Chloroplast Motifs - Imperfect ATCG Repeats
S.No | Sequence ID | Motif | Iterations | Start | End | Tract Length | Sequence Name |
---|---|---|---|---|---|---|---|
1 | NC_018112 | ATCG | 3 | 92629 | 92641 | 13 | Gossypium areysianum chloroplast |
2 | NC_020438 | ATCG | 3 | 50203 | 50214 | 12 | Gonium pectorale chloroplast |
3 | NC_020438 | ATCG | 3 | 27263 | 27274 | 12 | Gonium pectorale chloroplast |
4 | NC_020431 | ATCG | 3 | 87138 | 87150 | 13 | Salvia miltiorrhiza chloroplast |
5 | NC_020319 | ATCG | 3 | 162226 | 162237 | 12 | Cycas revoluta chloroplast |
6 | NC_020319 | ATCG | 3 | 116142 | 116153 | 12 | Cycas revoluta chloroplast |
7 | NC_013707 | ATCG | 3 | 91005 | 91017 | 13 | Olea europaea chloroplast |
8 | NC_020319 | ATCG | 3 | 81 | 92 | 12 | Cycas revoluta chloroplast |
9 | NC_020019 | ATCG | 3 | 91111 | 91123 | 13 | Camellia sinensis chloroplast |
10 | NC_018541 | ATCG | 3 | 146890 | 146900 | 11 | Elodea canadensis chloroplast |
11 | NC_018113 | ATCG | 3 | 92933 | 92945 | 13 | Gossypium robinsonii chloroplast |
12 | NC_018111 | ATCG | 3 | 92511 | 92523 | 13 | Gossypium capitis-viridis chloroplast |
13 | NC_018110 | ATCG | 3 | 92597 | 92609 | 13 | Gossypium somalense chloroplast |
14 | NC_018109 | ATCG | 3 | 92314 | 92326 | 13 | Gossypium incanum chloroplast |
15 | NC_017894 | ATCG | 3 | 93235 | 93247 | 13 | Gossypium gossypioides chloroplast |
16 | NC_016986 | ATCG | 3 | 59198 | 59210 | 13 | Ginkgo biloba chloroplast |
17 | NC_009618 | ATCG | 3 | 138231 | 138242 | 12 | Cycas taitungensis chloroplast |
18 | NC_014063 | ATCG | 3 | 88004 | 88015 | 12 | Lathyrus sativus chloroplast |
19 | NC_013086 | ATCG | 3 | 97945 | 97956 | 12 | Selaginella moellendorffii plastid |
20 | NC_013086 | ATCG | 3 | 93914 | 93924 | 11 | Selaginella moellendorffii plastid |
21 | NC_012575 | ATCG | 3 | 25716 | 25726 | 11 | Micromonas sp. RCC299 chloroplast |
22 | NC_011930 | ATCG | 3 | 12146 | 12158 | 13 | Keteleeria davidiana chloroplast |
23 | NC_011163 | ATCG | 3 | 92380 | 92392 | 13 | Cicer arietinum chloroplast |
24 | NC_010362 | ATCG | 3 | 91883 | 91895 | 13 | Oenothera parviflora chloroplast |
25 | NC_010361 | ATCG | 3 | 93102 | 93114 | 13 | Oenothera biennis chloroplast |
26 | NC_010360 | ATCG | 3 | 93877 | 93889 | 13 | Oenothera glazioviana chloroplast |
27 | NC_010358 | ATCG | 3 | 92791 | 92803 | 13 | Oenothera argillicola chloroplast |
28 | NC_021121 | ATCG | 3 | 90548 | 90560 | 13 | Ardisia polysticta chloroplast |
29 | NC_009618 | ATCG | 3 | 92135 | 92146 | 12 | Cycas taitungensis chloroplast |
30 | NC_008641 | ATCG | 3 | 93267 | 93279 | 13 | Gossypium barbadense chloroplast |
31 | NC_008535 | ATCG | 3 | 89652 | 89664 | 13 | Coffea arabica chloroplast |
32 | NC_008407 | ATCG | 3 | 96600 | 96612 | 13 | Jasminum nudiflorum chloroplast |
33 | NC_007944 | ATCG | 3 | 93237 | 93249 | 13 | Gossypium hirsutum chloroplast |
34 | NC_002694 | ATCG | 3 | 86662 | 86674 | 13 | Lotus japonicus chloroplast |
35 | NC_002693 | ATCG | 3 | 93596 | 93608 | 13 | Oenothera elata subsp. hookeri plastid plastome I |
36 | NC_021423 | ATCG | 3 | 139941 | 139951 | 11 | Catharanthus roseus cultivar Pacifica Punch Halo chloroplast |
37 | NC_015204 | ATCG | 3 | 93182 | 93194 | 13 | Gossypium thurberi chloroplast |
38 | NC_015623 | ATCG | 3 | 91038 | 91050 | 13 | Olea europaea subsp. maroccana chloroplast |
39 | NC_015608 | ATCG | 3 | 91124 | 91136 | 13 | Olea woodiana subsp. woodiana chloroplast |
40 | NC_015604 | ATCG | 3 | 91027 | 91039 | 13 | Olea europaea subsp. cuspidata chloroplast |
41 | NC_015402 | ATCG | 3 | 30826 | 30836 | 11 | Ptilidium pulcherrimum chloroplast |
42 | NC_015401 | ATCG | 3 | 91019 | 91031 | 13 | Olea europaea subsp. europaea plastid |
43 | NC_014676 | ATCG | 3 | 93804 | 93816 | 13 | Theobroma cacao chloroplast |
44 | NC_014592 | ATCG | 3 | 24033 | 24044 | 12 | Cheilanthes lindheimeri chloroplast |
45 | NC_014287 | ATCG | 3 | 91830 | 91840 | 11 | Durinskia baltica chloroplast |
46 | NC_011087 | ATCG | 3 | 295766 | 295776 | 11 | Paulinella chromatophora chromatophore |
47 | NC_016729 | ATCG | 3 | 82474 | 82486 | 13 | Silene conica chloroplast |
48 | NC_016728 | ATCG | 3 | 82188 | 82200 | 13 | Silene noctiflora chloroplast |
49 | NC_016727 | ATCG | 3 | 86045 | 86057 | 13 | Silene vulgaris chloroplast |
50 | NC_016712 | ATCG | 3 | 93146 | 93158 | 13 | Gossypium arboreum chloroplast |
51 | NC_016711 | ATCG | 3 | 93243 | 93255 | 13 | Gossypium mustelinum chloroplast |
52 | NC_016708 | ATCG | 3 | 88106 | 88118 | 13 | Millettia pinnata chloroplast |
53 | NC_016703 | ATCG | 3 | 13146 | 13157 | 12 | Phaeocystis antarctica strain CCMP1374 plastid |
54 | NC_016692 | ATCG | 3 | 93214 | 93226 | 13 | Gossypium herbaceum subsp. africanum chloroplast |
55 | NC_016690 | ATCG | 3 | 93352 | 93364 | 13 | Gossypium tomentosum chloroplast |
56 | NC_016670 | ATCG | 3 | 93326 | 93338 | 13 | Gossypium darwinii chloroplast |
57 | NC_016668 | ATCG | 3 | 93151 | 93163 | 13 | Gossypium raimondii chloroplast |
58 | NC_016730 | ATCG | 3 | 86482 | 86494 | 13 | Silene latifolia chloroplast |