus chloroplast |
25 | NC_017894 | AATAA | 3 | 128301 | 128314 | 14 | Gossypium gossypioides chloroplast |
26 | NC_018051 | AATAA | 3 | 7279 | 7293 | 15 | Vigna unguiculata chloroplast |
27 | NC_018565 | AATAA | 3 | 117449 | 117463 | 15 | Pachycladon enysii chloroplast |
28 | NC_018766 | AATAA | 3 | 60531 | 60545 | 15 | Fragaria vesca subsp. bracteata chloroplast |
29 | NC_019628 | AATAA | 3 | 9478 | 9491 | 14 | Pellia endiviifolia chloroplast |
30 | NC_020018 | AATAA | 3 | 56550 | 56563 | 14 | Monomorphina aenigmatica strain UTEX1284 chloroplast |
31 | NC_020363 | AATAA | 3 | 67017 | 67030 | 14 | Zingiber spectabile plastid |
32 | NC_020363 | AATAA | 3 | 72196 | 72210 | 15 | Zingiber spectabile plastid |
33 | NC_020460 | AATAA | 3 | 83450 | 83464 | 15 | Euglena viridis culture-collection ATCC:PRA110 chloroplast |
34 | NC_021091 | AATAA | 3 | 7333 | 7347 | 15 | Vigna angularis chloroplast DNA |
35 | NC_021111 | AATAA | 3 | 98053 | 98066 | 14 | Cistanche deserticola chloroplast |
36 | NC_021437 | AATAA | 3 | 62380 | 62393 | 14 | Cunninghamia lanceolata chloroplast |
37 | NC_021437 | AATAA | 3 | 94364 | 94377 | 14 | Cunninghamia lanceolata chloroplast |
38 | NC_021449 | AATAA | 3 | 7947 | 7962 | 16 | Utricularia gibba chloroplast |
39 | NC_021646 | AATAA | 3 | 30373 | 30387 | 15 | Glycine stenophita voucher CSIRO:G1974 chloroplast |
40 | NC_021649 | AATAA | 3 | 30479 | 30493 | 15 | Glycine falcata voucher CSIRO:G1718 chloroplast |
41 | NC_021650 | AATAA | 3 | 30443 | 30457 | 15 | Glycine syndetika voucher CSIRO:G1300 chloroplast |
42 | NC_022136 | AATAA | 3 | 112794 | 112808 | 15 | Lygodium japonicum chloroplast |
43 | NC_000932 | AATAA | 3 | 117262 | 117275 | 14 | Arabidopsis thaliana chloroplast |
44 | NC_001675 | AATAA | 3 | 111930 | 111944 | 15 | Cyanophora paradoxa cyanelle |
45 | NC_005878 | AATAA | 3 | 127115 | 127129 | 15 | Saccharum hybrid cultivar SP-80-3280 chloroplast |
46 | NC_006084 | AATAA | 3 | 65488 | 65502 | 15 | Saccharum hybrid cultivar NCo 310 chloroplast |
47 | NC_007407 | AATAA | 3 | 86914 | 86927 | 14 | Acorus calamus plastid |
48 | NC_008097 | AATAA | 3 | 69141 | 69155 | 15 | Chara vulgaris chloroplast |
49 | NC_008097 | AATAA | 3 | 160822 | 160836 | 15 | Chara vulgaris chloroplast |
50 | NC_008101 | AATAA | 3 | 65234 | 65247 | 14 | Scenedesmus obliquus chloroplast |
51 | NC_008372 | AATAA | 3 | 93046 | 93060 | 15 | Stigeoclonium helveticum chloroplast |
52 | NC_008372 | AATAA | 3 | 205079 | 205093 | 15 | Stigeoclonium helveticum chloroplast |
53 | NC_008588 | AATAA | 3 | 89254 | 89267 | 14 | Phaeodactylum tricornutum chloroplast |
54 | NC_009259 | AATAA | 3 | 64642 | 64656 | 15 | Phaseolus vulgaris chloroplast |
55 | NC_009269 | AATAA | 3 | 117082 | 117096 | 15 | Barbarea verna chloroplast |
56 | NC_009270 | AATAA | 3 | 117113 | 117127 | 15 | Capsella bursa-pastoris chloroplast |
57 | NC_009271 | AATAA | 3 | 117692 | 117706 | 15 | Crucihimalaya wallichii chloroplast |
58 | NC_009273 | AATAA | 3 | 117544 | 117557 | 14 | Lepidium virginicum chloroplast |
59 | NC_009275 | AATAA | 3 | 117677 | 117690 | 14 | Nasturtium officinale chloroplast |
60 | NC_009599 | AATAA | 3 | 28994 | 29007 | 14 | Buxus microphylla chloroplast |
61 | NC_009963 | AATAA | 3 | 25096 | 25110 | 15 | Cuscuta exaltata chloroplast |
62 | NC_009963 | AATAA | 3 | 67288 | 67301 | 14 | Cuscuta exaltata chloroplast |
63 | NC_010093 | AATAA | 3 | 86589 | 86602 | 14 | Acorus americanus chloroplast |
64 | NC_011031 | AATAA | 3 | 187613 | 187628 | 16 | Oedogonium cardiacum chloroplast |
65 | NC_011163 | AATAA | 3 | 69898 | 69911 | 14 | Cicer arietinum chloroplast |
66 | NC_012615 | AATAA | 3 | 33502 | 33516 | 15 | Megaleranthis saniculifolia chloroplast |
67 | NC_013359 | AATAA | 3 | 76443 | 76457 | 15 | Bryopsis hypnoides chloroplast |
68 | NC_013823 | AATAA | 3 | 38402 | 38416 | 15 | Typha latifolia chloroplast |
69 | NC_013843 | AATAA | 3 | 7303 | 7317 | 15 | Vigna radiata chloroplast |