ChloroMitoSSRDB 2.0 Webserver cum Database of Cholorplast and Mitochondrial Microsatellites

Back To Motif Summary

Chloroplast Motifs - Imperfect TTTG Repeats

S.NoSequence IDMotifIterationsStartEndTract LengthSequence Name
1NC_014674TTTG4308213083616Castanea mollissima chloroplast
2NC_015621TTTG4311693118416Ageratina adenophora chloroplast
3NC_015830TTTG4829898300416Bambusa emeiensis chloroplast
4NC_015899TTTG4766177663115Wolffia australiana chloroplast
5NC_020152TTTG4307503076516Quercus rubra plastid
6NC_002693TTTG411924311925715 Oenothera elata subsp. hookeri plastid plastome I
7NC_010360TTTG411916011917415 Oenothera glazioviana chloroplast
8NC_010601TTTG4311173113216 Guizotia abyssinica chloroplast
9NC_011163TTTG4645546456916 Cicer arietinum chloroplast
10NC_012927TTTG4828868290116 Bambusa oldhamii chloroplast
11NC_012978TTTG4394733948816 Parachlorella kessleri chloroplast
12NC_011087TTTG335527735528812Paulinella chromatophora chromatophore
13NC_011087TTTG351129751130812Paulinella chromatophora chromatophore
14NC_011087TTTG367808567809713Paulinella chromatophora chromatophore
15NC_014345TTTG31836184611Alveolata sp. CCMP3155 chloroplast
16NC_014346TTTG3157181572811Floydiella terrestris chloroplast
17NC_014346TTTG311197711198812Floydiella terrestris chloroplast
18NC_014346TTTG316104816105912Floydiella terrestris chloroplast
19NC_014346TTTG319180719181812Floydiella terrestris chloroplast
20NC_014346TTTG319420519421612Floydiella terrestris chloroplast
21NC_014346TTTG330048030049011Floydiella terrestris chloroplast
22NC_014346TTTG335834935835911Floydiella terrestris chloroplast
23NC_014346TTTG339460239461211Floydiella terrestris chloroplast
24NC_014346TTTG339831639832712Floydiella terrestris chloroplast
25NC_014346TTTG349019149020212Floydiella terrestris chloroplast
26NC_014570TTTG3534915350111Eucalyptus grandis chloroplast
27NC_014573TTTG312115612116712Geranium palmatum plastid
28NC_014575TTTG3660726608312Cedrus deodara chloroplast
29NC_014676TTTG3561375614812Theobroma cacao chloroplast
30NC_014676TTTG312437712438711Theobroma cacao chloroplast
31NC_014697TTTG313071113072111Prunus persica chloroplast
32NC_014807TTTG313053613054611Corynocarpus laevigata chloroplast
33NC_015113TTTG312638812639811Anthriscus cerefolium chloroplast
34NC_015139TTTG3125341254512Brassica rapa subsp. pekinensis chloroplast
35NC_015139TTTG312445912446911Brassica rapa subsp. pekinensis chloroplast
36NC_015204TTTG3483824839312Gossypium thurberi chloroplast
37NC_015204TTTG312409912410911Gossypium thurberi chloroplast
38NC_015206TTTG39014902411Fragaria vesca subsp. vesca chloroplast
39NC_015359TTTG3169471695812Chlorella variabilis plastid
40NC_015359TTTG3923099231911Chlorella variabilis plastid
41NC_015401TTTG312642112643212Olea europaea subsp. europaea plastid
42NC_015403TTTG3543515436212Fistulifera sp. JPCC DA0580 chloroplast
43NC_015543TTTG3629636297412Jacobaea vulgaris chloroplast
44NC_015604TTTG312641912643012Olea europaea subsp. cuspidata chloroplast
45NC_015608TTTG312651412652512Olea woodiana subsp. woodiana chloroplast
46NC_015621TTTG3639276393812Ageratina adenophora chloroplast
47NC_015623TTTG312644212645312Olea europaea subsp. maroccana chloroplast
48NC_015645TTTG3731927320211Schizomeris leibleinii chloroplast
49NC_015645TTTG3950729508211Schizomeris leibleinii chloroplast
50NC_015645TTTG311814311815412Schizomeris leibleinii chloroplast
51NC_015645TTTG312423712424711Schizomeris leibleinii chloroplast
52NC_015645TTTG313232913233911Schizomeris leibleinii chloroplast
53NC_015645TTTG314663814664811Schizomeris leibleinii chloroplast
54NC_015830TTTG311262311263412Bambusa emeiensis chloroplast
55NC_015891TTTG3846848469411Spirodela polyrhiza chloroplast
56NC_015894TTTG3307693077911Wolffiella lingulata chloroplast
57NC_015899TTTG32202221312Wolffia australiana chloroplast
58NC_015899TTTG312611612612712Wolffia australiana chloroplast
59NC_015983TTTG312749512750511Cucumis melo subsp. melo chloroplast
60NC_016063TTTG3124831249412Cephalotaxus wilsoniana chloroplast DNA
61NC_016433TTTG312527112528111Sesamum indicum chloroplast
62NC_016468TTTG3557535576412Boea hygrometrica chloroplast
63NC_016468TTTG315041315042311Boea hygrometrica chloroplast
64NC_016670TTTG3484884849912Gossypium darwinii chloroplast
65NC_016690TTTG3485004851112Gossypium tomentosum chloroplast
66NC_016692TTTG3483844839512Gossypium herbaceum subsp. africanum chloroplast
67NC_016703TTTG3837128372312Phaeocystis antarctica strain CCMP1374 plastid
68NC_016708TTTG3634356344612Millettia pinnata chloroplast
69NC_016711TTTG3484454845612Gossypium mustelinum chloroplast
70NC_016712TTTG3483444835512Gossypium arboreum chloroplast
71NC_016718TTTG3338563386611Rhynchoryza subulata plastid
72NC_016727TTTG312359012360112Silene vulgaris chloroplast
73NC_016728TTTG33609362012Silene noctiflora chloroplast
74NC_016728TTTG312427212428312Silene noctiflora chloroplast
75NC_016729TTTG33553356311Silene conica chloroplast
76NC_016730TTTG33565357612Silene latifolia chloroplast
77NC_016730TTTG312375412376512Silene latifolia chloroplast
78NC_016732TTTG37387739812Dunaliella salina chloroplast
79NC_016732TTTG3336793369012Dunaliella salina chloroplast
80NC_016732TTTG3448584486912Dunaliella salina chloroplast
81NC_016732TTTG3656896569911Dunaliella salina chloroplast
82NC_016732TTTG316107416108411Dunaliella salina chloroplast
83NC_016732TTTG319416619417611Dunaliella salina chloroplast
84NC_016732TTTG319498419499411Dunaliella salina chloroplast
85NC_016732TTTG322322922324012Dunaliella salina chloroplast
86NC_016732TTTG322738822739912Dunaliella salina chloroplast
87NC_016732TTTG326159626160611Dunaliella salina chloroplast
88NC_016733TTTG3489774898812Pedinomonas minor chloroplast
89NC_016734TTTG3125411255212Brassica napus chloroplast
90NC_016734TTTG3354563546611Brassica napus chloroplast
91NC_016734TTTG312401412402411Brassica napus chloroplast
92NC_016735TTTG3893788938912Fucus vesiculosus chloroplast
93NC_016736TTTG3549315494212Ricinus communis chloroplast
94NC_016753TTTG32561257212Colocasia esculenta chloroplast
95NC_016927TTTG3135381354811Oryza meridionalis chloroplast
96NC_017602TTTG35510552011Elaeis guineensis chloroplast
97NC_017835TTTG3135361354611Oryza rufipogon chloroplast
98NC_018114TTTG3382373824711Erycina pusilla chloroplast
99NC_018541TTTG3166571666711Elodea canadensis chloroplast
100NC_018541TTTG3245122452211Elodea canadensis chloroplast
101NC_018565TTTG312562012563011Pachycladon enysii chloroplast
102NC_018766TTTG38984899411Fragaria vesca subsp. bracteata chloroplast
103NC_018767TTTG38984899411Fragaria mandshurica plastid
104NC_019601TTTG38989899911Fragaria chiloensis chloroplast
105NC_019602TTTG38989899911Fragaria virginiana chloroplast
106NC_019628TTTG3550505506011Pellia endiviifolia chloroplast
107NC_020014TTTG3625416255212Nannochloropsis gaditana chloroplast
108NC_020014TTTG3701517016212Nannochloropsis gaditana chloroplast
109NC_020014TTTG3953079531711Nannochloropsis gaditana chloroplast
110NC_020092TTTG3629736298412Chrysanthemum x morifolium chloroplast
111NC_020098TTTG315088315089311Tectona grandis chloroplast
112NC_020146TTTG38292830312Equisetum hyemale chloroplast
113NC_020146TTTG3741007411112Equisetum hyemale chloroplast
114NC_020147TTTG3813238133311Ophioglossum californicum chloroplast
115NC_020317TTTG311850311851311Magnolia officinalis subsp. biloba voucher SC001 chloroplast
116NC_020318TTTG311809011810011Magnolia grandiflora voucher NJ016 chloroplast
117NC_020320TTTG3629986300912Chrysanthemum indicum voucher HeN001 chloroplast
118NC_020362TTTG35647565711Heliconia collinsiana plastid
119NC_020363TTTG35498550811Zingiber spectabile plastid
120NC_020364TTTG35502551211Pseudophoenix vinifera plastid
121NC_020366TTTG32105211612Bismarckia nobilis plastid
122NC_020366TTTG35743575311Bismarckia nobilis plastid
123NC_020431TTTG36717672711Salvia miltiorrhiza chloroplast
124NC_020431TTTG3768087681912Salvia miltiorrhiza chloroplast
125NC_020431TTTG312399212400211Salvia miltiorrhiza chloroplast
126NC_020431TTTG314825814826811Salvia miltiorrhiza chloroplast
127NC_020438TTTG3125931260311Gonium pectorale chloroplast
128NC_020438TTTG315131815133013Gonium pectorale chloroplast
129NC_020438TTTG315584315585311Gonium pectorale chloroplast
130NC_020460TTTG3326663267712Euglena viridis culture-collection ATCC:PRA110 chloroplast
131NC_020607TTTG3629806299112Artemisia frigida chloroplast
132NC_020795TTTG3597205973112Chondrus crispus plastid complete genome
133NC_021075TTTG313234813235912Calliarthron tuberculosum chloroplast
134NC_021075TTTG315505515506511Calliarthron tuberculosum chloroplast
135NC_021101TTTG3844288443811Francoa sonchifolia plastid
136NC_021102TTTG312518812519811Pachycladon cheesemanii chloroplast
137NC_021109TTTG310220210221413Pleodorina starrii plastid
138NC_021109TTTG310653710654711Pleodorina starrii plastid
139NC_021109TTTG316326216327211Pleodorina starrii plastid
140NC_021109TTTG323199323200412Pleodorina starrii plastid
141NC_021110TTTG3123811239212Cephalotaxus oliveri chloroplast
142NC_021121TTTG3656956570612Ardisia polysticta chloroplast
143NC_021189TTTG318738718739812Pyropia haitanensis voucher PH-38 chloroplast
144NC_021423TTTG3141801419011Catharanthus roseus cultivar Pacifica Punch Halo chloroplast
145NC_021423TTTG312665112666111Catharanthus roseus cultivar Pacifica Punch Halo chloroplast
146NC_021425TTTG313047113048212Tetracentron sinense chloroplast
147NC_021426TTTG313179913181012Trochodendron aralioides chloroplast
148NC_021429TTTG312733112734212Cymbidium aloifolium voucher KUN:YJB100604 chloroplast
149NC_021430TTTG312599512600612Cymbidium sinense voucher KUN:YJB100605 chloroplast
150NC_021431TTTG312608212609312Cymbidium tortisepalum voucher KUN:HJL091027 chloroplast
151NC_021432TTTG312671812672912Cymbidium tracyanum voucher KUN:YJB100606 chloroplast
152NC_021433TTTG312612412613512Cymbidium mannii voucher KUN:YJB100602 chloroplast
153NC_021437TTTG313511713512812Cunninghamia lanceolata chloroplast
154NC_021438TTTG3158831589412Gnetum montanum chloroplast
155NC_021438TTTG3424564246611Gnetum montanum chloroplast
156NC_021438TTTG3450404505011Gnetum montanum chloroplast
157NC_021438TTTG3528715288212Gnetum montanum chloroplast
158NC_021438TTTG3649346494411Gnetum montanum chloroplast
159NC_021438TTTG3653036531311Gnetum montanum chloroplast
160NC_021438TTTG3673406735112Gnetum montanum chloroplast
161NC_021449TTTG314913514914511Utricularia gibba chloroplast
162NC_021455TTTG3139491395911Prinsepia utilis plastid
163NC_021618TTTG314123914125012Grateloupia taiwanensis plastid
164NC_021618TTTG317745417746411Grateloupia taiwanensis plastid
165NC_021936TTTG3489534896412Najas flexilis chloroplast
166NC_022099TTTG3907529076312Medicago truncatula cultivar Jemalong 2HA plastid
167NC_022099TTTG310573310574412Medicago truncatula cultivar Jemalong 2HA plastid
168NC_022100TTTG3905519056212Medicago truncatula cultivar Borung plastid
169NC_022100TTTG310554010555112Medicago truncatula cultivar Borung plastid
170NC_000926TTTG3815818159212 Guillardia theta chloroplast
171NC_001320TTTG3135361354611 Oryza sativa Japonica Group plastid
172NC_001568TTTG3331643317411 Epifagus virginiana chloroplast
173NC_001568TTTG3669286693811 Epifagus virginiana chloroplast
174NC_001603TTTG3116111162111 Euglena gracilis chloroplast
175NC_001603TTTG3214882149912 Euglena gracilis chloroplast
176NC_001603TTTG3570595707012 Euglena gracilis chloroplast
177NC_001840TTTG3198061981611 Cyanidium caldarium chloroplast
178NC_001865TTTG3125641257613 Chlorella vulgaris chloroplast
179NC_001865TTTG3139271393711 Chlorella vulgaris chloroplast
180NC_001865TTTG3212212123212 Chlorella vulgaris chloroplast
181NC_001865TTTG3357683577912 Chlorella vulgaris chloroplast
182NC_001865TTTG3957809579011 Chlorella vulgaris chloroplast
183NC_001865TTTG3961789618811 Chlorella vulgaris chloroplast
184NC_001865TTTG310069910070911 Chlorella vulgaris chloroplast
185NC_001865TTTG314814214815211 Chlorella vulgaris chloroplast
186NC_002186TTTG36414642613 Mesostigma viride chloroplast
187NC_002652TTTG39689969911 Euglena longa plastid
188NC_002652TTTG3132991331012 Euglena longa plastid
189NC_002652TTTG3212102122112 Euglena longa plastid
190NC_002694TTTG3590915910212 Lotus japonicus chloroplast
191NC_003119TTTG3907529076312 Medicago truncatula chloroplast
192NC_003119TTTG310573310574412 Medicago truncatula chloroplast
193NC_004543TTTG38392840312 Anthoceros formosae chloroplast
194NC_004766TTTG310639010640011 Adiantum capillus-veneris chloroplast
195NC_004799TTTG3944239443412 Cyanidioschyzon merolae strain 10D chloroplast
196NC_004993TTTG313636913638012 Calycanthus floridus var. glaucus chloroplast
197NC_005086TTTG3706727068312 Amborella trichopoda chloroplast
198NC_005087TTTG3332933330412 Physcomitrella patens subsp. patens chloroplast
199NC_005087TTTG3509495096012 Physcomitrella patens subsp. patens chloroplast
200NC_005087TTTG3526715268111 Physcomitrella patens subsp. patens chloroplast
201NC_005353TTTG315693515694511 Chlamydomonas reinhardtii chloroplast
202NC_005973TTTG3134751348511 Oryza nivara chloroplast
203NC_006050TTTG313022313023513 Nymphaea alba chloroplast
204NC_007144TTTG311452211453211 Cucumis sativus chloroplast
205NC_007144TTTG312711312712311 Cucumis sativus chloroplast
206NC_007407TTTG3640656407612 Acorus calamus plastid
207NC_007578TTTG3641436415412 Lactuca sativa chloroplast
208NC_007944TTTG3484084841912 Gossypium hirsutum chloroplast
209NC_007977TTTG3636356364612 Helianthus annuus chloroplast
210NC_008101TTTG3157781578811 Scenedesmus obliquus chloroplast
211NC_008101TTTG3189521896312 Scenedesmus obliquus chloroplast
212NC_008101TTTG3195551956511 Scenedesmus obliquus chloroplast
213NC_008101TTTG3197721978312 Scenedesmus obliquus chloroplast
214NC_008101TTTG3201192012911 Scenedesmus obliquus chloroplast
215NC_008101TTTG3211912120111 Scenedesmus obliquus chloroplast
216NC_008101TTTG310271910273012 Scenedesmus obliquus chloroplast
217NC_008101TTTG311651911652911 Scenedesmus obliquus chloroplast
218NC_008101TTTG312148512149612 Scenedesmus obliquus chloroplast
219NC_008101TTTG313411513412612 Scenedesmus obliquus chloroplast
220NC_008101TTTG314312414313512 Scenedesmus obliquus chloroplast
221NC_008101TTTG315908915909911 Scenedesmus obliquus chloroplast
222NC_008114TTTG3894468945712 Pseudendoclonium akinetum chloroplast
223NC_008115TTTG3535795358911 Eucalyptus globulus subsp. globulus chloroplast
224NC_008116TTTG3867438675311 Staurastrum punctulatum chloroplast
225NC_008116TTTG3889158892612 Staurastrum punctulatum chloroplast
226NC_008116TTTG313917413918411 Staurastrum punctulatum chloroplast
227NC_008116TTTG314249914251113 Staurastrum punctulatum chloroplast
228NC_008117TTTG3397043971512 Zygnema circumcarinatum chloroplast
229NC_008155TTTG3134721348211 Oryza sativa Indica Group chloroplast
230NC_008325TTTG312664112665111 Daucus carota chloroplast
231NC_008326TTTG311831911832911 Liriodendron tulipifera chloroplast
232NC_008334TTTG39897990711 Citrus sinensis chloroplast
233NC_008334TTTG3556395564911 Citrus sinensis chloroplast
234NC_008334TTTG3680816809212 Citrus sinensis chloroplast
235NC_008336TTTG312707212708312 Nandina domestica chloroplast
236NC_008372TTTG3296642967512 Stigeoclonium helveticum chloroplast
237NC_008372TTTG311385411386512 Stigeoclonium helveticum chloroplast
238NC_008372TTTG312268112269111 Stigeoclonium helveticum chloroplast
239NC_008372TTTG318266818267912 Stigeoclonium helveticum chloroplast
240NC_008408TTTG3684206843112 Bigelowiella natans plastid
241NC_008456TTTG3349363494611 Drimys granadensis chloroplast
242NC_008457TTTG32221223212 Piper cenocladum chloroplast
243NC_008535TTTG312637912638911 Coffea arabica chloroplast
244NC_008588TTTG3361283613912 Phaeodactylum tricornutum chloroplast
245NC_008641TTTG3484644847512 Gossypium barbadense chloroplast
246NC_008641TTTG312419812420811 Gossypium barbadense chloroplast
247NC_008796TTTG3458494586012 Ranunculus macranthus chloroplast
248NC_008796TTTG312606112607212 Ranunculus macranthus chloroplast
249NC_008822TTTG3781847819411 Chlorokybus atmophyticus chloroplast
250NC_009267TTTG312542712543711 Olimarabidopsis pumila chloroplast
251NC_009269TTTG312521712522711 Barbarea verna chloroplast
252NC_009270TTTG312522412523411 Capsella bursa-pastoris chloroplast
253NC_009271TTTG312586112587111 Crucihimalaya wallichii chloroplast
254NC_009274TTTG312354412355411 Lobularia maritima chloroplast
255NC_009573TTTG3730577306711 Rhodomonas salina chloroplast
256NC_009598TTTG3692156922612 Chloranthus spicatus chloroplast
257NC_009601TTTG3153351534511 Dioscorea elephantipes chloroplast
258NC_009601TTTG3220632207412 Dioscorea elephantipes chloroplast
259NC_009765TTTG3446914470111 Cuscuta gronovii chloroplast
260NC_009766TTTG310358010359011 Cuscuta reflexa chloroplast
261NC_009949TTTG3658346584411 Cuscuta obtusiflora chloroplast
262NC_009962TTTG311461911462911 Ceratophyllum demersum chloroplast
263NC_009963TTTG310748210749211 Cuscuta exaltata chloroplast
264NC_010093TTTG3637416375212 Acorus americanus chloroplast
265NC_010433TTTG311983611984712 Manihot esculenta chloroplast
266NC_010433TTTG313073113074111 Manihot esculenta chloroplast
267NC_010548TTTG3954369544712 Cryptomeria japonica chloroplast
268NC_010601TTTG3636686367912 Guizotia abyssinica chloroplast
269NC_010654TTTG37483749311 Welwitschia mirabilis chloroplast
270NC_010654TTTG3166781668912 Welwitschia mirabilis chloroplast
271NC_010654TTTG3647316474212 Welwitschia mirabilis chloroplast
272NC_010654TTTG311608511609511 Welwitschia mirabilis chloroplast
273NC_010776TTTG34826483712 Fagopyrum esculentum subsp. ancestrale chloroplast
274NC_011031TTTG3436564366712 Oedogonium cardiacum chloroplast
275NC_011031TTTG3673746738411 Oedogonium cardiacum chloroplast
276NC_011031TTTG311673711674711 Oedogonium cardiacum chloroplast
277NC_011031TTTG317444017445011 Oedogonium cardiacum chloroplast
278NC_011600TTTG3744177442711 Vaucheria litorea chloroplast
279NC_011942TTTG39803981412 Gnetum parvifolium chloroplast
280NC_011942TTTG3761397614911 Gnetum parvifolium chloroplast
281NC_011942TTTG3784967850611 Gnetum parvifolium chloroplast
282NC_011942TTTG310947010948011 Gnetum parvifolium chloroplast
283NC_011954TTTG3392333924311 Ephedra equisetina chloroplast
284NC_011954TTTG3612106122112 Ephedra equisetina chloroplast
285NC_011954TTTG3867928680312 Ephedra equisetina chloroplast
286NC_012052TTTG3526625267211 Syntrichia ruralis chloroplast
287NC_012052TTTG3566105662112 Syntrichia ruralis chloroplast
288NC_012101TTTG39435944612 Monomastix sp. OKE-1 chloroplast
289NC_012101TTTG3586655867511 Monomastix sp. OKE-1 chloroplast
290NC_012224TTTG3722657227511 Jatropha curcas chloroplast
291NC_012575TTTG3486994870911 Micromonas sp. RCC299 chloroplast
292NC_012927TTTG311249111250212 Bambusa oldhamii chloroplast
293NC_012978TTTG3190681907811 Parachlorella kessleri chloroplast
294NC_012978TTTG3277482775811 Parachlorella kessleri chloroplast
295NC_012978TTTG3422254223511 Parachlorella kessleri chloroplast
296NC_012978TTTG3717407175011 Parachlorella kessleri chloroplast
297NC_012978TTTG310063210064211 Parachlorella kessleri chloroplast
298NC_012978TTTG311570011571011 Parachlorella kessleri chloroplast
299NC_012978TTTG312213312214311 Parachlorella kessleri chloroplast
300NC_013086TTTG3798477985711 Selaginella moellendorffii plastid
301NC_013088TTTG311256111257212 Dendrocalamus latiflorus chloroplast
302NC_013359TTTG3455174552812 Bryopsis hypnoides chloroplast
303NC_013359TTTG310809610810611 Bryopsis hypnoides chloroplast
304NC_013359TTTG311241511242612 Bryopsis hypnoides chloroplast
305NC_013498TTTG3120181202811 Ectocarpus siliculosus chloroplast
306NC_013553TTTG3645606457112 Parthenium argentatum chloroplast
307NC_013703TTTG3128731288412 Cryptomonas paramecium plastid
308NC_013703TTTG3161601617112 Cryptomonas paramecium plastid
309NC_013991TTTG35542555211 Phoenix dactylifera chloroplast
310NC_014056TTTG3368153682511 Oncidium Gower Ramsey chloroplast
311NC_014057TTTG3144351444612 Pisum sativum chloroplast
312NC_014063TTTG3131721318211 Lathyrus sativus chloroplast
313NC_013707TTTG312641112642212 Olea europaea chloroplast