ChloroMitoSSRDB 2.0 Webserver cum Database of Cholorplast and Mitochondrial Microsatellites

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Chloroplast Motifs - Imperfect TTTCTA Repeats

S.NoSequence IDMotifIterationsStartEndTract LengthSequence Name
1NC_009143TTTCTA411098311100624 Populus trichocarpa chloroplast
2NC_001320TTTCTA3173341735219 Oryza sativa Japonica Group plastid
3NC_009143TTTCTA3773027731918 Populus trichocarpa chloroplast
4NC_008591TTTCTA3680866810419 Agrostis stolonifera chloroplast
5NC_008235TTTCTA3768267684318 Populus alba chloroplast
6NC_008155TTTCTA3172911730717 Oryza sativa Indica Group chloroplast
7NC_008155TTTCTA3172691728719 Oryza sativa Indica Group chloroplast
8NC_005973TTTCTA3172971731317 Oryza nivara chloroplast
9NC_005973TTTCTA3172751729319 Oryza nivara chloroplast
10NC_003119TTTCTA311919611921217 Medicago truncatula chloroplast
11NC_001320TTTCTA3173561737217 Oryza sativa Japonica Group plastid
12NC_014348TTTCTA310994610996318Pteridium aquilinum subsp. aquilinum chloroplast
13NC_022100TTTCTA311899511901117Medicago truncatula cultivar Borung plastid
14NC_022099TTTCTA311919611921217Medicago truncatula cultivar Jemalong 2HA plastid
15NC_021423TTTCTA311418011419819Catharanthus roseus cultivar Pacifica Punch Halo chloroplast
16NC_019649TTTCTA3654326545019Festuca ovina plastid
17NC_017835TTTCTA3173581737417Oryza rufipogon chloroplast
18NC_017835TTTCTA3173361735419Oryza rufipogon chloroplast
19NC_016927TTTCTA3173571737317Oryza meridionalis chloroplast
20NC_016753TTTCTA3102531027119Colocasia esculenta chloroplast
21NC_016677TTTCTA3181881820417Leersia tisserantii plastid