Chloroplast Motifs - Imperfect TAGT Repeats
S.No | Sequence ID | Motif | Iterations | Start | End | Tract Length | Sequence Name |
---|---|---|---|---|---|---|---|
1 | NC_008117 | TAGT | 7 | 39529 | 39556 | 28 | Zygnema circumcarinatum chloroplast |
2 | NC_014267 | TAGT | 4 | 98417 | 98432 | 16 | Kryptoperidinium foliaceum chloroplast |
3 | NC_000925 | TAGT | 4 | 98402 | 98417 | 16 | Porphyra purpurea chloroplast |
4 | NC_011930 | TAGT | 4 | 100964 | 100978 | 15 | Keteleeria davidiana chloroplast |
5 | NC_011087 | TAGT | 3 | 758519 | 758530 | 12 | Paulinella chromatophora chromatophore |
6 | NC_014570 | TAGT | 3 | 50684 | 50694 | 11 | Eucalyptus grandis chloroplast |
7 | NC_014589 | TAGT | 3 | 74778 | 74790 | 13 | Cathaya argyrophylla chloroplast |
8 | NC_014676 | TAGT | 3 | 63089 | 63100 | 12 | Theobroma cacao chloroplast |
9 | NC_015139 | TAGT | 3 | 81674 | 81684 | 11 | Brassica rapa subsp. pekinensis chloroplast |
10 | NC_015204 | TAGT | 3 | 62391 | 62402 | 12 | Gossypium thurberi chloroplast |
11 | NC_015403 | TAGT | 3 | 57009 | 57021 | 13 | Fistulifera sp. JPCC DA0580 chloroplast |
12 | NC_015543 | TAGT | 3 | 143570 | 143580 | 11 | Jacobaea vulgaris chloroplast |
13 | NC_015990 | TAGT | 3 | 12502 | 12512 | 11 | Panicum virgatum chloroplast |
14 | NC_015996 | TAGT | 3 | 124025 | 124035 | 11 | Pyrus pyrifolia chloroplast |
15 | NC_016063 | TAGT | 3 | 48978 | 48988 | 11 | Cephalotaxus wilsoniana chloroplast DNA |
16 | NC_016063 | TAGT | 3 | 102627 | 102637 | 11 | Cephalotaxus wilsoniana chloroplast DNA |
17 | NC_016668 | TAGT | 3 | 62335 | 62346 | 12 | Gossypium raimondii chloroplast |
18 | NC_016670 | TAGT | 3 | 62528 | 62539 | 12 | Gossypium darwinii chloroplast |
19 | NC_016690 | TAGT | 3 | 62551 | 62562 | 12 | Gossypium tomentosum chloroplast |
20 | NC_016692 | TAGT | 3 | 62416 | 62427 | 12 | Gossypium herbaceum subsp. africanum chloroplast |
21 | NC_016708 | TAGT | 3 | 116772 | 116782 | 11 | Millettia pinnata chloroplast |
22 | NC_016711 | TAGT | 3 | 62459 | 62470 | 12 | Gossypium mustelinum chloroplast |
23 | NC_016712 | TAGT | 3 | 62352 | 62363 | 12 | Gossypium arboreum chloroplast |
24 | NC_016734 | TAGT | 3 | 81422 | 81432 | 11 | Brassica napus chloroplast |
25 | NC_016735 | TAGT | 3 | 23935 | 23945 | 11 | Fucus vesiculosus chloroplast |
26 | NC_016986 | TAGT | 3 | 137368 | 137378 | 11 | Ginkgo biloba chloroplast |
27 | NC_017894 | TAGT | 3 | 62383 | 62394 | 12 | Gossypium gossypioides chloroplast |
28 | NC_018109 | TAGT | 3 | 61617 | 61628 | 12 | Gossypium incanum chloroplast |
29 | NC_018110 | TAGT | 3 | 61811 | 61822 | 12 | Gossypium somalense chloroplast |
30 | NC_018111 | TAGT | 3 | 61807 | 61818 | 12 | Gossypium capitis-viridis chloroplast |
31 | NC_018112 | TAGT | 3 | 61835 | 61846 | 12 | Gossypium areysianum chloroplast |
32 | NC_018113 | TAGT | 3 | 62011 | 62022 | 12 | Gossypium robinsonii chloroplast |
33 | NC_020152 | TAGT | 3 | 88766 | 88776 | 11 | Quercus rubra plastid |
34 | NC_020795 | TAGT | 3 | 104695 | 104705 | 11 | Chondrus crispus plastid complete genome |
35 | NC_021101 | TAGT | 3 | 60389 | 60400 | 12 | Francoa sonchifolia plastid |
36 | NC_021110 | TAGT | 3 | 48484 | 48494 | 11 | Cephalotaxus oliveri chloroplast |
37 | NC_021110 | TAGT | 3 | 101562 | 101572 | 11 | Cephalotaxus oliveri chloroplast |
38 | NC_021121 | TAGT | 3 | 7987 | 7998 | 12 | Ardisia polysticta chloroplast |
39 | NC_001799 | TAGT | 3 | 32754 | 32766 | 13 | Toxoplasma gondii RH apicoplast |
40 | NC_004993 | TAGT | 3 | 58223 | 58233 | 11 | Calycanthus floridus var. glaucus chloroplast |
41 | NC_006050 | TAGT | 3 | 29501 | 29511 | 11 | Nymphaea alba chloroplast |
42 | NC_006050 | TAGT | 3 | 50359 | 50370 | 12 | Nymphaea alba chloroplast |
43 | NC_007944 | TAGT | 3 | 62422 | 62433 | 12 | Gossypium hirsutum chloroplast |
44 | NC_008641 | TAGT | 3 | 62472 | 62483 | 12 | Gossypium barbadense chloroplast |
45 | NC_008788 | TAGT | 3 | 29387 | 29397 | 11 | Nuphar advena chloroplast |
46 | NC_009808 | TAGT | 3 | 85216 | 85226 | 11 | Ipomoea purpurea chloroplast |
47 | NC_010442 | TAGT | 3 | 144116 | 144127 | 12 | Trachelium caeruleum chloroplast |
48 | NC_011031 | TAGT | 3 | 119089 | 119103 | 15 | Oedogonium cardiacum chloroplast |
49 | NC_012898 | TAGT | 3 | 29863 | 29875 | 13 | Aureococcus anophagefferens chloroplast |
50 | NC_012903 | TAGT | 3 | 10691 | 10703 | 13 | Aureoumbra lagunensis chloroplast |
51 | NC_013359 | TAGT | 3 | 31787 | 31799 | 13 | Bryopsis hypnoides chloroplast |
52 | NC_013498 | TAGT | 3 | 82756 | 82766 | 11 | Ectocarpus siliculosus chloroplast |
53 | NC_013498 | TAGT | 3 | 100127 | 100138 | 12 | Ectocarpus siliculosus chloroplast |