Chloroplast Motifs - Imperfect CCAA Repeats
| S.No | Sequence ID | Motif | Iterations | Start | End | Tract Length | Sequence Name |
| 1 | NC_019616 | CCAA | 5 | 161044 | 161063 | 20 | Vaccinium macrocarpon plastid |
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| 2 | NC_019616 | CCAA | 5 | 171728 | 171747 | 20 | Vaccinium macrocarpon plastid |
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| 3 | NC_011087 | CCAA | 3 | 120092 | 120103 | 12 | Paulinella chromatophora chromatophore |
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| 4 | NC_014345 | CCAA | 3 | 70260 | 70271 | 12 | Alveolata sp. CCMP3155 chloroplast |
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| 5 | NC_014573 | CCAA | 3 | 135961 | 135972 | 12 | Geranium palmatum plastid |
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| 6 | NC_014573 | CCAA | 3 | 152155 | 152166 | 12 | Geranium palmatum plastid |
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| 7 | NC_014676 | CCAA | 3 | 125485 | 125496 | 12 | Theobroma cacao chloroplast |
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| 8 | NC_016430 | CCAA | 3 | 126051 | 126062 | 12 | Eleutherococcus senticosus chloroplast |
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| 9 | NC_018051 | CCAA | 3 | 76668 | 76678 | 11 | Vigna unguiculata chloroplast |
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| 10 | NC_018552 | CCAA | 3 | 31064 | 31076 | 13 | Capsicum annuum chloroplast |
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| 11 | NC_020146 | CCAA | 3 | 14749 | 14760 | 12 | Equisetum hyemale chloroplast |
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| 12 | NC_020319 | CCAA | 3 | 10701 | 10713 | 13 | Cycas revoluta chloroplast |
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| 13 | NC_020365 | CCAA | 3 | 42417 | 42427 | 11 | Calamus caryotoides plastid |
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| 14 | NC_020367 | CCAA | 3 | 44306 | 44316 | 11 | Dasypogon bromeliifolius plastid |
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| 15 | NC_021091 | CCAA | 3 | 77075 | 77085 | 11 | Vigna angularis chloroplast DNA |
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| 16 | NC_021109 | CCAA | 3 | 31726 | 31736 | 11 | Pleodorina starrii plastid |
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| 17 | NC_021109 | CCAA | 3 | 84586 | 84597 | 12 | Pleodorina starrii plastid |
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| 18 | NC_021109 | CCAA | 3 | 150416 | 150426 | 11 | Pleodorina starrii plastid |
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| 19 | NC_021426 | CCAA | 3 | 130384 | 130395 | 12 | Trochodendron aralioides chloroplast |
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| 20 | NC_021645 | CCAA | 3 | 75700 | 75710 | 11 | Glycine cyrtoloba voucher CSIRO:G1267 chloroplast |
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| 21 | NC_021646 | CCAA | 3 | 76013 | 76023 | 11 | Glycine stenophita voucher CSIRO:G1974 chloroplast |
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| 22 | NC_021649 | CCAA | 3 | 76115 | 76125 | 11 | Glycine falcata voucher CSIRO:G1718 chloroplast |
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| 23 | NC_021936 | CCAA | 3 | 46245 | 46255 | 11 | Najas flexilis chloroplast |
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| 24 | NC_001568 | CCAA | 3 | 28906 | 28917 | 12 | Epifagus virginiana chloroplast |
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| 25 | NC_002202 | CCAA | 3 | 117853 | 117864 | 12 | Spinacia oleracea plastid |
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| 26 | NC_004115 | CCAA | 3 | 109630 | 109641 | 12 | Chaetosphaeridium globosum chloroplast |
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| 27 | NC_006290 | CCAA | 3 | 125494 | 125505 | 12 | Panax ginseng chloroplast |
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| 28 | NC_007942 | CCAA | 3 | 75230 | 75240 | 11 | Glycine max chloroplast |
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| 29 | NC_008099 | CCAA | 3 | 144863 | 144873 | 11 | Oltmannsiellopsis viridis chloroplast |
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| 30 | NC_008114 | CCAA | 3 | 147472 | 147483 | 12 | Pseudendoclonium akinetum chloroplast |
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| 31 | NC_008116 | CCAA | 3 | 81559 | 81570 | 12 | Staurastrum punctulatum chloroplast |
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| 32 | NC_008326 | CCAA | 3 | 128484 | 128495 | 12 | Liriodendron tulipifera chloroplast |
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| 33 | NC_008372 | CCAA | 3 | 203177 | 203189 | 13 | Stigeoclonium helveticum chloroplast |
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| 34 | NC_008588 | CCAA | 3 | 15486 | 15496 | 11 | Phaeodactylum tricornutum chloroplast |
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| 35 | NC_009259 | CCAA | 3 | 75622 | 75632 | 11 | Phaseolus vulgaris chloroplast |
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| 36 | NC_009618 | CCAA | 3 | 148859 | 148871 | 13 | Cycas taitungensis chloroplast |
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| 37 | NC_009962 | CCAA | 3 | 112496 | 112507 | 12 | Ceratophyllum demersum chloroplast |
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| 38 | NC_010323 | CCAA | 3 | 125299 | 125310 | 12 | Carica papaya chloroplast |
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| 39 | NC_012097 | CCAA | 3 | 66152 | 66164 | 13 | Pycnococcus provasolii chloroplast |
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| 40 | NC_012224 | CCAA | 3 | 129235 | 129246 | 12 | Jatropha curcas chloroplast |
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| 41 | NC_013843 | CCAA | 3 | 76692 | 76702 | 11 | Vigna radiata chloroplast |
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