Chloroplast Motifs - Imperfect ATGT Repeats
S.No | Sequence ID | Motif | Iterations | Start | End | Tract Length | Sequence Name |
---|---|---|---|---|---|---|---|
1 | NC_008117 | ATGT | 21 | 105014 | 105095 | 82 | Zygnema circumcarinatum chloroplast |
2 | NC_008117 | ATGT | 11 | 106696 | 106739 | 44 | Zygnema circumcarinatum chloroplast |
3 | NC_008117 | ATGT | 8 | 104967 | 104998 | 32 | Zygnema circumcarinatum chloroplast |
4 | NC_010359 | ATGT | 4 | 41351 | 41366 | 16 | Aneura mirabilis chloroplast |
5 | NC_011087 | ATGT | 3 | 61572 | 61583 | 12 | Paulinella chromatophora chromatophore |
6 | NC_011087 | ATGT | 3 | 422016 | 422026 | 11 | Paulinella chromatophora chromatophore |
7 | NC_014675 | ATGT | 3 | 142028 | 142039 | 12 | Isoetes flaccida chloroplast |
8 | NC_015084 | ATGT | 3 | 55671 | 55682 | 12 | Coccomyxa sp. C-169 plastid |
9 | NC_015206 | ATGT | 3 | 79291 | 79302 | 12 | Fragaria vesca subsp. vesca chloroplast |
10 | NC_015894 | ATGT | 3 | 85296 | 85307 | 12 | Wolffiella lingulata chloroplast |
11 | NC_015899 | ATGT | 3 | 84748 | 84759 | 12 | Wolffia australiana chloroplast |
12 | NC_015983 | ATGT | 3 | 33351 | 33362 | 12 | Cucumis melo subsp. melo chloroplast |
13 | NC_016063 | ATGT | 3 | 81782 | 81792 | 11 | Cephalotaxus wilsoniana chloroplast DNA |
14 | NC_016065 | ATGT | 3 | 107509 | 107519 | 11 | Taiwania cryptomerioides chloroplast DNA |
15 | NC_016732 | ATGT | 3 | 51103 | 51113 | 11 | Dunaliella salina chloroplast |
16 | NC_016735 | ATGT | 3 | 109964 | 109974 | 11 | Fucus vesiculosus chloroplast |
17 | NC_018766 | ATGT | 3 | 79342 | 79353 | 12 | Fragaria vesca subsp. bracteata chloroplast |
18 | NC_018767 | ATGT | 3 | 79345 | 79356 | 12 | Fragaria mandshurica plastid |
19 | NC_019601 | ATGT | 3 | 79267 | 79278 | 12 | Fragaria chiloensis chloroplast |
20 | NC_019602 | ATGT | 3 | 79286 | 79297 | 12 | Fragaria virginiana chloroplast |
21 | NC_019648 | ATGT | 3 | 66974 | 66984 | 11 | Festuca altissima plastid |
22 | NC_019649 | ATGT | 3 | 65360 | 65370 | 11 | Festuca ovina plastid |
23 | NC_019650 | ATGT | 3 | 67071 | 67081 | 11 | Festuca pratensis plastid |
24 | NC_019651 | ATGT | 3 | 67017 | 67027 | 11 | Lolium multiflorum plastid |
25 | NC_020146 | ATGT | 3 | 67776 | 67786 | 11 | Equisetum hyemale chloroplast |
26 | NC_020367 | ATGT | 3 | 128647 | 128658 | 12 | Dasypogon bromeliifolius plastid |
27 | NC_020795 | ATGT | 3 | 57884 | 57895 | 12 | Chondrus crispus plastid complete genome |
28 | NC_021439 | ATGT | 3 | 6945 | 6955 | 11 | Pinus massoniana chloroplast |
29 | NC_021440 | ATGT | 3 | 7778 | 7788 | 11 | Pinus taeda chloroplast |
30 | NC_021441 | ATGT | 3 | 106399 | 106409 | 11 | Taiwania flousiana chloroplast |
31 | NC_021760 | ATGT | 3 | 67986 | 67996 | 11 | Triticum monococcum chloroplast |
32 | NC_021761 | ATGT | 3 | 67757 | 67767 | 11 | Secale cereale chloroplast |
33 | NC_021762 | ATGT | 3 | 67665 | 67675 | 11 | Triticum urartu chloroplast |
34 | NC_022133 | ATGT | 3 | 66771 | 66781 | 11 | Aegilops tauschii chloroplast |
35 | NC_022135 | ATGT | 3 | 66498 | 66508 | 11 | Aegilops speltoides isolate SPE0661 chloroplast |
36 | NC_022136 | ATGT | 3 | 59205 | 59216 | 12 | Lygodium japonicum chloroplast |
37 | NC_000927 | ATGT | 3 | 165074 | 165084 | 11 | Nephroselmis olivacea chloroplast |
38 | NC_000927 | ATGT | 3 | 198862 | 198872 | 11 | Nephroselmis olivacea chloroplast |
39 | NC_001631 | ATGT | 3 | 6896 | 6906 | 11 | Pinus thunbergii chloroplast |
40 | NC_001840 | ATGT | 3 | 93128 | 93139 | 12 | Cyanidium caldarium chloroplast |
41 | NC_002762 | ATGT | 3 | 67384 | 67394 | 11 | Triticum aestivum chloroplast |
42 | NC_004993 | ATGT | 3 | 32419 | 32430 | 12 | Calycanthus floridus var. glaucus chloroplast |
43 | NC_006137 | ATGT | 3 | 19807 | 19817 | 11 | Gracilaria tenuistipitata var. liui chloroplast |
44 | NC_006861 | ATGT | 3 | 66764 | 66774 | 11 | Huperzia lucidula chloroplast |
45 | NC_007144 | ATGT | 3 | 33389 | 33400 | 12 | Cucumis sativus chloroplast |
46 | NC_008117 | ATGT | 3 | 30273 | 30283 | 11 | Zygnema circumcarinatum chloroplast |
47 | NC_008117 | ATGT | 3 | 76967 | 76977 | 11 | Zygnema circumcarinatum chloroplast |
48 | NC_008372 | ATGT | 3 | 18607 | 18617 | 11 | Stigeoclonium helveticum chloroplast |
49 | NC_008590 | ATGT | 3 | 68107 | 68117 | 11 | Hordeum vulgare subsp. vulgare chloroplast |
50 | NC_008788 | ATGT | 3 | 30703 | 30714 | 12 | Nuphar advena chloroplast |
51 | NC_008796 | ATGT | 3 | 31276 | 31287 | 12 | Ranunculus macranthus chloroplast |
52 | NC_009268 | ATGT | 3 | 76558 | 76569 | 12 | Arabis hirsuta chloroplast |
53 | NC_009681 | ATGT | 3 | 68663 | 68673 | 11 | Leptosira terrestris chloroplast |
54 | NC_009950 | ATGT | 3 | 67126 | 67136 | 11 | Lolium perenne chloroplast |
55 | NC_010323 | ATGT | 3 | 17897 | 17907 | 11 | Carica papaya chloroplast |
56 | NC_010359 | ATGT | 3 | 52240 | 52252 | 13 | Aneura mirabilis chloroplast |
57 | NC_011031 | ATGT | 3 | 71577 | 71587 | 11 | Oedogonium cardiacum chloroplast |
58 | NC_011031 | ATGT | 3 | 161970 | 161981 | 12 | Oedogonium cardiacum chloroplast |
59 | NC_011032 | ATGT | 3 | 16950 | 16962 | 13 | Brachypodium distachyon chloroplast |
60 | NC_011032 | ATGT | 3 | 66405 | 66415 | 11 | Brachypodium distachyon chloroplast |
61 | NC_011153 | ATGT | 3 | 6981 | 6991 | 11 | Pinus contorta chloroplast |
62 | NC_011395 | ATGT | 3 | 29499 | 29509 | 11 | Babesia bovis T2Bo apicoplast |
63 | NC_011713 | ATGT | 3 | 67676 | 67686 | 11 | Festuca arundinacea chloroplast |
64 | NC_011954 | ATGT | 3 | 60180 | 60190 | 11 | Ephedra equisetina chloroplast |
65 | NC_012903 | ATGT | 3 | 49061 | 49071 | 11 | Aureoumbra lagunensis chloroplast |